RNA–Protein interactions for RNA: ENST00000420013.5

MCF2L-212, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-212ENST00000420013 NMRK2Q9NPI5 230 aa26.95■■□□□ 1.9
MCF2L-212ENST00000420013 PIP4K2AP48426 406 aaPredicted RBP26.93■■□□□ 1.9
MCF2L-212ENST00000420013 NUP98P52948 1817 aa26.93■■□□□ 1.9
MCF2L-212ENST00000420013 NBPF26B4DH59 902 aa26.92■■□□□ 1.9
MCF2L-212ENST00000420013 NBPF10Q6P3W6 841 aaKnown RBP26.92■■□□□ 1.9
MCF2L-212ENST00000420013 NBPF15Q8N660 670 aa26.92■■□□□ 1.9
MCF2L-212ENST00000420013 SLX4Q8IY92 1834 aa26.91■■□□□ 1.9
MCF2L-212ENST00000420013 STYK1Q6J9G0 422 aa26.91■■□□□ 1.9
MCF2L-212ENST00000420013 RBM46Q8TBY0 533 aaKnown RBP26.91■■□□□ 1.9
MCF2L-212ENST00000420013 ZNF622Q969S3 477 aaKnown RBP eCLIP26.91■■□□□ 1.9
MCF2L-212ENST00000420013 WDR90Q96KV7 1748 aa26.9■■□□□ 1.9
MCF2L-212ENST00000420013 NFKBIEO00221 500 aa26.9■■□□□ 1.9
MCF2L-212ENST00000420013 C16orf71Q8IYS4 520 aaPredicted RBP26.9■■□□□ 1.9
MCF2L-212ENST00000420013 CNKSR1Q969H4 720 aa26.9■■□□□ 1.9
MCF2L-212ENST00000420013 LTBP3Q9NS15 1303 aa26.9■■□□□ 1.9
MCF2L-212ENST00000420013 NBPF5PQ86XG9 351 aaPredicted RBP26.89■■□□□ 1.9
MCF2L-212ENST00000420013 MYBBP1AQ9BQG0 1328 aaKnown RBP26.89■■□□□ 1.89
MCF2L-212ENST00000420013 SRGNP10124 158 aa26.88■■□□□ 1.89
MCF2L-212ENST00000420013 EIF4A1P60842 406 aaKnown RBP26.88■■□□□ 1.89
MCF2L-212ENST00000420013 SOGA3Q5TF21 947 aa26.88■■□□□ 1.89
MCF2L-212ENST00000420013 ERBB4Q15303 1308 aa26.88■■□□□ 1.89
MCF2L-212ENST00000420013 APLP1P51693 650 aa26.87■■□□□ 1.89
MCF2L-212ENST00000420013 MASTLQ96GX5 879 aa26.87■■□□□ 1.89
MCF2L-212ENST00000420013 MIS18AQ9NYP9 233 aa26.87■■□□□ 1.89
MCF2L-212ENST00000420013 LMOD3Q0VAK6 560 aa26.86■■□□□ 1.89
MCF2L-212ENST00000420013 CCDC24Q8N4L8 307 aa26.86■■□□□ 1.89
MCF2L-212ENST00000420013 NIP7Q9Y221 180 aaKnown RBP eCLIP26.86■■□□□ 1.89
MCF2L-212ENST00000420013 FSTL1Q12841 308 aa26.85■■□□□ 1.89
MCF2L-212ENST00000420013 IBTKQ9P2D0 1353 aaPredicted RBP26.84■■□□□ 1.89
MCF2L-212ENST00000420013 RIC1Q4ADV7 1423 aa26.84■■□□□ 1.89
MCF2L-212ENST00000420013 PRELPP51888 382 aa26.84■■□□□ 1.89
MCF2L-212ENST00000420013 PRPF40BQ6NWY9 871 aaKnown RBP26.84■■□□□ 1.89
MCF2L-212ENST00000420013 TPTE2Q6XPS3 522 aa26.84■■□□□ 1.89
MCF2L-212ENST00000420013 THUMPD2Q9BTF0 503 aaKnown RBP26.84■■□□□ 1.89
MCF2L-212ENST00000420013 GLTPD2A6NH11 291 aa26.83■■□□□ 1.89
MCF2L-212ENST00000420013 ERVV-1B6SEH8 477 aa26.83■■□□□ 1.89
MCF2L-212ENST00000420013 C21orf2O43822 256 aa26.83■■□□□ 1.89
MCF2L-212ENST00000420013 BABAM1Q9NWV8 329 aa26.83■■□□□ 1.89
MCF2L-212ENST00000420013 KLRG2A4D1S0 409 aaPredicted RBP26.82■■□□□ 1.88
MCF2L-212ENST00000420013 TAOK3Q9H2K8 898 aa26.82■■□□□ 1.88
MCF2L-212ENST00000420013 MAP3K15Q6ZN16 1313 aa26.82■■□□□ 1.88
MCF2L-212ENST00000420013 NPR1P16066 1061 aa26.81■■□□□ 1.88
MCF2L-212ENST00000420013 KIF6Q6ZMV9 814 aa26.81■■□□□ 1.88
MCF2L-212ENST00000420013 TSPYL4Q9UJ04 414 aa26.81■■□□□ 1.88
MCF2L-212ENST00000420013 ANKRD36CQ5JPF3 1778 aa26.81■■□□□ 1.88
MCF2L-212ENST00000420013 NYXQ9GZU5 481 aa26.8■■□□□ 1.88
MCF2L-212ENST00000420013 RRAGCQ9HB90 399 aa26.8■■□□□ 1.88
MCF2L-212ENST00000420013 RIPK4P57078 832 aa26.79■■□□□ 1.88
MCF2L-212ENST00000420013 DDX10Q13206 875 aaKnown RBP26.79■■□□□ 1.88
MCF2L-212ENST00000420013 HLFQ16534 295 aa26.79■■□□□ 1.88
MCF2L-212ENST00000420013 TMPOP42166 694 aaKnown RBP26.78■■□□□ 1.88
MCF2L-212ENST00000420013 VEGFAP15692 232 aaPredicted RBP26.77■■□□□ 1.88
MCF2L-212ENST00000420013 CCDC93Q567U6 631 aa26.77■■□□□ 1.88
MCF2L-212ENST00000420013 ZNF219Q9P2Y4 722 aaPredicted RBP26.77■■□□□ 1.88
MCF2L-212ENST00000420013 ERFEQ4G0M1 354 aa26.76■■□□□ 1.87
MCF2L-212ENST00000420013 DPY19L2Q6NUT2 758 aa26.76■■□□□ 1.87
MCF2L-212ENST00000420013 SMC1BQ8NDV3 1235 aa26.76■■□□□ 1.87
MCF2L-212ENST00000420013 RRP7AQ9Y3A4 280 aaKnown RBP26.76■■□□□ 1.87
MCF2L-212ENST00000420013 ABCC12Q96J65 1359 aa26.75■■□□□ 1.87
MCF2L-212ENST00000420013 MYL6BP14649 208 aa26.74■■□□□ 1.87
MCF2L-212ENST00000420013 GTF2E1P29083 439 aaPredicted RBP26.74■■□□□ 1.87
MCF2L-212ENST00000420013 WDR43Q15061 677 aaKnown RBP eCLIP26.74■■□□□ 1.87
MCF2L-212ENST00000420013 C7orf43Q8WVR3 580 aa26.74■■□□□ 1.87
MCF2L-212ENST00000420013 TTLL7Q6ZT98 887 aa26.73■■□□□ 1.87
MCF2L-212ENST00000420013 NGEFQ8N5V2 710 aa26.73■■□□□ 1.87
MCF2L-212ENST00000420013 SCN4AP35499 1836 aa26.72■■□□□ 1.87
MCF2L-212ENST00000420013 ALDH1B1P30837 517 aa26.72■■□□□ 1.87
MCF2L-212ENST00000420013 CRY2Q49AN0 593 aa26.72■■□□□ 1.87
MCF2L-212ENST00000420013 GIGYF2Q6Y7W6 1299 aaKnown RBP26.72■■□□□ 1.87
MCF2L-212ENST00000420013 FAM177BA6PVY3 158 aa26.71■■□□□ 1.87
MCF2L-212ENST00000420013 RUNDC1Q96C34 613 aa26.71■■□□□ 1.87
MCF2L-212ENST00000420013 ZBTB3Q9H5J0 574 aa26.71■■□□□ 1.87
MCF2L-212ENST00000420013 UBN2Q6ZU65 1347 aa26.7■■□□□ 1.87
MCF2L-212ENST00000420013 FKBP4Q02790 459 aaKnown RBP eCLIP26.7■■□□□ 1.862e-6■□□□□ 10.6
MCF2L-212ENST00000420013 PARP10Q53GL7 1025 aa26.69■■□□□ 1.86
MCF2L-212ENST00000420013 LRP10Q7Z4F1 713 aa26.69■■□□□ 1.86
MCF2L-212ENST00000420013 SNED1Q8TER0 1413 aa26.69■■□□□ 1.86
MCF2L-212ENST00000420013 RTKN2Q8IZC4 609 aa26.68■■□□□ 1.86
MCF2L-212ENST00000420013 RNF123Q5XPI4 1314 aa26.67■■□□□ 1.86
MCF2L-212ENST00000420013 ZNF34Q8IZ26 560 aa26.67■■□□□ 1.86
MCF2L-212ENST00000420013 NTSR2O95665 410 aa26.66■■□□□ 1.86
MCF2L-212ENST00000420013 GPTP24298 496 aa26.66■■□□□ 1.86
MCF2L-212ENST00000420013 PDIA6Q15084 440 aa26.66■■□□□ 1.86
MCF2L-212ENST00000420013 PPP1R42Q7Z4L9 355 aa26.66■■□□□ 1.86
MCF2L-212ENST00000420013 NUTM1Q86Y26 1132 aa26.66■■□□□ 1.86
MCF2L-212ENST00000420013 CCDC146Q8IYE0 955 aa26.66■■□□□ 1.86
MCF2L-212ENST00000420013 PRKRIP1Q9H875 184 aaPredicted RBP26.66■■□□□ 1.86
MCF2L-212ENST00000420013 LAMB2P55268 1798 aa26.66■■□□□ 1.86
MCF2L-212ENST00000420013 CC2D2BQ6DHV5 1058 aa26.65■■□□□ 1.86
MCF2L-212ENST00000420013 DNAJC5GQ8N7S2 189 aa26.65■■□□□ 1.86
MCF2L-212ENST00000420013 POTECB2RU33 542 aa26.64■■□□□ 1.86
MCF2L-212ENST00000420013 EIF2S2P20042 333 aaKnown RBP26.64■■□□□ 1.86
MCF2L-212ENST00000420013 RPGRQ92834 1020 aaKnown RBP26.64■■□□□ 1.86
MCF2L-212ENST00000420013 CHL1O00533 1208 aa26.63■■□□□ 1.85
MCF2L-212ENST00000420013 HOXB7P09629 217 aa26.63■■□□□ 1.85
MCF2L-212ENST00000420013 HOXA10P31260 410 aaPredicted RBP26.63■■□□□ 1.85
MCF2L-212ENST00000420013 HSP90AB3PQ58FF7 597 aa26.63■■□□□ 1.85
MCF2L-212ENST00000420013 SUSD4Q5VX71 490 aa26.63■■□□□ 1.85
MCF2L-212ENST00000420013 GRIPAP1Q4V328 841 aa26.62■■□□□ 1.85
MCF2L-212ENST00000420013 L3MBTL3Q96JM7 780 aaPredicted RBP26.62■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms