RNA–Protein interactions for RNA: ENST00000421523.5

HDAC8-212, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-212ENST00000421523 PUS7Q96PZ0 661 aaKnown RBP7.94□□□□□ -1.14
HDAC8-212ENST00000421523 SLC12A5Q9H2X9 1139 aa7.94□□□□□ -1.14
HDAC8-212ENST00000421523 ZNF277Q9NRM2 450 aaPredicted RBP7.94□□□□□ -1.14
HDAC8-212ENST00000421523 GJA3Q9Y6H8 435 aa7.94□□□□□ -1.14
HDAC8-212ENST00000421523 PITPNM2Q9BZ72 1349 aa7.94□□□□□ -1.14
HDAC8-212ENST00000421523 TJP1Q07157 1748 aa7.93□□□□□ -1.14
HDAC8-212ENST00000421523 PHKG2P15735 406 aa7.93□□□□□ -1.14
HDAC8-212ENST00000421523 LMOD1P29536 600 aaPredicted RBP7.93□□□□□ -1.14
HDAC8-212ENST00000421523 NOGQ13253 232 aa7.93□□□□□ -1.14
HDAC8-212ENST00000421523 LAMA3Q16787 3333 aa7.92□□□□□ -1.14
HDAC8-212ENST00000421523 AKAP4Q5JQC9 854 aa7.92□□□□□ -1.14
HDAC8-212ENST00000421523 SYNE4Q8N205 404 aa7.92□□□□□ -1.14
HDAC8-212ENST00000421523 TESK2Q96S53 571 aa7.92□□□□□ -1.14
HDAC8-212ENST00000421523 SAGE1Q9NXZ1 904 aa7.92□□□□□ -1.14
HDAC8-212ENST00000421523 TERF2IPQ9NYB0 399 aa7.92□□□□□ -1.14
HDAC8-212ENST00000421523 PDE6BP35913 854 aa7.91□□□□□ -1.14
HDAC8-212ENST00000421523 EPS15P42566 896 aa7.91□□□□□ -1.14
HDAC8-212ENST00000421523 SOGA3Q5TF21 947 aa7.91□□□□□ -1.14
HDAC8-212ENST00000421523 INTS5Q6P9B9 1019 aaKnown RBP7.91□□□□□ -1.14
HDAC8-212ENST00000421523 OLFM4Q6UX06 510 aa7.91□□□□□ -1.14
HDAC8-212ENST00000421523 IFNL2Q8IZJ0 200 aa7.91□□□□□ -1.14
HDAC8-212ENST00000421523 GPC2Q8N158 579 aa7.91□□□□□ -1.14
HDAC8-212ENST00000421523 HHIPL1Q96JK4 782 aa7.91□□□□□ -1.14
HDAC8-212ENST00000421523 CARD11Q9BXL7 1154 aa7.91□□□□□ -1.14
HDAC8-212ENST00000421523 GLIS2Q9BZE0 524 aaPredicted RBP7.91□□□□□ -1.14
HDAC8-212ENST00000421523 RNF186Q9NXI6 227 aa7.91□□□□□ -1.14
HDAC8-212ENST00000421523 INSRP06213 1382 aa7.91□□□□□ -1.14
HDAC8-212ENST00000421523 COL15A1P39059 1388 aa7.9□□□□□ -1.14
HDAC8-212ENST00000421523 SOS1Q07889 1333 aaPredicted RBP7.9□□□□□ -1.14
HDAC8-212ENST00000421523 HUNKP57058 714 aa7.9□□□□□ -1.14
HDAC8-212ENST00000421523 CCDC93Q567U6 631 aa7.9□□□□□ -1.14
HDAC8-212ENST00000421523 CNKSR1Q969H4 720 aa7.9□□□□□ -1.14
HDAC8-212ENST00000421523 BCL2L12Q9HB09 334 aa7.9□□□□□ -1.14
HDAC8-212ENST00000421523 NARFQ9UHQ1 456 aa7.9□□□□□ -1.14
HDAC8-212ENST00000421523 SPTBN5Q9NRC6 3674 aaKnown RBP7.9□□□□□ -1.15
HDAC8-212ENST00000421523 BCORQ6W2J9 1755 aa7.89□□□□□ -1.15
HDAC8-212ENST00000421523 ARFGEF2Q9Y6D5 1785 aa7.89□□□□□ -1.15
HDAC8-212ENST00000421523 FLT4P35916 1363 aa7.89□□□□□ -1.15
HDAC8-212ENST00000421523 NPHP1O15259 732 aa7.89□□□□□ -1.15
HDAC8-212ENST00000421523 SCNN1DP51172 638 aa7.89□□□□□ -1.15
HDAC8-212ENST00000421523 KIF23Q02241 960 aaPredicted RBP7.89□□□□□ -1.15
HDAC8-212ENST00000421523 FKBP4Q02790 459 aaKnown RBP eCLIP7.89□□□□□ -1.15
HDAC8-212ENST00000421523 BRIP1Q9BX63 1249 aa7.89□□□□□ -1.15
HDAC8-212ENST00000421523 HDAC9Q9UKV0 1011 aa7.89□□□□□ -1.15
HDAC8-212ENST00000421523 AKAP11Q9UKA4 1901 aa7.89□□□□□ -1.15
HDAC8-212ENST00000421523 POTEFA5A3E0 1075 aa7.88□□□□□ -1.15
HDAC8-212ENST00000421523 FZD9O00144 591 aa7.88□□□□□ -1.15
HDAC8-212ENST00000421523 IARSP41252 1262 aaKnown RBP7.88□□□□□ -1.15
HDAC8-212ENST00000421523 MNX1P50219 401 aaPredicted RBP7.88□□□□□ -1.15
HDAC8-212ENST00000421523 CABP4P57796 275 aa7.88□□□□□ -1.15
HDAC8-212ENST00000421523 PRR5LQ6MZQ0 368 aa7.88□□□□□ -1.15
HDAC8-212ENST00000421523 USP50Q70EL3 339 aaPredicted RBP7.88□□□□□ -1.15
HDAC8-212ENST00000421523 PDZRN3Q9UPQ7 1066 aa7.88□□□□□ -1.15
HDAC8-212ENST00000421523 ST20-MTHFSA0A0A6YYL1 179 aa7.87□□□□□ -1.15
HDAC8-212ENST00000421523 FAM155AB1AL88 458 aaPredicted RBP7.87□□□□□ -1.15
HDAC8-212ENST00000421523 ERVV-2B6SEH9 535 aa7.87□□□□□ -1.15
HDAC8-212ENST00000421523 EIF6P56537 245 aaKnown RBP7.87□□□□□ -1.15
HDAC8-212ENST00000421523 PKN2Q16513 984 aaKnown RBP7.87□□□□□ -1.15
HDAC8-212ENST00000421523 NCBP3Q53F19 620 aaKnown RBP7.87□□□□□ -1.15
HDAC8-212ENST00000421523 STYK1Q6J9G0 422 aa7.87□□□□□ -1.15
HDAC8-212ENST00000421523 DNAJC10Q8IXB1 793 aa7.87□□□□□ -1.15
HDAC8-212ENST00000421523 JDP2Q8WYK2 163 aa7.87□□□□□ -1.15
HDAC8-212ENST00000421523 TONSLQ96HA7 1378 aa7.86□□□□□ -1.15
HDAC8-212ENST00000421523 COL4A5P29400 1685 aa7.86□□□□□ -1.15
HDAC8-212ENST00000421523 PPM1GO15355 546 aaPredicted RBP7.86□□□□□ -1.15
HDAC8-212ENST00000421523 SRGNP10124 158 aa7.86□□□□□ -1.15
HDAC8-212ENST00000421523 TBC1D9BQ66K14 1250 aa7.86□□□□□ -1.15
HDAC8-212ENST00000421523 DLK2Q6UY11 383 aa7.86□□□□□ -1.15
HDAC8-212ENST00000421523 CNBD1Q8NA66 436 aa7.86□□□□□ -1.15
HDAC8-212ENST00000421523 MASTLQ96GX5 879 aa7.86□□□□□ -1.15
HDAC8-212ENST00000421523 GGNBP2Q9H3C7 697 aa7.86□□□□□ -1.15
HDAC8-212ENST00000421523 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.86□□□□□ -1.151e-6■■□□□ 14.2
HDAC8-212ENST00000421523 ZBTB1Q9Y2K1 713 aa7.86□□□□□ -1.15
HDAC8-212ENST00000421523 NCAPD2Q15021 1401 aa7.86□□□□□ -1.15
HDAC8-212ENST00000421523 PAPPA2Q9BXP8 1791 aa7.85□□□□□ -1.15
HDAC8-212ENST00000421523 EYSQ5T1H1 3165 aa7.85□□□□□ -1.15
HDAC8-212ENST00000421523 ZNF157P51786 506 aaPredicted RBP7.85□□□□□ -1.15
HDAC8-212ENST00000421523 RGMBQ6NW40 437 aa7.85□□□□□ -1.15
HDAC8-212ENST00000421523 FBXO46Q6PJ61 603 aaPredicted RBP7.85□□□□□ -1.15
HDAC8-212ENST00000421523 CHRDL2Q6WN34 429 aa7.85□□□□□ -1.15
HDAC8-212ENST00000421523 MPNDQ8N594 471 aa7.85□□□□□ -1.15
HDAC8-212ENST00000421523 ZNF296Q8WUU4 475 aaPredicted RBP7.85□□□□□ -1.15
HDAC8-212ENST00000421523 C7orf43Q8WVR3 580 aa7.85□□□□□ -1.15
HDAC8-212ENST00000421523 ANKRD26Q9UPS8 1709 aa7.84□□□□□ -1.15
HDAC8-212ENST00000421523 H0YGN5 161 aa7.84□□□□□ -1.15
HDAC8-212ENST00000421523 ST5P78524 1137 aa7.84□□□□□ -1.15
HDAC8-212ENST00000421523 COL25A1Q9BXS0 654 aaPredicted RBP7.84□□□□□ -1.15
HDAC8-212ENST00000421523 ADARB2Q9NS39 739 aaKnown RBP7.84□□□□□ -1.15
HDAC8-212ENST00000421523 EMILIN1Q9Y6C2 1016 aa7.84□□□□□ -1.15
HDAC8-212ENST00000421523 KIAA0100Q14667 2235 aaKnown RBP7.83□□□□□ -1.16
HDAC8-212ENST00000421523 SCN7AQ01118 1682 aa7.83□□□□□ -1.16
HDAC8-212ENST00000421523 FYB1O15117 783 aa7.83□□□□□ -1.16
HDAC8-212ENST00000421523 SLC24A1O60721 1099 aa7.83□□□□□ -1.16
HDAC8-212ENST00000421523 CANXP27824 592 aaKnown RBP7.83□□□□□ -1.16
HDAC8-212ENST00000421523 RTKN2Q8IZC4 609 aa7.83□□□□□ -1.16
HDAC8-212ENST00000421523 NFATC2IPQ8NCF5 419 aa7.83□□□□□ -1.16
HDAC8-212ENST00000421523 CCDC102AQ96A19 550 aa7.83□□□□□ -1.16
HDAC8-212ENST00000421523 OTUD5Q96G74 571 aa7.83□□□□□ -1.16
HDAC8-212ENST00000421523 CSRNP1Q96S65 589 aa7.83□□□□□ -1.16
HDAC8-212ENST00000421523 EYA1Q99502 592 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms