RNA–Protein interactions for RNA: ENST00000420567.7

VAT1-202, Transcript of vesicle amine transport 1, humanhuman

TSL 2 BASIC

Gene VAT1, Length 1,069 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-202ENST00000420567 A0A0G2JLW4 131 aa20.57■□□□□ 0.88
VAT1-202ENST00000420567 YBX3P16989 372 aaKnown RBP eCLIP20.57■□□□□ 0.88
VAT1-202ENST00000420567 C8orf58Q8NAV2 365 aa20.57■□□□□ 0.88
VAT1-202ENST00000420567 SETDB2Q96T68 719 aa20.57■□□□□ 0.88
VAT1-202ENST00000420567 CHPF2Q9P2E5 772 aa20.57■□□□□ 0.88
VAT1-202ENST00000420567 IL16Q14005 1332 aa20.56■□□□□ 0.88
VAT1-202ENST00000420567 MAP3K15Q6ZN16 1313 aa20.56■□□□□ 0.88
VAT1-202ENST00000420567 DPEP1P16444 411 aa20.56■□□□□ 0.88
VAT1-202ENST00000420567 TGFB2P61812 414 aa20.56■□□□□ 0.88
VAT1-202ENST00000420567 CLEC4GQ6UXB4 293 aa20.56■□□□□ 0.88
VAT1-202ENST00000420567 MIER1Q8N108 512 aa20.56■□□□□ 0.88
VAT1-202ENST00000420567 CCDC24Q8N4L8 307 aa20.56■□□□□ 0.88
VAT1-202ENST00000420567 DDX21Q9NR30 783 aaKnown RBP eCLIP20.55■□□□□ 0.88
VAT1-202ENST00000420567 NIP7Q9Y221 180 aaKnown RBP eCLIP20.55■□□□□ 0.88
VAT1-202ENST00000420567 KIAA1551Q9HCM1 1747 aa20.55■□□□□ 0.88
VAT1-202ENST00000420567 NRXN2Q9P2S2 1712 aa20.55■□□□□ 0.88
VAT1-202ENST00000420567 KIF13BQ9NQT8 1826 aa20.55■□□□□ 0.88
VAT1-202ENST00000420567 AIMP1Q12904 312 aaKnown RBP20.54■□□□□ 0.88
VAT1-202ENST00000420567 PRR5LQ6MZQ0 368 aa20.54■□□□□ 0.88
VAT1-202ENST00000420567 WDR63Q8IWG1 891 aa20.54■□□□□ 0.88
VAT1-202ENST00000420567 XAGE3Q8WTP9 111 aa20.54■□□□□ 0.88
VAT1-202ENST00000420567 FANCIQ9NVI1 1328 aa20.53■□□□□ 0.88
VAT1-202ENST00000420567 ERVV-1B6SEH8 477 aa20.53■□□□□ 0.88
VAT1-202ENST00000420567 RGL2O15211 777 aa20.53■□□□□ 0.88
VAT1-202ENST00000420567 NPHP1O15259 732 aa20.53■□□□□ 0.88
VAT1-202ENST00000420567 CHRNA5P30532 468 aa20.53■□□□□ 0.88
VAT1-202ENST00000420567 COPS6Q7L5N1 327 aa20.53■□□□□ 0.88
VAT1-202ENST00000420567 TSPYL6Q8N831 410 aa20.53■□□□□ 0.88
VAT1-202ENST00000420567 FAM177BA6PVY3 158 aa20.52■□□□□ 0.88
VAT1-202ENST00000420567 CNBD1Q8NA66 436 aa20.52■□□□□ 0.88
VAT1-202ENST00000420567 SPINK5Q9NQ38 1064 aaPredicted RBP20.52■□□□□ 0.88
VAT1-202ENST00000420567 DBF4Q9UBU7 674 aaPredicted RBP20.52■□□□□ 0.88
VAT1-202ENST00000420567 AFDNP55196 1824 aaKnown RBP20.51■□□□□ 0.87
VAT1-202ENST00000420567 NBPF5PQ86XG9 351 aaPredicted RBP20.51■□□□□ 0.87
VAT1-202ENST00000420567 N4BP2Q86UW6 1770 aaPredicted RBP20.5■□□□□ 0.87
VAT1-202ENST00000420567 GPTP24298 496 aa20.5■□□□□ 0.87
VAT1-202ENST00000420567 ATP10DQ9P241 1426 aa20.5■□□□□ 0.87
VAT1-202ENST00000420567 KCNA3P22001 575 aa20.49■□□□□ 0.87
VAT1-202ENST00000420567 ST5P78524 1137 aa20.49■□□□□ 0.87
VAT1-202ENST00000420567 GIGYF2Q6Y7W6 1299 aaKnown RBP20.49■□□□□ 0.87
VAT1-202ENST00000420567 BCS1LQ9Y276 419 aa20.49■□□□□ 0.87
VAT1-202ENST00000420567 TWISTNBQ3B726 338 aaPredicted RBP20.48■□□□□ 0.87
VAT1-202ENST00000420567 C2CD5Q86YS7 1000 aa20.48■□□□□ 0.87
VAT1-202ENST00000420567 UBN2Q6ZU65 1347 aa20.48■□□□□ 0.87
VAT1-202ENST00000420567 ZNF521Q96K83 1311 aa20.48■□□□□ 0.87
VAT1-202ENST00000420567 TCERG1O14776 1098 aaKnown RBP20.47■□□□□ 0.87
VAT1-202ENST00000420567 GRIN3BO60391 1043 aa20.47■□□□□ 0.87
VAT1-202ENST00000420567 HYPKQ9NX55 129 aa20.47■□□□□ 0.87
VAT1-202ENST00000420567 EXOSC9Q06265 439 aaKnown RBP20.46■□□□□ 0.87
VAT1-202ENST00000420567 GOLGA2Q08379 1002 aa20.46■□□□□ 0.87
VAT1-202ENST00000420567 CCDC30Q5VVM6 783 aa20.46■□□□□ 0.87
VAT1-202ENST00000420567 ZNF34Q8IZ26 560 aa20.46■□□□□ 0.87
VAT1-202ENST00000420567 BRIP1Q9BX63 1249 aa20.46■□□□□ 0.87
VAT1-202ENST00000420567 MYH16Q9H6N6 1097 aa20.46■□□□□ 0.87
VAT1-202ENST00000420567 PHAXQ9H814 394 aaKnown RBP20.46■□□□□ 0.87
VAT1-202ENST00000420567 PIM2Q9P1W9 311 aa20.46■□□□□ 0.87
VAT1-202ENST00000420567 SUSD4Q5VX71 490 aa20.45■□□□□ 0.86
VAT1-202ENST00000420567 TPTE2Q6XPS3 522 aa20.45■□□□□ 0.86
VAT1-202ENST00000420567 H0YIN7 160 aa20.44■□□□□ 0.86
VAT1-202ENST00000420567 YY1P25490 414 aa20.44■□□□□ 0.86
VAT1-202ENST00000420567 GTF2E1P29083 439 aaPredicted RBP20.44■□□□□ 0.86
VAT1-202ENST00000420567 PDE6BP35913 854 aa20.44■□□□□ 0.86
VAT1-202ENST00000420567 DALRD3Q5D0E6 543 aaKnown RBP20.44■□□□□ 0.86
VAT1-202ENST00000420567 NUTM1Q86Y26 1132 aa20.44■□□□□ 0.86
VAT1-202ENST00000420567 PLBD2Q8NHP8 589 aa20.44■□□□□ 0.86
VAT1-202ENST00000420567 ABCC12Q96J65 1359 aa20.44■□□□□ 0.86
VAT1-202ENST00000420567 ANKRD31Q8N7Z5 1873 aa20.43■□□□□ 0.86
VAT1-202ENST00000420567 ERFEQ4G0M1 354 aa20.42■□□□□ 0.86
VAT1-202ENST00000420567 PARP10Q53GL7 1025 aa20.42■□□□□ 0.86
VAT1-202ENST00000420567 HSP90AB3PQ58FF7 597 aa20.42■□□□□ 0.86
VAT1-202ENST00000420567 ANKRD13DQ6ZTN6 518 aa20.42■□□□□ 0.86
VAT1-202ENST00000420567 ZNF428Q96B54 188 aa20.42■□□□□ 0.86
VAT1-202ENST00000420567 STK31Q9BXU1 1019 aa20.42■□□□□ 0.86
VAT1-202ENST00000420567 CHMP4AQ9BY43 222 aa20.42■□□□□ 0.86
VAT1-202ENST00000420567 NYXQ9GZU5 481 aa20.42■□□□□ 0.86
VAT1-202ENST00000420567 NUP98P52948 1817 aa20.41■□□□□ 0.86
VAT1-202ENST00000420567 NTSR2O95665 410 aa20.41■□□□□ 0.86
VAT1-202ENST00000420567 TCIRG1Q13488 830 aa20.41■□□□□ 0.86
VAT1-202ENST00000420567 ZNF622Q969S3 477 aaKnown RBP eCLIP20.41■□□□□ 0.86
VAT1-202ENST00000420567 IBTKQ9P2D0 1353 aaPredicted RBP20.41■□□□□ 0.86
VAT1-202ENST00000420567 COL11A2P13942 1736 aaPredicted RBP20.41■□□□□ 0.86
VAT1-202ENST00000420567 VAMP4O75379 141 aa20.4■□□□□ 0.86
VAT1-202ENST00000420567 RIC3Q7Z5B4 369 aa20.4■□□□□ 0.86
VAT1-202ENST00000420567 PPP1R42Q7Z4L9 355 aa20.39■□□□□ 0.85
VAT1-202ENST00000420567 NLRP10Q86W26 655 aa20.39■□□□□ 0.85
VAT1-202ENST00000420567 PDZRN3Q9UPQ7 1066 aa20.39■□□□□ 0.85
VAT1-202ENST00000420567 BRCA1P38398 1863 aaKnown RBP20.39■□□□□ 0.85
VAT1-202ENST00000420567 TNRC6CQ9HCJ0 1690 aaKnown RBP20.38■□□□□ 0.85
VAT1-202ENST00000420567 ATP5J2-PTCD1G3V325 749 aa20.38■□□□□ 0.85
VAT1-202ENST00000420567 SLC4A2P04920 1241 aa20.38■□□□□ 0.85
VAT1-202ENST00000420567 SRGNP10124 158 aa20.38■□□□□ 0.85
VAT1-202ENST00000420567 ARHGAP27Q6ZUM4 889 aa20.38■□□□□ 0.85
VAT1-202ENST00000420567 TTLL6Q8N841 843 aa20.38■□□□□ 0.85
VAT1-202ENST00000420567 UTP14AQ9BVJ6 771 aaKnown RBP20.38■□□□□ 0.85
VAT1-202ENST00000420567 DLEC1Q9Y238 1755 aa20.38■□□□□ 0.85
VAT1-202ENST00000420567 E9PSI1 815 aa20.37■□□□□ 0.85
VAT1-202ENST00000420567 G2E3Q7L622 706 aa20.37■□□□□ 0.85
VAT1-202ENST00000420567 CDCA7LQ96GN5 454 aa20.37■□□□□ 0.85
VAT1-202ENST00000420567 DDX58O95786 925 aaKnown RBP20.36■□□□□ 0.85
VAT1-202ENST00000420567 STYK1Q6J9G0 422 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms