RNA–Protein interactions for RNA: ENST00000418336.6

PKNOX1-202, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-202ENST00000418336 IFT57Q9NWB7 429 aa26.96■■□□□ 1.91
PKNOX1-202ENST00000418336 LAS1LQ9Y4W2 734 aaKnown RBP26.95■■□□□ 1.9
PKNOX1-202ENST00000418336 MAP3K15Q6ZN16 1313 aa26.94■■□□□ 1.9
PKNOX1-202ENST00000418336 ERVV-1B6SEH8 477 aa26.94■■□□□ 1.9
PKNOX1-202ENST00000418336 MYL6BP14649 208 aa26.94■■□□□ 1.9
PKNOX1-202ENST00000418336 NCBP3Q53F19 620 aaKnown RBP26.94■■□□□ 1.9
PKNOX1-202ENST00000418336 ATP10DQ9P241 1426 aa26.93■■□□□ 1.9
PKNOX1-202ENST00000418336 SENP3-EIF4A1A0A087X0R7 540 aa26.93■■□□□ 1.9
PKNOX1-202ENST00000418336 EIF2S2P20042 333 aaKnown RBP26.93■■□□□ 1.9
PKNOX1-202ENST00000418336 SETDB2Q96T68 719 aa26.93■■□□□ 1.9
PKNOX1-202ENST00000418336 ANXA1P04083 346 aa26.92■■□□□ 1.9
PKNOX1-202ENST00000418336 NPM2Q86SE8 214 aaKnown RBP26.92■■□□□ 1.9
PKNOX1-202ENST00000418336 CCDC24Q8N4L8 307 aa26.92■■□□□ 1.9
PKNOX1-202ENST00000418336 NGEFQ8N5V2 710 aa26.92■■□□□ 1.9
PKNOX1-202ENST00000418336 PIM2Q9P1W9 311 aa26.92■■□□□ 1.9
PKNOX1-202ENST00000418336 BCS1LQ9Y276 419 aa26.92■■□□□ 1.9
PKNOX1-202ENST00000418336 ADCY9O60503 1353 aa26.92■■□□□ 1.9
PKNOX1-202ENST00000418336 HOXB7P09629 217 aa26.91■■□□□ 1.9
PKNOX1-202ENST00000418336 WWC1Q8IX03 1113 aa26.91■■□□□ 1.9
PKNOX1-202ENST00000418336 ZNF784Q8NCA9 323 aaPredicted RBP26.9■■□□□ 1.9
PKNOX1-202ENST00000418336 BRIP1Q9BX63 1249 aa26.9■■□□□ 1.9
PKNOX1-202ENST00000418336 ZNF652Q9Y2D9 606 aa26.9■■□□□ 1.9
PKNOX1-202ENST00000418336 UBN2Q6ZU65 1347 aa26.89■■□□□ 1.89
PKNOX1-202ENST00000418336 GNAI1P63096 354 aa26.88■■□□□ 1.89
PKNOX1-202ENST00000418336 NECTIN2Q92692 538 aa26.88■■□□□ 1.89
PKNOX1-202ENST00000418336 NIP7Q9Y221 180 aaKnown RBP eCLIP26.88■■□□□ 1.89
PKNOX1-202ENST00000418336 DUSP27Q5VZP5 1158 aa26.87■■□□□ 1.89
PKNOX1-202ENST00000418336 CNBD1Q8NA66 436 aa26.87■■□□□ 1.89
PKNOX1-202ENST00000418336 ZBTB3Q9H5J0 574 aa26.87■■□□□ 1.89
PKNOX1-202ENST00000418336 DDX21Q9NR30 783 aaKnown RBP eCLIP26.87■■□□□ 1.89
PKNOX1-202ENST00000418336 CALD1Q05682 793 aaKnown RBP26.86■■□□□ 1.89
PKNOX1-202ENST00000418336 DALRD3Q5D0E6 543 aaKnown RBP26.86■■□□□ 1.89
PKNOX1-202ENST00000418336 GIGYF2Q6Y7W6 1299 aaKnown RBP26.86■■□□□ 1.89
PKNOX1-202ENST00000418336 C2CD5Q86YS7 1000 aa26.86■■□□□ 1.89
PKNOX1-202ENST00000418336 ZNF34Q8IZ26 560 aa26.86■■□□□ 1.89
PKNOX1-202ENST00000418336 TNRC6CQ9HCJ0 1690 aaKnown RBP26.85■■□□□ 1.89
PKNOX1-202ENST00000418336 KLRG2A4D1S0 409 aaPredicted RBP26.85■■□□□ 1.89
PKNOX1-202ENST00000418336 C8orf58Q8NAV2 365 aa26.85■■□□□ 1.89
PKNOX1-202ENST00000418336 CHPF2Q9P2E5 772 aa26.85■■□□□ 1.89
PKNOX1-202ENST00000418336 KIF6Q6ZMV9 814 aa26.84■■□□□ 1.89
PKNOX1-202ENST00000418336 IBTKQ9P2D0 1353 aaPredicted RBP26.84■■□□□ 1.89
PKNOX1-202ENST00000418336 HDGFL1Q5TGJ6 251 aa26.83■■□□□ 1.89
PKNOX1-202ENST00000418336 COPS6Q7L5N1 327 aa26.83■■□□□ 1.89
PKNOX1-202ENST00000418336 NBPF5PQ86XG9 351 aaPredicted RBP26.83■■□□□ 1.89
PKNOX1-202ENST00000418336 XAGE3Q8WTP9 111 aa26.83■■□□□ 1.89
PKNOX1-202ENST00000418336 ABCC12Q96J65 1359 aa26.83■■□□□ 1.88
PKNOX1-202ENST00000418336 ANKRD36CQ5JPF3 1778 aa26.82■■□□□ 1.88
PKNOX1-202ENST00000418336 ARFGEF2Q9Y6D5 1785 aa26.82■■□□□ 1.88
PKNOX1-202ENST00000418336 PDE6BP35913 854 aa26.82■■□□□ 1.88
PKNOX1-202ENST00000418336 IL16Q14005 1332 aa26.82■■□□□ 1.88
PKNOX1-202ENST00000418336 H0YIN7 160 aa26.81■■□□□ 1.88
PKNOX1-202ENST00000418336 SRGNP10124 158 aa26.81■■□□□ 1.88
PKNOX1-202ENST00000418336 TSPYL6Q8N831 410 aa26.81■■□□□ 1.88
PKNOX1-202ENST00000418336 TSR2Q969E8 191 aaKnown RBP26.81■■□□□ 1.88
PKNOX1-202ENST00000418336 ST5P78524 1137 aa26.8■■□□□ 1.88
PKNOX1-202ENST00000418336 SUSD4Q5VX71 490 aa26.8■■□□□ 1.88
PKNOX1-202ENST00000418336 TPTE2Q6XPS3 522 aa26.8■■□□□ 1.88
PKNOX1-202ENST00000418336 RIC1Q4ADV7 1423 aa26.8■■□□□ 1.88
PKNOX1-202ENST00000418336 NTSR2O95665 410 aa26.79■■□□□ 1.88
PKNOX1-202ENST00000418336 FAM9BQ8IZU0 186 aa26.79■■□□□ 1.88
PKNOX1-202ENST00000418336 PDZRN3Q9UPQ7 1066 aa26.79■■□□□ 1.88
PKNOX1-202ENST00000418336 SLX4Q8IY92 1834 aa26.79■■□□□ 1.88
PKNOX1-202ENST00000418336 SBF1O95248 1867 aa26.79■■□□□ 1.88
PKNOX1-202ENST00000418336 GPTP24298 496 aa26.78■■□□□ 1.88
PKNOX1-202ENST00000418336 TTLL6Q8N841 843 aa26.78■■□□□ 1.88
PKNOX1-202ENST00000418336 DBF4Q9UBU7 674 aaPredicted RBP26.78■■□□□ 1.88
PKNOX1-202ENST00000418336 ELL2O00472 640 aaPredicted RBP26.77■■□□□ 1.88
PKNOX1-202ENST00000418336 PRELPP51888 382 aa26.77■■□□□ 1.88
PKNOX1-202ENST00000418336 ARHGAP27Q6ZUM4 889 aa26.77■■□□□ 1.88
PKNOX1-202ENST00000418336 SPINK5Q9NQ38 1064 aaPredicted RBP26.77■■□□□ 1.88
PKNOX1-202ENST00000418336 FAM177BA6PVY3 158 aa26.76■■□□□ 1.87
PKNOX1-202ENST00000418336 AIMP1Q12904 312 aaKnown RBP26.76■■□□□ 1.87
PKNOX1-202ENST00000418336 ERFEQ4G0M1 354 aa26.76■■□□□ 1.87
PKNOX1-202ENST00000418336 STYK1Q6J9G0 422 aa26.76■■□□□ 1.87
PKNOX1-202ENST00000418336 NUTM1Q86Y26 1132 aa26.76■■□□□ 1.87
PKNOX1-202ENST00000418336 ZNF521Q96K83 1311 aa26.75■■□□□ 1.87
PKNOX1-202ENST00000418336 CRY2Q49AN0 593 aa26.75■■□□□ 1.87
PKNOX1-202ENST00000418336 WDR63Q8IWG1 891 aa26.74■■□□□ 1.87
PKNOX1-202ENST00000418336 MASTLQ96GX5 879 aa26.74■■□□□ 1.87
PKNOX1-202ENST00000418336 CACNA1SQ13698 1873 aa26.74■■□□□ 1.87
PKNOX1-202ENST00000418336 FER1L6Q2WGJ9 1857 aa26.74■■□□□ 1.87
PKNOX1-202ENST00000418336 FANCIQ9NVI1 1328 aa26.73■■□□□ 1.87
PKNOX1-202ENST00000418336 C7orf43Q8WVR3 580 aa26.73■■□□□ 1.87
PKNOX1-202ENST00000418336 ZNF622Q969S3 477 aaKnown RBP eCLIP26.73■■□□□ 1.87
PKNOX1-202ENST00000418336 NYXQ9GZU5 481 aa26.73■■□□□ 1.87
PKNOX1-202ENST00000418336 HYPKQ9NX55 129 aa26.73■■□□□ 1.87
PKNOX1-202ENST00000418336 NFKBIEO00221 500 aa26.72■■□□□ 1.87
PKNOX1-202ENST00000418336 TCIRG1Q13488 830 aa26.72■■□□□ 1.87
PKNOX1-202ENST00000418336 PARP10Q53GL7 1025 aa26.72■■□□□ 1.87
PKNOX1-202ENST00000418336 C3orf67Q6ZVT6 689 aa26.72■■□□□ 1.87
PKNOX1-202ENST00000418336 PLBD2Q8NHP8 589 aa26.72■■□□□ 1.87
PKNOX1-202ENST00000418336 PHAXQ9H814 394 aaKnown RBP26.72■■□□□ 1.87
PKNOX1-202ENST00000418336 SALL2Q9Y467 1007 aaPredicted RBP26.72■■□□□ 1.87
PKNOX1-202ENST00000418336 NLRP10Q86W26 655 aa26.71■■□□□ 1.87
PKNOX1-202ENST00000418336 SNED1Q8TER0 1413 aa26.71■■□□□ 1.87
PKNOX1-202ENST00000418336 RASSF7Q02833 373 aa26.7■■□□□ 1.86
PKNOX1-202ENST00000418336 NPHP1O15259 732 aa26.69■■□□□ 1.86
PKNOX1-202ENST00000418336 NPR1P16066 1061 aa26.69■■□□□ 1.86
PKNOX1-202ENST00000418336 PRPF40BQ6NWY9 871 aaKnown RBP26.69■■□□□ 1.86
PKNOX1-202ENST00000418336 ANKRD13DQ6ZTN6 518 aa26.69■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 131 ms