RNA–Protein interactions for RNA: ENST00000419500.1

HMGN1P4-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 4, humanhuman

BASIC

Gene HMGN1P4, Length 290 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P4-201ENST00000419500 CHL1O00533 1208 aa16.59■□□□□ 0.25
HMGN1P4-201ENST00000419500 RGL2O15211 777 aa16.59■□□□□ 0.25
HMGN1P4-201ENST00000419500 EIF2S2P20042 333 aaKnown RBP16.59■□□□□ 0.25
HMGN1P4-201ENST00000419500 KCNA3P22001 575 aa16.59■□□□□ 0.25
HMGN1P4-201ENST00000419500 ST5P78524 1137 aa16.59■□□□□ 0.25
HMGN1P4-201ENST00000419500 DALRD3Q5D0E6 543 aaKnown RBP16.59■□□□□ 0.25
HMGN1P4-201ENST00000419500 ZNF784Q8NCA9 323 aaPredicted RBP16.59■□□□□ 0.25
HMGN1P4-201ENST00000419500 RNF216Q9NWF9 866 aaPredicted RBP16.59■□□□□ 0.25
HMGN1P4-201ENST00000419500 DLEC1Q9Y238 1755 aa16.59■□□□□ 0.25
HMGN1P4-201ENST00000419500 PRR5LQ6MZQ0 368 aa16.58■□□□□ 0.24
HMGN1P4-201ENST00000419500 CFAP44Q96MT7 982 aa16.58■□□□□ 0.24
HMGN1P4-201ENST00000419500 NIP7Q9Y221 180 aaKnown RBP eCLIP16.58■□□□□ 0.24
HMGN1P4-201ENST00000419500 ARFGEF1Q9Y6D6 1849 aa16.58■□□□□ 0.24
HMGN1P4-201ENST00000419500 MAP3K15Q6ZN16 1313 aa16.57■□□□□ 0.24
HMGN1P4-201ENST00000419500 H0YIN7 160 aa16.57■□□□□ 0.24
HMGN1P4-201ENST00000419500 PDE6BP35913 854 aa16.57■□□□□ 0.24
HMGN1P4-201ENST00000419500 NBPF5PQ86XG9 351 aaPredicted RBP16.57■□□□□ 0.24
HMGN1P4-201ENST00000419500 C2CD5Q86YS7 1000 aa16.57■□□□□ 0.24
HMGN1P4-201ENST00000419500 ERVV-1B6SEH8 477 aa16.56■□□□□ 0.24
HMGN1P4-201ENST00000419500 HLFQ16534 295 aa16.56■□□□□ 0.24
HMGN1P4-201ENST00000419500 ARHGAP27Q6ZUM4 889 aa16.56■□□□□ 0.24
HMGN1P4-201ENST00000419500 CCDC24Q8N4L8 307 aa16.56■□□□□ 0.24
HMGN1P4-201ENST00000419500 NECTIN2Q92692 538 aa16.56■□□□□ 0.24
HMGN1P4-201ENST00000419500 BRIP1Q9BX63 1249 aa16.56■□□□□ 0.24
HMGN1P4-201ENST00000419500 PDZRN3Q9UPQ7 1066 aa16.56■□□□□ 0.24
HMGN1P4-201ENST00000419500 ANKRD31Q8N7Z5 1873 aa16.56■□□□□ 0.24
HMGN1P4-201ENST00000419500 GNAI1P63096 354 aa16.55■□□□□ 0.24
HMGN1P4-201ENST00000419500 KRT24Q2M2I5 525 aa16.55■□□□□ 0.24
HMGN1P4-201ENST00000419500 TTLL7Q6ZT98 887 aa16.55■□□□□ 0.24
HMGN1P4-201ENST00000419500 ZBTB3Q9H5J0 574 aa16.55■□□□□ 0.24
HMGN1P4-201ENST00000419500 MBIPQ9NS73 344 aa16.55■□□□□ 0.24
HMGN1P4-201ENST00000419500 IFT57Q9NWB7 429 aa16.55■□□□□ 0.24
HMGN1P4-201ENST00000419500 ATP10DQ9P241 1426 aa16.54■□□□□ 0.24
HMGN1P4-201ENST00000419500 COL11A2P13942 1736 aaPredicted RBP16.54■□□□□ 0.24
HMGN1P4-201ENST00000419500 FAM177BA6PVY3 158 aa16.54■□□□□ 0.24
HMGN1P4-201ENST00000419500 HOXB7P09629 217 aa16.54■□□□□ 0.24
HMGN1P4-201ENST00000419500 HDGFL1Q5TGJ6 251 aa16.54■□□□□ 0.24
HMGN1P4-201ENST00000419500 GTF2E1P29083 439 aaPredicted RBP16.53■□□□□ 0.24
HMGN1P4-201ENST00000419500 TPTE2Q6XPS3 522 aa16.53■□□□□ 0.24
HMGN1P4-201ENST00000419500 TTLL6Q8N841 843 aa16.53■□□□□ 0.24
HMGN1P4-201ENST00000419500 NUP98P52948 1817 aa16.53■□□□□ 0.24
HMGN1P4-201ENST00000419500 ADCY9O60503 1353 aa16.52■□□□□ 0.24
HMGN1P4-201ENST00000419500 ANXA1P04083 346 aa16.52■□□□□ 0.24
HMGN1P4-201ENST00000419500 PDIA6Q15084 440 aa16.52■□□□□ 0.24
HMGN1P4-201ENST00000419500 PROSER3Q2NL68 480 aa16.52■□□□□ 0.24
HMGN1P4-201ENST00000419500 ZNF622Q969S3 477 aaKnown RBP eCLIP16.52■□□□□ 0.24
HMGN1P4-201ENST00000419500 NYXQ9GZU5 481 aa16.52■□□□□ 0.24
HMGN1P4-201ENST00000419500 SENP3-EIF4A1A0A087X0R7 540 aa16.51■□□□□ 0.23
HMGN1P4-201ENST00000419500 ZNF853P0CG23 659 aa16.51■□□□□ 0.23
HMGN1P4-201ENST00000419500 GPTP24298 496 aa16.51■□□□□ 0.23
HMGN1P4-201ENST00000419500 DDX21Q9NR30 783 aaKnown RBP eCLIP16.51■□□□□ 0.23
HMGN1P4-201ENST00000419500 CHPF2Q9P2E5 772 aa16.51■□□□□ 0.23
HMGN1P4-201ENST00000419500 HOXD11P31277 338 aaPredicted RBP16.5■□□□□ 0.23
HMGN1P4-201ENST00000419500 AIMP1Q12904 312 aaKnown RBP16.5■□□□□ 0.23
HMGN1P4-201ENST00000419500 CCDC27Q2M243 656 aa16.5■□□□□ 0.23
HMGN1P4-201ENST00000419500 DUSP27Q5VZP5 1158 aa16.5■□□□□ 0.23
HMGN1P4-201ENST00000419500 GIGYF2Q6Y7W6 1299 aaKnown RBP16.5■□□□□ 0.23
HMGN1P4-201ENST00000419500 LRP10Q7Z4F1 713 aa16.5■□□□□ 0.23
HMGN1P4-201ENST00000419500 COPS6Q7L5N1 327 aa16.49■□□□□ 0.23
HMGN1P4-201ENST00000419500 XAGE3Q8WTP9 111 aa16.49■□□□□ 0.23
HMGN1P4-201ENST00000419500 DBF4Q9UBU7 674 aaPredicted RBP16.49■□□□□ 0.23
HMGN1P4-201ENST00000419500 IBTKQ9P2D0 1353 aaPredicted RBP16.49■□□□□ 0.23
HMGN1P4-201ENST00000419500 UBN2Q6ZU65 1347 aa16.48■□□□□ 0.23
HMGN1P4-201ENST00000419500 SRGNP10124 158 aa16.48■□□□□ 0.23
HMGN1P4-201ENST00000419500 STYK1Q6J9G0 422 aa16.48■□□□□ 0.23
HMGN1P4-201ENST00000419500 WWC1Q8IX03 1113 aa16.48■□□□□ 0.23
HMGN1P4-201ENST00000419500 FAM9BQ8IZU0 186 aa16.48■□□□□ 0.23
HMGN1P4-201ENST00000419500 ZNF526Q8TF50 670 aaPredicted RBP16.48■□□□□ 0.23
HMGN1P4-201ENST00000419500 CNKSR1Q969H4 720 aa16.48■□□□□ 0.23
HMGN1P4-201ENST00000419500 MASTLQ96GX5 879 aa16.48■□□□□ 0.23
HMGN1P4-201ENST00000419500 CACNA1SQ13698 1873 aa16.48■□□□□ 0.23
HMGN1P4-201ENST00000419500 ANKRD36CQ5JPF3 1778 aa16.47■□□□□ 0.23
HMGN1P4-201ENST00000419500 PARP10Q53GL7 1025 aa16.47■□□□□ 0.23
HMGN1P4-201ENST00000419500 HSP90AB3PQ58FF7 597 aa16.47■□□□□ 0.23
HMGN1P4-201ENST00000419500 PPP1R42Q7Z4L9 355 aa16.47■□□□□ 0.23
HMGN1P4-201ENST00000419500 GPBP1L1Q9HC44 474 aaPredicted RBP16.47■□□□□ 0.23
HMGN1P4-201ENST00000419500 HYPKQ9NX55 129 aa16.47■□□□□ 0.23
HMGN1P4-201ENST00000419500 TNRC6CQ9HCJ0 1690 aaKnown RBP16.46■□□□□ 0.23
HMGN1P4-201ENST00000419500 ARFGEF2Q9Y6D5 1785 aa16.46■□□□□ 0.23
HMGN1P4-201ENST00000419500 ELL2O00472 640 aaPredicted RBP16.46■□□□□ 0.23
HMGN1P4-201ENST00000419500 NPR1P16066 1061 aa16.46■□□□□ 0.23
HMGN1P4-201ENST00000419500 C9orf131Q5VYM1 1079 aa16.46■□□□□ 0.23
HMGN1P4-201ENST00000419500 PRPF40BQ6NWY9 871 aaKnown RBP16.46■□□□□ 0.23
HMGN1P4-201ENST00000419500 NUTM1Q86Y26 1132 aa16.46■□□□□ 0.23
HMGN1P4-201ENST00000419500 ZNF34Q8IZ26 560 aa16.46■□□□□ 0.23
HMGN1P4-201ENST00000419500 TSR2Q969E8 191 aaKnown RBP16.46■□□□□ 0.23
HMGN1P4-201ENST00000419500 CHMP4AQ9BY43 222 aa16.46■□□□□ 0.23
HMGN1P4-201ENST00000419500 RNF181Q9P0P0 153 aa16.46■□□□□ 0.23
HMGN1P4-201ENST00000419500 ZNF219Q9P2Y4 722 aaPredicted RBP16.46■□□□□ 0.23
HMGN1P4-201ENST00000419500 ABCC12Q96J65 1359 aa16.46■□□□□ 0.23
HMGN1P4-201ENST00000419500 RIC1Q4ADV7 1423 aa16.45■□□□□ 0.22
HMGN1P4-201ENST00000419500 RASSF7Q02833 373 aa16.45■□□□□ 0.22
HMGN1P4-201ENST00000419500 SUSD4Q5VX71 490 aa16.45■□□□□ 0.22
HMGN1P4-201ENST00000419500 SALL2Q9Y467 1007 aaPredicted RBP16.45■□□□□ 0.22
HMGN1P4-201ENST00000419500 IL16Q14005 1332 aa16.45■□□□□ 0.22
HMGN1P4-201ENST00000419500 KLRG2A4D1S0 409 aaPredicted RBP16.44■□□□□ 0.22
HMGN1P4-201ENST00000419500 C21orf2O43822 256 aa16.44■□□□□ 0.22
HMGN1P4-201ENST00000419500 NTSR2O95665 410 aa16.44■□□□□ 0.22
HMGN1P4-201ENST00000419500 ERFEQ4G0M1 354 aa16.44■□□□□ 0.22
HMGN1P4-201ENST00000419500 SOGA3Q5TF21 947 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms