RNA–Protein interactions for RNA: ENST00000421234.5

LINC00475-204, long intergenic non-protein coding RNA 475, humanhuman

TSL 3

Gene LINC00475, Length 467 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00475-204ENST00000421234 LAMB4A4D0S4 1761 aa17.05■□□□□ 0.32
LINC00475-204ENST00000421234 KCNQ3O43525 872 aa17.05■□□□□ 0.32
LINC00475-204ENST00000421234 WDR43Q15061 677 aaKnown RBP eCLIP17.05■□□□□ 0.32
LINC00475-204ENST00000421234 IER5LQ5T953 404 aa17.05■□□□□ 0.32
LINC00475-204ENST00000421234 NPM2Q86SE8 214 aaKnown RBP17.05■□□□□ 0.32
LINC00475-204ENST00000421234 TRIM35Q9UPQ4 493 aa17.05■□□□□ 0.32
LINC00475-204ENST00000421234 SCN7AQ01118 1682 aa17.04■□□□□ 0.32
LINC00475-204ENST00000421234 USPL1Q5W0Q7 1092 aa17.04■□□□□ 0.32
LINC00475-204ENST00000421234 PRKRIP1Q9H875 184 aaPredicted RBP17.04■□□□□ 0.32
LINC00475-204ENST00000421234 ZNF330Q9Y3S2 320 aaPredicted RBP17.04■□□□□ 0.32
LINC00475-204ENST00000421234 AFDNP55196 1824 aaKnown RBP17.03■□□□□ 0.32
LINC00475-204ENST00000421234 FKBP8Q14318 412 aa17.03■□□□□ 0.32
LINC00475-204ENST00000421234 TAF7Q15545 349 aaPredicted RBP17.03■□□□□ 0.32
LINC00475-204ENST00000421234 KIAA1551Q9HCM1 1747 aa17.03■□□□□ 0.32
LINC00475-204ENST00000421234 C10orf71Q711Q0 1435 aa17.03■□□□□ 0.32
LINC00475-204ENST00000421234 A0A087WZG4 1122 aa17.02■□□□□ 0.32
LINC00475-204ENST00000421234 GRIN3BO60391 1043 aa17.02■□□□□ 0.32
LINC00475-204ENST00000421234 NARFQ9UHQ1 456 aa17.02■□□□□ 0.32
LINC00475-204ENST00000421234 BCORQ6W2J9 1755 aa17.02■□□□□ 0.31
LINC00475-204ENST00000421234 SNRPA1P09661 255 aaKnown RBP17.01■□□□□ 0.31
LINC00475-204ENST00000421234 YBX3P16989 372 aaKnown RBP eCLIP17.01■□□□□ 0.31
LINC00475-204ENST00000421234 PNISRQ8TF01 805 aaKnown RBP17.01■□□□□ 0.31
LINC00475-204ENST00000421234 WWC3Q9ULE0 1092 aa17.01■□□□□ 0.31
LINC00475-204ENST00000421234 BRCA1P38398 1863 aaKnown RBP17.01■□□□□ 0.31
LINC00475-204ENST00000421234 EIF5P55010 431 aaKnown RBP17■□□□□ 0.31
LINC00475-204ENST00000421234 PXDNLA1KZ92 1463 aa16.99■□□□□ 0.31
LINC00475-204ENST00000421234 A1BGP04217 495 aa16.99■□□□□ 0.31
LINC00475-204ENST00000421234 IL6STP40189 918 aaPredicted RBP16.99■□□□□ 0.31
LINC00475-204ENST00000421234 RIPK4P57078 832 aa16.99■□□□□ 0.31
LINC00475-204ENST00000421234 TGFB2P61812 414 aa16.99■□□□□ 0.31
LINC00475-204ENST00000421234 LMOD3Q0VAK6 560 aa16.99■□□□□ 0.31
LINC00475-204ENST00000421234 CCDC146Q8IYE0 955 aa16.99■□□□□ 0.31
LINC00475-204ENST00000421234 SLAIN1Q8ND83 568 aa16.99■□□□□ 0.31
LINC00475-204ENST00000421234 THUMPD2Q9BTF0 503 aaKnown RBP16.99■□□□□ 0.31
LINC00475-204ENST00000421234 MIS18AQ9NYP9 233 aa16.99■□□□□ 0.31
LINC00475-204ENST00000421234 GOLGB1Q14789 3259 aaKnown RBP16.99■□□□□ 0.31
LINC00475-204ENST00000421234 NRXN2Q9P2S2 1712 aa16.99■□□□□ 0.31
LINC00475-204ENST00000421234 PRAMEF22A3QJZ6 481 aa16.98■□□□□ 0.31
LINC00475-204ENST00000421234 ZNF316A6NFI3 1004 aaPredicted RBP16.98■□□□□ 0.31
LINC00475-204ENST00000421234 DDR1Q08345 913 aa16.98■□□□□ 0.31
LINC00475-204ENST00000421234 PCDHB13Q9Y5F0 798 aa16.98■□□□□ 0.31
LINC00475-204ENST00000421234 USP16Q9Y5T5 823 aa16.98■□□□□ 0.31
LINC00475-204ENST00000421234 UTRNP46939 3433 aa16.98■□□□□ 0.31
LINC00475-204ENST00000421234 POLRMTO00411 1230 aaKnown RBP16.97■□□□□ 0.31
LINC00475-204ENST00000421234 ST18O60284 1047 aa16.97■□□□□ 0.31
LINC00475-204ENST00000421234 TM4SF1P30408 202 aa16.97■□□□□ 0.31
LINC00475-204ENST00000421234 TMPOP42166 694 aaKnown RBP16.97■□□□□ 0.31
LINC00475-204ENST00000421234 RUNDC1Q96C34 613 aa16.97■□□□□ 0.31
LINC00475-204ENST00000421234 NFIXQ14938 502 aa16.96■□□□□ 0.31
LINC00475-204ENST00000421234 NEUROD2Q15784 382 aa16.96■□□□□ 0.31
LINC00475-204ENST00000421234 TBC1D2BQ9UPU7 963 aa16.96■□□□□ 0.31
LINC00475-204ENST00000421234 ARFGEF1Q9Y6D6 1849 aa16.96■□□□□ 0.3
LINC00475-204ENST00000421234 A0A0G2JLW4 131 aa16.95■□□□□ 0.3
LINC00475-204ENST00000421234 PIP4K2AP48426 406 aaPredicted RBP16.95■□□□□ 0.3
LINC00475-204ENST00000421234 BICDL1Q6ZP65 573 aa16.95■□□□□ 0.3
LINC00475-204ENST00000421234 BCL2L12Q9HB09 334 aa16.95■□□□□ 0.3
LINC00475-204ENST00000421234 ADAMTS8Q9UP79 889 aa16.95■□□□□ 0.3
LINC00475-204ENST00000421234 RRP7AQ9Y3A4 280 aaKnown RBP16.95■□□□□ 0.3
LINC00475-204ENST00000421234 DPEP1P16444 411 aa16.94■□□□□ 0.3
LINC00475-204ENST00000421234 DZIP3Q86Y13 1208 aaKnown RBP16.94■□□□□ 0.3
LINC00475-204ENST00000421234 TSPYL4Q9UJ04 414 aa16.94■□□□□ 0.3
LINC00475-204ENST00000421234 DLEC1Q9Y238 1755 aa16.94■□□□□ 0.3
LINC00475-204ENST00000421234 SERPINB2P05120 415 aa16.93■□□□□ 0.3
LINC00475-204ENST00000421234 EIF4A1P60842 406 aaKnown RBP16.93■□□□□ 0.3
LINC00475-204ENST00000421234 BCS1LQ9Y276 419 aa16.93■□□□□ 0.3
LINC00475-204ENST00000421234 TBC1D9BQ66K14 1250 aa16.92■□□□□ 0.3
LINC00475-204ENST00000421234 CARMIL3Q8ND23 1372 aa16.91■□□□□ 0.3
LINC00475-204ENST00000421234 NPHP1O15259 732 aa16.91■□□□□ 0.3
LINC00475-204ENST00000421234 GIGYF1O75420 1035 aaPredicted RBP16.91■□□□□ 0.3
LINC00475-204ENST00000421234 CAMTA2O94983 1202 aa16.91■□□□□ 0.3
LINC00475-204ENST00000421234 ZNF784Q8NCA9 323 aaPredicted RBP16.91■□□□□ 0.3
LINC00475-204ENST00000421234 ZNF652Q9Y2D9 606 aa16.91■□□□□ 0.3
LINC00475-204ENST00000421234 ANKRD31Q8N7Z5 1873 aa16.9■□□□□ 0.3
LINC00475-204ENST00000421234 BABAM1Q9NWV8 329 aa16.9■□□□□ 0.3
LINC00475-204ENST00000421234 PIM2Q9P1W9 311 aa16.9■□□□□ 0.3
LINC00475-204ENST00000421234 NUP98P52948 1817 aa16.9■□□□□ 0.3
LINC00475-204ENST00000421234 NBPF26B4DH59 902 aa16.89■□□□□ 0.29
LINC00475-204ENST00000421234 ANP32CO43423 234 aa16.89■□□□□ 0.29
LINC00475-204ENST00000421234 NBPF10Q6P3W6 841 aaKnown RBP16.89■□□□□ 0.29
LINC00475-204ENST00000421234 NBPF15Q8N660 670 aa16.89■□□□□ 0.29
LINC00475-204ENST00000421234 SETDB2Q96T68 719 aa16.89■□□□□ 0.29
LINC00475-204ENST00000421234 LAS1LQ9Y4W2 734 aaKnown RBP16.89■□□□□ 0.29
LINC00475-204ENST00000421234 CACNA1SQ13698 1873 aa16.88■□□□□ 0.29
LINC00475-204ENST00000421234 CHRNA5P30532 468 aa16.88■□□□□ 0.29
LINC00475-204ENST00000421234 CLEC4GQ6UXB4 293 aa16.87■□□□□ 0.29
LINC00475-204ENST00000421234 NGEFQ8N5V2 710 aa16.87■□□□□ 0.29
LINC00475-204ENST00000421234 MYL6BP14649 208 aa16.86■□□□□ 0.29
LINC00475-204ENST00000421234 KCNA3P22001 575 aa16.86■□□□□ 0.29
LINC00475-204ENST00000421234 ST5P78524 1137 aa16.86■□□□□ 0.29
LINC00475-204ENST00000421234 DALRD3Q5D0E6 543 aaKnown RBP16.86■□□□□ 0.29
LINC00475-204ENST00000421234 CNBD1Q8NA66 436 aa16.86■□□□□ 0.29
LINC00475-204ENST00000421234 COL11A2P13942 1736 aaPredicted RBP16.86■□□□□ 0.29
LINC00475-204ENST00000421234 PLCG2P16885 1265 aa16.85■□□□□ 0.29
LINC00475-204ENST00000421234 KIF6Q6ZMV9 814 aa16.85■□□□□ 0.29
LINC00475-204ENST00000421234 ARHGAP27Q6ZUM4 889 aa16.85■□□□□ 0.29
LINC00475-204ENST00000421234 C2CD5Q86YS7 1000 aa16.85■□□□□ 0.29
LINC00475-204ENST00000421234 IFNL1Q8IU54 200 aa16.85■□□□□ 0.29
LINC00475-204ENST00000421234 ERBB4Q15303 1308 aa16.85■□□□□ 0.29
LINC00475-204ENST00000421234 H0YIN7 160 aa16.84■□□□□ 0.29
LINC00475-204ENST00000421234 APAF1O14727 1248 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms