RNA–Protein interactions for RNA: ENST00000419277.5

HLA-DPA1-242, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS P2 BASIC

Gene HLA-DPA1, Length 1,704 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-242ENST00000419277 ESYT1Q9BSJ8 1104 aa17.77■□□□□ 0.44
HLA-DPA1-242ENST00000419277 METTL22Q9BUU2 404 aaPredicted RBP17.77■□□□□ 0.44
HLA-DPA1-242ENST00000419277 ZNF335Q9H4Z2 1342 aaPredicted RBP17.77■□□□□ 0.43
HLA-DPA1-242ENST00000419277 PLEKHG5O94827 1062 aa17.76■□□□□ 0.43
HLA-DPA1-242ENST00000419277 PROSER3Q2NL68 480 aa17.76■□□□□ 0.43
HLA-DPA1-242ENST00000419277 NUP188Q5SRE5 1749 aa17.76■□□□□ 0.43
HLA-DPA1-242ENST00000419277 KCPQ6ZWJ8 1503 aa17.75■□□□□ 0.43
HLA-DPA1-242ENST00000419277 CHMLP26374 656 aa17.75■□□□□ 0.43
HLA-DPA1-242ENST00000419277 GBP4Q96PP9 640 aa17.75■□□□□ 0.43
HLA-DPA1-242ENST00000419277 CWC22Q9HCG8 908 aaKnown RBP17.75■□□□□ 0.43
HLA-DPA1-242ENST00000419277 ANXA1P04083 346 aa17.74■□□□□ 0.43
HLA-DPA1-242ENST00000419277 OS9Q13438 667 aaPredicted RBP17.74■□□□□ 0.43
HLA-DPA1-242ENST00000419277 ANKRD13DQ6ZTN6 518 aa17.74■□□□□ 0.43
HLA-DPA1-242ENST00000419277 NEURL1BA8MQ27 555 aa17.73■□□□□ 0.43
HLA-DPA1-242ENST00000419277 TRIM6-TRIM34B2RNG4 842 aa17.73■□□□□ 0.43
HLA-DPA1-242ENST00000419277 LRP10Q7Z4F1 713 aa17.73■□□□□ 0.43
HLA-DPA1-242ENST00000419277 PI4K2BQ8TCG2 481 aa17.73■□□□□ 0.43
HLA-DPA1-242ENST00000419277 HIP1O00291 1037 aa17.72■□□□□ 0.43
HLA-DPA1-242ENST00000419277 SLC39A6Q13433 755 aa17.72■□□□□ 0.43
HLA-DPA1-242ENST00000419277 GCKRQ14397 625 aa17.72■□□□□ 0.43
HLA-DPA1-242ENST00000419277 PLBD2Q8NHP8 589 aa17.72■□□□□ 0.43
HLA-DPA1-242ENST00000419277 WNK3Q9BYP7 1800 aa17.72■□□□□ 0.43
HLA-DPA1-242ENST00000419277 MCM4P33991 863 aa17.72■□□□□ 0.43
HLA-DPA1-242ENST00000419277 XAGE3Q8WTP9 111 aa17.72■□□□□ 0.43
HLA-DPA1-242ENST00000419277 RUFY2Q8WXA3 655 aa17.72■□□□□ 0.43
HLA-DPA1-242ENST00000419277 NUCB2P80303 420 aa17.71■□□□□ 0.43
HLA-DPA1-242ENST00000419277 RAB3GAP1Q15042 981 aa17.71■□□□□ 0.43
HLA-DPA1-242ENST00000419277 CWF19L2Q2TBE0 894 aaKnown RBP17.71■□□□□ 0.43
HLA-DPA1-242ENST00000419277 CLEC17AQ6ZS10 378 aa17.71■□□□□ 0.43
HLA-DPA1-242ENST00000419277 COPS6Q7L5N1 327 aa17.71■□□□□ 0.43
HLA-DPA1-242ENST00000419277 TICAM2Q86XR7 235 aa17.71■□□□□ 0.43
HLA-DPA1-242ENST00000419277 ECHDC1Q9NTX5 307 aa17.71■□□□□ 0.43
HLA-DPA1-242ENST00000419277 PRAMEF22A3QJZ6 481 aa17.7■□□□□ 0.42
HLA-DPA1-242ENST00000419277 IGKV5-2P06315 115 aa17.7■□□□□ 0.42
HLA-DPA1-242ENST00000419277 G3BP1Q13283 466 aaKnown RBP eCLIP17.7■□□□□ 0.42
HLA-DPA1-242ENST00000419277 RILPL2Q969X0 211 aa17.7■□□□□ 0.42
HLA-DPA1-242ENST00000419277 TEX13AQ9BXU3 409 aaPredicted RBP17.7■□□□□ 0.42
HLA-DPA1-242ENST00000419277 IL1RAPL2Q9NP60 686 aa17.7■□□□□ 0.42
HLA-DPA1-242ENST00000419277 TOGARAM1Q9Y4F4 1720 aa17.7■□□□□ 0.42
HLA-DPA1-242ENST00000419277 RFX7Q2KHR2 1363 aa17.69■□□□□ 0.42
HLA-DPA1-242ENST00000419277 RAD50Q92878 1312 aa17.69■□□□□ 0.42
HLA-DPA1-242ENST00000419277 IFIT2P09913 472 aaKnown RBP17.69■□□□□ 0.42
HLA-DPA1-242ENST00000419277 RABL6Q3YEC7 729 aaPredicted RBP17.69■□□□□ 0.42
HLA-DPA1-242ENST00000419277 VSIG10Q8N0Z9 540 aa17.69■□□□□ 0.42
HLA-DPA1-242ENST00000419277 SUCLG2Q96I99 432 aa17.69■□□□□ 0.42
HLA-DPA1-242ENST00000419277 BICC1Q9H694 974 aaKnown RBP17.69■□□□□ 0.42
HLA-DPA1-242ENST00000419277 ISY1Q9ULR0 285 aaKnown RBP17.69■□□□□ 0.42
HLA-DPA1-242ENST00000419277 AIMP1Q12904 312 aaKnown RBP17.68■□□□□ 0.42
HLA-DPA1-242ENST00000419277 COPRSQ9NQ92 184 aa17.68■□□□□ 0.42
HLA-DPA1-242ENST00000419277 ROBO1Q9Y6N7 1651 aa17.68■□□□□ 0.42
HLA-DPA1-242ENST00000419277 GOLGA6L22H0YM25 854 aa17.67■□□□□ 0.42
HLA-DPA1-242ENST00000419277 EVA1CP58658 441 aa17.67■□□□□ 0.42
HLA-DPA1-242ENST00000419277 SKOR2Q2VWA4 1001 aaPredicted RBP17.67■□□□□ 0.42
HLA-DPA1-242ENST00000419277 EVI5LQ96CN4 794 aa17.67■□□□□ 0.42
HLA-DPA1-242ENST00000419277 ANO2Q9NQ90 1003 aa17.67■□□□□ 0.42
HLA-DPA1-242ENST00000419277 SGSM2O43147 1006 aa17.67■□□□□ 0.42
HLA-DPA1-242ENST00000419277 MYL6BP14649 208 aa17.67■□□□□ 0.42
HLA-DPA1-242ENST00000419277 USP16Q9Y5T5 823 aa17.67■□□□□ 0.42
HLA-DPA1-242ENST00000419277 DISP2A7MBM2 1401 aa17.66■□□□□ 0.42
HLA-DPA1-242ENST00000419277 TJP1Q07157 1748 aa17.66■□□□□ 0.42
HLA-DPA1-242ENST00000419277 NUTM1Q86Y26 1132 aa17.66■□□□□ 0.42
HLA-DPA1-242ENST00000419277 KAZALD1Q96I82 304 aa17.66■□□□□ 0.42
HLA-DPA1-242ENST00000419277 MYD88Q99836 296 aa17.66■□□□□ 0.42
HLA-DPA1-242ENST00000419277 CD2BP2O95400 341 aaKnown RBP17.65■□□□□ 0.42
HLA-DPA1-242ENST00000419277 KIAA1211Q6ZU35 1233 aa17.65■□□□□ 0.42
HLA-DPA1-242ENST00000419277 INTS4Q96HW7 963 aaKnown RBP17.65■□□□□ 0.42
HLA-DPA1-242ENST00000419277 BCL11AQ9H165 835 aa17.65■□□□□ 0.42
HLA-DPA1-242ENST00000419277 ITGB4P16144 1822 aa17.64■□□□□ 0.42
HLA-DPA1-242ENST00000419277 HSPA4P34932 840 aa17.64■□□□□ 0.41
HLA-DPA1-242ENST00000419277 TSHZ3Q63HK5 1081 aa17.64■□□□□ 0.41
HLA-DPA1-242ENST00000419277 CCDC191Q8NCU4 936 aa17.64■□□□□ 0.41
HLA-DPA1-242ENST00000419277 RBM42Q9BTD8 480 aaKnown RBP17.64■□□□□ 0.41
HLA-DPA1-242ENST00000419277 DIAPH3Q9NSV4 1193 aa17.64■□□□□ 0.41
HLA-DPA1-242ENST00000419277 SPEF2Q9C093 1822 aa17.63■□□□□ 0.41
HLA-DPA1-242ENST00000419277 SPRYD3Q8NCJ5 442 aa17.63■□□□□ 0.41
HLA-DPA1-242ENST00000419277 CDCA7Q9BWT1 371 aaPredicted RBP17.63■□□□□ 0.41
HLA-DPA1-242ENST00000419277 ATG3Q9NT62 314 aa17.63■□□□□ 0.41
HLA-DPA1-242ENST00000419277 TMOD3Q9NYL9 352 aa17.63■□□□□ 0.41
HLA-DPA1-242ENST00000419277 COL16A1Q07092 1604 aaPredicted RBP17.62■□□□□ 0.41
HLA-DPA1-242ENST00000419277 L1TD1Q5T7N2 865 aaKnown RBP17.62■□□□□ 0.41
HLA-DPA1-242ENST00000419277 AACSQ86V21 672 aa17.62■□□□□ 0.41
HLA-DPA1-242ENST00000419277 TNPO1Q92973 898 aaKnown RBP17.62■□□□□ 0.41
HLA-DPA1-242ENST00000419277 SNRKQ9NRH2 765 aa17.62■□□□□ 0.41
HLA-DPA1-242ENST00000419277 CICQ96RK0 1608 aaPredicted RBP17.62■□□□□ 0.41
HLA-DPA1-242ENST00000419277 UNC5CLQ8IV45 518 aa17.61■□□□□ 0.41
HLA-DPA1-242ENST00000419277 CWC25Q9NXE8 425 aaPredicted RBP17.61■□□□□ 0.41
HLA-DPA1-242ENST00000419277 FBXO3Q9UK99 471 aa17.61■□□□□ 0.41
HLA-DPA1-242ENST00000419277 ANKRD36CQ5JPF3 1778 aa17.6■□□□□ 0.41
HLA-DPA1-242ENST00000419277 SASH1O94885 1247 aa17.6■□□□□ 0.41
HLA-DPA1-242ENST00000419277 NEK4P51957 841 aa17.6■□□□□ 0.41
HLA-DPA1-242ENST00000419277 CUL4AQ13619 759 aa17.6■□□□□ 0.41
HLA-DPA1-242ENST00000419277 GPR108Q9NPR9 543 aa17.6■□□□□ 0.41
HLA-DPA1-242ENST00000419277 NWD2Q9ULI1 1742 aa17.6■□□□□ 0.41
HLA-DPA1-242ENST00000419277 A0A087WZG4 1122 aa17.59■□□□□ 0.41
HLA-DPA1-242ENST00000419277 H7C1W4 665 aa17.59■□□□□ 0.41
HLA-DPA1-242ENST00000419277 CASP7P55210 303 aa17.59■□□□□ 0.41
HLA-DPA1-242ENST00000419277 TRIM28Q13263 835 aaKnown RBP17.59■□□□□ 0.41
HLA-DPA1-242ENST00000419277 STRN4Q9NRL3 753 aa17.59■□□□□ 0.41
HLA-DPA1-242ENST00000419277 CYP2E1P05181 493 aaPredicted RBP17.58■□□□□ 0.41
HLA-DPA1-242ENST00000419277 UBE3BQ7Z3V4 1068 aa17.58■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms