RNA–Protein interactions for RNA: ENST00000421887.2

SFXN1-202, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-202ENST00000421887 EIF4G2P78344 907 aaKnown RBP eCLIP9.53□□□□□ -0.88
SFXN1-202ENST00000421887 GRIK4Q16099 956 aa9.53□□□□□ -0.88
SFXN1-202ENST00000421887 BANK1Q8NDB2 785 aa9.53□□□□□ -0.88
SFXN1-202ENST00000421887 ZNF417Q8TAU3 575 aa9.53□□□□□ -0.88
SFXN1-202ENST00000421887 NACC1Q96RE7 527 aa9.53□□□□□ -0.88
SFXN1-202ENST00000421887 ZNF587Q96SQ5 575 aaPredicted RBP9.53□□□□□ -0.88
SFXN1-202ENST00000421887 SNRKQ9NRH2 765 aa9.53□□□□□ -0.88
SFXN1-202ENST00000421887 CABP1Q9NZU7 370 aa9.53□□□□□ -0.88
SFXN1-202ENST00000421887 ARHGEF11O15085 1522 aa9.52□□□□□ -0.88
SFXN1-202ENST00000421887 CYB5RLQ6IPT4 315 aa9.52□□□□□ -0.89
SFXN1-202ENST00000421887 ZDHHC3Q9NYG2 299 aa9.52□□□□□ -0.89
SFXN1-202ENST00000421887 PARP3Q9Y6F1 533 aa9.51□□□□□ -0.89
SFXN1-202ENST00000421887 C8orf86Q6ZUL3 223 aa9.5□□□□□ -0.89
SFXN1-202ENST00000421887 EFSO43281 561 aa9.49□□□□□ -0.89
SFXN1-202ENST00000421887 LAMC2Q13753 1193 aa9.49□□□□□ -0.89
SFXN1-202ENST00000421887 USP3Q9Y6I4 520 aa9.49□□□□□ -0.89
SFXN1-202ENST00000421887 FANCD2Q9BXW9 1451 aa9.48□□□□□ -0.89
SFXN1-202ENST00000421887 A6NJY4 79 aa9.48□□□□□ -0.89
SFXN1-202ENST00000421887 SOCS7O14512 581 aa9.48□□□□□ -0.89
SFXN1-202ENST00000421887 CDK2AP1O14519 115 aa9.48□□□□□ -0.89
SFXN1-202ENST00000421887 SAMD5Q5TGI4 173 aa9.48□□□□□ -0.89
SFXN1-202ENST00000421887 SIN3BO75182 1162 aa9.47□□□□□ -0.89
SFXN1-202ENST00000421887 COL9A3Q14050 684 aaPredicted RBP9.47□□□□□ -0.89
SFXN1-202ENST00000421887 ZNF295-AS1Q8N0V1 137 aa9.47□□□□□ -0.89
SFXN1-202ENST00000421887 IQSEC3Q9UPP2 1182 aaPredicted RBP9.47□□□□□ -0.89
SFXN1-202ENST00000421887 BTBD11A6QL63 1104 aa9.46□□□□□ -0.9
SFXN1-202ENST00000421887 ALBP02768 609 aa9.46□□□□□ -0.9
SFXN1-202ENST00000421887 TXLNAP40222 546 aa9.46□□□□□ -0.9
SFXN1-202ENST00000421887 LRP8Q14114 963 aa9.46□□□□□ -0.9
SFXN1-202ENST00000421887 TRAPPC3LQ5T215 181 aa9.46□□□□□ -0.9
SFXN1-202ENST00000421887 LRRC69Q6ZNQ3 347 aa9.46□□□□□ -0.9
SFXN1-202ENST00000421887 MICALL1Q8N3F8 863 aa9.46□□□□□ -0.9
SFXN1-202ENST00000421887 TBC1D2BQ9UPU7 963 aa9.46□□□□□ -0.9
SFXN1-202ENST00000421887 STARD13Q9Y3M8 1113 aa9.46□□□□□ -0.9
SFXN1-202ENST00000421887 ADARB2-AS1A8MUL3 147 aa9.45□□□□□ -0.9
SFXN1-202ENST00000421887 TMEM229AB2RXF0 380 aa9.45□□□□□ -0.9
SFXN1-202ENST00000421887 MTFR1Q15390 333 aa9.45□□□□□ -0.9
SFXN1-202ENST00000421887 SLC4A9Q96Q91 983 aa9.45□□□□□ -0.9
SFXN1-202ENST00000421887 MDFIQ99750 246 aa9.45□□□□□ -0.9
SFXN1-202ENST00000421887 NEUROD4Q9HD90 331 aa9.45□□□□□ -0.9
SFXN1-202ENST00000421887 MROH2BQ7Z745 1585 aa9.45□□□□□ -0.9
SFXN1-202ENST00000421887 CHIC2Q9UKJ5 165 aa9.44□□□□□ -0.9
SFXN1-202ENST00000421887 C9orf172C9J069 976 aa9.43□□□□□ -0.9
SFXN1-202ENST00000421887 HYAL3O43820 417 aaPredicted RBP9.43□□□□□ -0.9
SFXN1-202ENST00000421887 H2AFB1P0C5Y9 115 aa9.43□□□□□ -0.9
SFXN1-202ENST00000421887 H2AFB2P0C5Z0 115 aa9.43□□□□□ -0.9
SFXN1-202ENST00000421887 NID1P14543 1247 aa9.43□□□□□ -0.9
SFXN1-202ENST00000421887 SFSWAPQ12872 951 aaKnown RBP9.43□□□□□ -0.9
SFXN1-202ENST00000421887 SLC30A3Q99726 388 aa9.43□□□□□ -0.9
SFXN1-202ENST00000421887 PRDM6Q9NQX0 595 aa9.43□□□□□ -0.9
SFXN1-202ENST00000421887 ADH7P40394 386 aa9.42□□□□□ -0.9
SFXN1-202ENST00000421887 NEUROD2Q15784 382 aa9.42□□□□□ -0.9
SFXN1-202ENST00000421887 MAP7D1Q3KQU3 841 aa9.42□□□□□ -0.9
SFXN1-202ENST00000421887 RAB44Q7Z6P3 723 aaPredicted RBP9.42□□□□□ -0.9
SFXN1-202ENST00000421887 PLPP7Q8NBV4 271 aa9.42□□□□□ -0.9
SFXN1-202ENST00000421887 TNFRSF25Q93038 417 aa9.42□□□□□ -0.9
SFXN1-202ENST00000421887 VAC14Q08AM6 782 aa9.41□□□□□ -0.9
SFXN1-202ENST00000421887 KRTAP9-9Q9BYP9 154 aa9.41□□□□□ -0.9
SFXN1-202ENST00000421887 KRTAP9-4Q9BYQ2 154 aa9.41□□□□□ -0.9
SFXN1-202ENST00000421887 SLC24A1O60721 1099 aa9.4□□□□□ -0.9
SFXN1-202ENST00000421887 NEUROD1Q13562 356 aa9.4□□□□□ -0.9
SFXN1-202ENST00000421887 ADGRE1Q14246 886 aa9.4□□□□□ -0.9
SFXN1-202ENST00000421887 MBTPS1Q14703 1052 aa9.4□□□□□ -0.9
SFXN1-202ENST00000421887 L3MBTL2Q969R5 705 aa9.4□□□□□ -0.9
SFXN1-202ENST00000421887 PRM3Q9NNZ6 103 aa9.4□□□□□ -0.9
SFXN1-202ENST00000421887 SELPP16109 830 aa9.39□□□□□ -0.91
SFXN1-202ENST00000421887 SPEM2Q0P670 501 aa9.39□□□□□ -0.91
SFXN1-202ENST00000421887 TP53INP1Q96A56 240 aa9.39□□□□□ -0.91
SFXN1-202ENST00000421887 ZNF232Q9UNY5 417 aa9.39□□□□□ -0.91
SFXN1-202ENST00000421887 URB2Q14146 1524 aaKnown RBP9.39□□□□□ -0.91
SFXN1-202ENST00000421887 LILRB5O75023 590 aa9.38□□□□□ -0.91
SFXN1-202ENST00000421887 IRF5Q13568 498 aa9.38□□□□□ -0.91
SFXN1-202ENST00000421887 TXNRD3Q86VQ6 643 aa9.38□□□□□ -0.91
SFXN1-202ENST00000421887 ZDHHC1Q8WTX9 485 aa9.38□□□□□ -0.91
SFXN1-202ENST00000421887 GOLGA2P5Q9HBQ8 144 aa9.38□□□□□ -0.91
SFXN1-202ENST00000421887 ARAP1Q96P48 1450 aa9.37□□□□□ -0.91
SFXN1-202ENST00000421887 BACH1O14867 736 aa9.37□□□□□ -0.91
SFXN1-202ENST00000421887 TBC1D8BQ0IIM8 1120 aa9.37□□□□□ -0.91
SFXN1-202ENST00000421887 SHISA2Q6UWI4 295 aa9.37□□□□□ -0.91
SFXN1-202ENST00000421887 KRTAP19-1Q8IUB9 90 aa9.37□□□□□ -0.91
SFXN1-202ENST00000421887 CFTRP13569 1480 aa9.36□□□□□ -0.91
SFXN1-202ENST00000421887 A0A0A0MRY4 1105 aa9.36□□□□□ -0.91
SFXN1-202ENST00000421887 ELNP15502 786 aa9.36□□□□□ -0.91
SFXN1-202ENST00000421887 NOS2P35228 1153 aa9.36□□□□□ -0.91
SFXN1-202ENST00000421887 NRG1Q02297 640 aaPredicted RBP9.36□□□□□ -0.91
SFXN1-202ENST00000421887 C20orf204Q6ZNR8 217 aa9.36□□□□□ -0.91
SFXN1-202ENST00000421887 SCHIP1Q9P0W5 487 aaPredicted RBP9.36□□□□□ -0.91
SFXN1-202ENST00000421887 USP21Q9UK80 565 aa9.36□□□□□ -0.91
SFXN1-202ENST00000421887 CHD1O14646 1710 aa9.36□□□□□ -0.91
SFXN1-202ENST00000421887 WIZO95785 1651 aa9.36□□□□□ -0.91
SFXN1-202ENST00000421887 IFT140Q96RY7 1462 aa9.35□□□□□ -0.91
SFXN1-202ENST00000421887 EML1O00423 815 aa9.35□□□□□ -0.91
SFXN1-202ENST00000421887 TBCELQ5QJ74 424 aa9.35□□□□□ -0.91
SFXN1-202ENST00000421887 PCDHGA11Q9Y5H2 935 aa9.35□□□□□ -0.91
SFXN1-202ENST00000421887 ZNF608Q9ULD9 1512 aaPredicted RBP9.35□□□□□ -0.91
SFXN1-202ENST00000421887 RAC1P63000 192 aa9.34□□□□□ -0.91
SFXN1-202ENST00000421887 SEMA3FQ13275 785 aa9.34□□□□□ -0.91
SFXN1-202ENST00000421887 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.34□□□□□ -0.91
SFXN1-202ENST00000421887 RHPN1Q8TCX5 695 aa9.34□□□□□ -0.91
SFXN1-202ENST00000421887 LENG1Q96BZ8 264 aaPredicted RBP9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms