RNA–Protein interactions for RNA: ENST00000422074.2

LINC00397-201, long intergenic non-protein coding RNA 397, humanhuman

TSL 3 BASIC

Gene LINC00397, Length 344 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-201ENST00000422074 FAM200AQ8TCP9 573 aa8.47□□□□□ -1.05
LINC00397-201ENST00000422074 HINFPQ9BQA5 517 aa8.47□□□□□ -1.05
LINC00397-201ENST00000422074 OXCT2Q9BYC2 517 aaPredicted RBP8.47□□□□□ -1.05
LINC00397-201ENST00000422074 OIP5O43482 229 aa8.46□□□□□ -1.06
LINC00397-201ENST00000422074 ATG7O95352 703 aa8.46□□□□□ -1.06
LINC00397-201ENST00000422074 RFX1P22670 979 aa8.46□□□□□ -1.06
LINC00397-201ENST00000422074 PHACTR1Q9C0D0 580 aa8.46□□□□□ -1.06
LINC00397-201ENST00000422074 ENAMQ9NRM1 1142 aa8.46□□□□□ -1.06
LINC00397-201ENST00000422074 GDF2Q9UK05 429 aaPredicted RBP8.46□□□□□ -1.06
LINC00397-201ENST00000422074 HCN4Q9Y3Q4 1203 aa8.46□□□□□ -1.06
LINC00397-201ENST00000422074 BMP4P12644 408 aa8.45□□□□□ -1.06
LINC00397-201ENST00000422074 MAP3K10Q02779 954 aa8.45□□□□□ -1.06
LINC00397-201ENST00000422074 KCNMA1Q12791 1236 aa8.45□□□□□ -1.06
LINC00397-201ENST00000422074 ALDH16A1Q8IZ83 802 aa8.45□□□□□ -1.06
LINC00397-201ENST00000422074 RHPN1Q8TCX5 695 aa8.45□□□□□ -1.06
LINC00397-201ENST00000422074 ANKIB1Q9P2G1 1089 aa8.45□□□□□ -1.06
LINC00397-201ENST00000422074 ZMIZ1Q9ULJ6 1067 aa8.45□□□□□ -1.06
LINC00397-201ENST00000422074 NOVA2Q9UNW9 492 aaKnown RBP8.45□□□□□ -1.06
LINC00397-201ENST00000422074 GJA3Q9Y6H8 435 aa8.45□□□□□ -1.06
LINC00397-201ENST00000422074 ARAFP10398 606 aa8.44□□□□□ -1.06
LINC00397-201ENST00000422074 GSK3AP49840 483 aa8.44□□□□□ -1.06
LINC00397-201ENST00000422074 FAM69CQ0P6D2 419 aa8.44□□□□□ -1.06
LINC00397-201ENST00000422074 SWI5Q1ZZU3 235 aa8.44□□□□□ -1.06
LINC00397-201ENST00000422074 CDCA8Q53HL2 280 aa8.44□□□□□ -1.06
LINC00397-201ENST00000422074 LRRC69Q6ZNQ3 347 aa8.44□□□□□ -1.06
LINC00397-201ENST00000422074 GOLGA6L1Q8N7Z2 621 aa8.44□□□□□ -1.06
LINC00397-201ENST00000422074 AVENQ9NQS1 362 aaPredicted RBP8.44□□□□□ -1.06
LINC00397-201ENST00000422074 ACIN1Q9UKV3 1341 aaKnown RBP8.44□□□□□ -1.06
LINC00397-201ENST00000422074 KHNYNO15037 678 aaKnown RBP8.43□□□□□ -1.06
LINC00397-201ENST00000422074 FOXO3O43524 673 aa8.43□□□□□ -1.06
LINC00397-201ENST00000422074 SLCO4C1Q6ZQN7 724 aa8.43□□□□□ -1.06
LINC00397-201ENST00000422074 PBXIP1Q96AQ6 731 aa8.43□□□□□ -1.06
LINC00397-201ENST00000422074 CCDC97Q96F63 343 aaPredicted RBP8.43□□□□□ -1.06
LINC00397-201ENST00000422074 STRN4Q9NRL3 753 aa8.43□□□□□ -1.06
LINC00397-201ENST00000422074 MARK1Q9P0L2 795 aa8.43□□□□□ -1.06
LINC00397-201ENST00000422074 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.42□□□□□ -1.06
LINC00397-201ENST00000422074 DCDC2BA2VCK2 349 aa8.42□□□□□ -1.06
LINC00397-201ENST00000422074 KCNQ4P56696 695 aa8.42□□□□□ -1.06
LINC00397-201ENST00000422074 RTN1Q16799 776 aa8.42□□□□□ -1.06
LINC00397-201ENST00000422074 C1orf229Q6ZS94 237 aaPredicted RBP8.42□□□□□ -1.06
LINC00397-201ENST00000422074 SUSD3Q96L08 255 aa8.42□□□□□ -1.06
LINC00397-201ENST00000422074 NEUROD4Q9HD90 331 aa8.42□□□□□ -1.06
LINC00397-201ENST00000422074 CD33P20138 364 aa8.41□□□□□ -1.06
LINC00397-201ENST00000422074 HIF1AQ16665 826 aa8.41□□□□□ -1.06
LINC00397-201ENST00000422074 CHMP7Q8WUX9 453 aaPredicted RBP8.41□□□□□ -1.06
LINC00397-201ENST00000422074 KLF15Q9UIH9 416 aa8.41□□□□□ -1.06
LINC00397-201ENST00000422074 ARID3CA6NKF2 412 aa8.4□□□□□ -1.06
LINC00397-201ENST00000422074 ZNF468Q5VIY5 522 aaPredicted RBP8.4□□□□□ -1.06
LINC00397-201ENST00000422074 IER5Q5VY09 327 aa8.4□□□□□ -1.06
LINC00397-201ENST00000422074 ZNF280CQ8ND82 737 aa8.4□□□□□ -1.06
LINC00397-201ENST00000422074 GGA1Q9UJY5 639 aa8.4□□□□□ -1.06
LINC00397-201ENST00000422074 SHISA8B8ZZ34 492 aa8.39□□□□□ -1.07
LINC00397-201ENST00000422074 RNF225M0QZC1 329 aaPredicted RBP8.39□□□□□ -1.07
LINC00397-201ENST00000422074 LGR5O75473 907 aa8.39□□□□□ -1.07
LINC00397-201ENST00000422074 EPXP11678 715 aa8.39□□□□□ -1.07
LINC00397-201ENST00000422074 TYRO3Q06418 890 aa8.39□□□□□ -1.07
LINC00397-201ENST00000422074 OCLNQ16625 522 aa8.39□□□□□ -1.07
LINC00397-201ENST00000422074 GALNT6Q8NCL4 622 aa8.39□□□□□ -1.07
LINC00397-201ENST00000422074 EDARADDQ8WWZ3 215 aa8.39□□□□□ -1.07
LINC00397-201ENST00000422074 SCARF2Q96GP6 870 aaPredicted RBP8.39□□□□□ -1.07
LINC00397-201ENST00000422074 MYO19Q96H55 970 aa8.39□□□□□ -1.07
LINC00397-201ENST00000422074 HSH2DQ96JZ2 352 aa8.39□□□□□ -1.07
LINC00397-201ENST00000422074 MDFIQ99750 246 aa8.39□□□□□ -1.07
LINC00397-201ENST00000422074 C1orf115Q9H7X2 142 aa8.39□□□□□ -1.07
LINC00397-201ENST00000422074 MARSP56192 900 aaKnown RBP8.38□□□□□ -1.07
LINC00397-201ENST00000422074 C14orf37Q86TY3 774 aa8.38□□□□□ -1.07
LINC00397-201ENST00000422074 STK32AQ8WU08 396 aa8.38□□□□□ -1.07
LINC00397-201ENST00000422074 DMGDHQ9UI17 866 aaKnown RBP8.38□□□□□ -1.07
LINC00397-201ENST00000422074 HOXB4P17483 251 aaPredicted RBP8.37□□□□□ -1.07
LINC00397-201ENST00000422074 ADH6P28332 368 aa8.37□□□□□ -1.07
LINC00397-201ENST00000422074 SFSWAPQ12872 951 aaKnown RBP8.37□□□□□ -1.07
LINC00397-201ENST00000422074 BTLAQ7Z6A9 289 aa8.37□□□□□ -1.07
LINC00397-201ENST00000422074 NEDD1Q8NHV4 660 aa8.37□□□□□ -1.07
LINC00397-201ENST00000422074 QTRT2Q9H974 415 aaKnown RBP8.37□□□□□ -1.07
LINC00397-201ENST00000422074 BCS1LQ9Y276 419 aa8.37□□□□□ -1.07
LINC00397-201ENST00000422074 DNMT3AQ9Y6K1 912 aaPredicted RBP8.37□□□□□ -1.07
LINC00397-201ENST00000422074 TGFBR3LH3BV60 316 aa8.36□□□□□ -1.07
LINC00397-201ENST00000422074 ERICH6Q7L0X2 663 aa8.36□□□□□ -1.07
LINC00397-201ENST00000422074 CCDC82Q8N4S0 544 aa8.36□□□□□ -1.07
LINC00397-201ENST00000422074 COL26A1Q96A83 441 aa8.36□□□□□ -1.07
LINC00397-201ENST00000422074 NGLY1Q96IV0 654 aa8.36□□□□□ -1.07
LINC00397-201ENST00000422074 CEP63Q96MT8 703 aa8.36□□□□□ -1.07
LINC00397-201ENST00000422074 BRD7Q9NPI1 651 aa8.36□□□□□ -1.07
LINC00397-201ENST00000422074 NEURL1BA8MQ27 555 aa8.35□□□□□ -1.07
LINC00397-201ENST00000422074 RASSF7Q02833 373 aa8.35□□□□□ -1.07
LINC00397-201ENST00000422074 FKBP5Q13451 457 aaPredicted RBP8.35□□□□□ -1.07
LINC00397-201ENST00000422074 TMEM164Q5U3C3 297 aa8.35□□□□□ -1.07
LINC00397-201ENST00000422074 KANK3Q6NY19 840 aa8.35□□□□□ -1.07
LINC00397-201ENST00000422074 FCHSD1Q86WN1 690 aa8.35□□□□□ -1.07
LINC00397-201ENST00000422074 BEND7Q8N7W2 519 aaPredicted RBP8.35□□□□□ -1.07
LINC00397-201ENST00000422074 CLP1Q92989 425 aaKnown RBP8.35□□□□□ -1.07
LINC00397-201ENST00000422074 BTBD6Q96KE9 485 aa8.35□□□□□ -1.07
LINC00397-201ENST00000422074 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.35□□□□□ -1.07
LINC00397-201ENST00000422074 PRR12Q9ULL5 1215 aa8.35□□□□□ -1.07
LINC00397-201ENST00000422074 KCNH4Q9UQ05 1017 aa8.35□□□□□ -1.07
LINC00397-201ENST00000422074 SIN3BO75182 1162 aa8.34□□□□□ -1.07
LINC00397-201ENST00000422074 PPP1R15AO75807 674 aaPredicted RBP8.34□□□□□ -1.07
LINC00397-201ENST00000422074 GRIN2CQ14957 1233 aa8.34□□□□□ -1.07
LINC00397-201ENST00000422074 SLC30A3Q99726 388 aa8.34□□□□□ -1.07
LINC00397-201ENST00000422074 CNTNAP5Q8WYK1 1306 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms