RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 KCNMA1Q12791 1236 aa6.97□□□□□ -1.29
HMGB3P20-201ENST00000417997 PTK7Q13308 1070 aa6.97□□□□□ -1.29
HMGB3P20-201ENST00000417997 TMEM151AQ8N4L1 468 aa6.97□□□□□ -1.29
HMGB3P20-201ENST00000417997 GOLGA6L1Q8N7Z2 621 aa6.97□□□□□ -1.29
HMGB3P20-201ENST00000417997 NGLY1Q96IV0 654 aa6.97□□□□□ -1.29
HMGB3P20-201ENST00000417997 PHACTR1Q9C0D0 580 aa6.97□□□□□ -1.29
HMGB3P20-201ENST00000417997 RRAGCQ9HB90 399 aa6.97□□□□□ -1.29
HMGB3P20-201ENST00000417997 GGA1Q9UJY5 639 aa6.97□□□□□ -1.29
HMGB3P20-201ENST00000417997 GDF2Q9UK05 429 aaPredicted RBP6.97□□□□□ -1.29
HMGB3P20-201ENST00000417997 PRR12Q9ULL5 1215 aa6.97□□□□□ -1.29
HMGB3P20-201ENST00000417997 ATAD2Q6PL18 1390 aa6.96□□□□□ -1.29
HMGB3P20-201ENST00000417997 DKK1O94907 266 aa6.96□□□□□ -1.3
HMGB3P20-201ENST00000417997 GDF11O95390 407 aa6.96□□□□□ -1.3
HMGB3P20-201ENST00000417997 ANKMY2Q8IV38 441 aa6.96□□□□□ -1.3
HMGB3P20-201ENST00000417997 EDARADDQ8WWZ3 215 aa6.96□□□□□ -1.3
HMGB3P20-201ENST00000417997 DNMT3AQ9Y6K1 912 aaPredicted RBP6.96□□□□□ -1.3
HMGB3P20-201ENST00000417997 CNTNAP5Q8WYK1 1306 aa6.96□□□□□ -1.3
HMGB3P20-201ENST00000417997 FAM196BA6NMK8 535 aa6.95□□□□□ -1.3
HMGB3P20-201ENST00000417997 NEURL1BA8MQ27 555 aa6.95□□□□□ -1.3
HMGB3P20-201ENST00000417997 FAM157BP0CG42 384 aa6.95□□□□□ -1.3
HMGB3P20-201ENST00000417997 CFAP70Q5T0N1 1121 aa6.95□□□□□ -1.3
HMGB3P20-201ENST00000417997 GAS2L2Q8NHY3 880 aa6.95□□□□□ -1.3
HMGB3P20-201ENST00000417997 HSH2DQ96JZ2 352 aa6.95□□□□□ -1.3
HMGB3P20-201ENST00000417997 MARK1Q9P0L2 795 aa6.95□□□□□ -1.3
HMGB3P20-201ENST00000417997 PHF20L1A8MW92 1017 aa6.94□□□□□ -1.3
HMGB3P20-201ENST00000417997 SHISA8B8ZZ34 492 aa6.94□□□□□ -1.3
HMGB3P20-201ENST00000417997 C21orf2O43822 256 aa6.94□□□□□ -1.3
HMGB3P20-201ENST00000417997 SAMD5Q5TGI4 173 aa6.94□□□□□ -1.3
HMGB3P20-201ENST00000417997 C1orf229Q6ZS94 237 aaPredicted RBP6.94□□□□□ -1.3
HMGB3P20-201ENST00000417997 KCTD17Q8N5Z5 321 aa6.94□□□□□ -1.3
HMGB3P20-201ENST00000417997 ZMYND15Q9H091 742 aa6.94□□□□□ -1.3
HMGB3P20-201ENST00000417997 STRN4Q9NRL3 753 aa6.94□□□□□ -1.3
HMGB3P20-201ENST00000417997 DCAF1Q9Y4B6 1507 aa6.93□□□□□ -1.3
HMGB3P20-201ENST00000417997 ARAFP10398 606 aa6.93□□□□□ -1.3
HMGB3P20-201ENST00000417997 PCBP4P57723 403 aaKnown RBP6.93□□□□□ -1.3
HMGB3P20-201ENST00000417997 C1orf53Q5VUE5 145 aa6.93□□□□□ -1.3
HMGB3P20-201ENST00000417997 SLCO4C1Q6ZQN7 724 aa6.93□□□□□ -1.3
HMGB3P20-201ENST00000417997 ALDH16A1Q8IZ83 802 aa6.93□□□□□ -1.3
HMGB3P20-201ENST00000417997 BEND7Q8N7W2 519 aaPredicted RBP6.93□□□□□ -1.3
HMGB3P20-201ENST00000417997 CEP63Q96MT8 703 aa6.93□□□□□ -1.3
HMGB3P20-201ENST00000417997 LRRC4BQ9NT99 713 aa6.93□□□□□ -1.3
HMGB3P20-201ENST00000417997 ANKIB1Q9P2G1 1089 aa6.93□□□□□ -1.3
HMGB3P20-201ENST00000417997 HCN2Q9UL51 889 aa6.93□□□□□ -1.3
HMGB3P20-201ENST00000417997 GTF3C3Q9Y5Q9 886 aa6.93□□□□□ -1.3
HMGB3P20-201ENST00000417997 GPC6Q9Y625 555 aaPredicted RBP6.93□□□□□ -1.3
HMGB3P20-201ENST00000417997 ABCC9O60706 1549 aa6.92□□□□□ -1.3
HMGB3P20-201ENST00000417997 ADH6P28332 368 aa6.92□□□□□ -1.3
HMGB3P20-201ENST00000417997 GSK3AP49840 483 aa6.92□□□□□ -1.3
HMGB3P20-201ENST00000417997 HIRAP54198 1017 aaPredicted RBP6.92□□□□□ -1.3
HMGB3P20-201ENST00000417997 FAM182BQ5T319 152 aa6.92□□□□□ -1.3
HMGB3P20-201ENST00000417997 KANK3Q6NY19 840 aa6.92□□□□□ -1.3
HMGB3P20-201ENST00000417997 FAM200AQ8TCP9 573 aa6.92□□□□□ -1.3
HMGB3P20-201ENST00000417997 C2orf49Q9BVC5 232 aaPredicted RBP6.92□□□□□ -1.3
HMGB3P20-201ENST00000417997 EFSO43281 561 aa6.91□□□□□ -1.3
HMGB3P20-201ENST00000417997 EPXP11678 715 aa6.91□□□□□ -1.3
HMGB3P20-201ENST00000417997 SNRPNP63162 240 aaKnown RBP6.91□□□□□ -1.3
HMGB3P20-201ENST00000417997 SFSWAPQ12872 951 aaKnown RBP6.91□□□□□ -1.3
HMGB3P20-201ENST00000417997 LAMC2Q13753 1193 aa6.91□□□□□ -1.3
HMGB3P20-201ENST00000417997 GRIN2CQ14957 1233 aa6.91□□□□□ -1.3
HMGB3P20-201ENST00000417997 ZNF280CQ8ND82 737 aa6.91□□□□□ -1.3
HMGB3P20-201ENST00000417997 VTI1AQ96AJ9 217 aa6.91□□□□□ -1.3
HMGB3P20-201ENST00000417997 SUSD3Q96L08 255 aa6.91□□□□□ -1.3
HMGB3P20-201ENST00000417997 IGFBP4P22692 258 aa6.9□□□□□ -1.3
HMGB3P20-201ENST00000417997 ZNF468Q5VIY5 522 aaPredicted RBP6.9□□□□□ -1.3
HMGB3P20-201ENST00000417997 C7orf43Q8WVR3 580 aa6.9□□□□□ -1.3
HMGB3P20-201ENST00000417997 CCDC97Q96F63 343 aaPredicted RBP6.9□□□□□ -1.3
HMGB3P20-201ENST00000417997 BRD7Q9NPI1 651 aa6.9□□□□□ -1.3
HMGB3P20-201ENST00000417997 MKL2Q9ULH7 1088 aa6.9□□□□□ -1.3
HMGB3P20-201ENST00000417997 NOVA2Q9UNW9 492 aaKnown RBP6.9□□□□□ -1.3
HMGB3P20-201ENST00000417997 SYT9Q86SS6 491 aa6.89□□□□□ -1.31
HMGB3P20-201ENST00000417997 STAG2Q8N3U4 1231 aa6.89□□□□□ -1.31
HMGB3P20-201ENST00000417997 BTBD6Q96KE9 485 aa6.89□□□□□ -1.31
HMGB3P20-201ENST00000417997 ARXQ96QS3 562 aa6.89□□□□□ -1.31
HMGB3P20-201ENST00000417997 KLF15Q9UIH9 416 aa6.89□□□□□ -1.31
HMGB3P20-201ENST00000417997 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.88□□□□□ -1.31
HMGB3P20-201ENST00000417997 POTEAQ6S8J7 498 aa6.88□□□□□ -1.31
HMGB3P20-201ENST00000417997 RAB44Q7Z6P3 723 aaPredicted RBP6.88□□□□□ -1.31
HMGB3P20-201ENST00000417997 FCHSD1Q86WN1 690 aa6.88□□□□□ -1.31
HMGB3P20-201ENST00000417997 AVENQ9NQS1 362 aaPredicted RBP6.88□□□□□ -1.31
HMGB3P20-201ENST00000417997 ARID3CA6NKF2 412 aa6.87□□□□□ -1.31
HMGB3P20-201ENST00000417997 TYRO3Q06418 890 aa6.87□□□□□ -1.31
HMGB3P20-201ENST00000417997 SPEM2Q0P670 501 aa6.87□□□□□ -1.31
HMGB3P20-201ENST00000417997 NEUROD1Q13562 356 aa6.87□□□□□ -1.31
HMGB3P20-201ENST00000417997 HIF1AQ16665 826 aa6.87□□□□□ -1.31
HMGB3P20-201ENST00000417997 RTN1Q16799 776 aa6.87□□□□□ -1.31
HMGB3P20-201ENST00000417997 GPAT2Q6NUI2 795 aa6.87□□□□□ -1.31
HMGB3P20-201ENST00000417997 SLC30A3Q99726 388 aa6.87□□□□□ -1.31
HMGB3P20-201ENST00000417997 KCNH4Q9UQ05 1017 aa6.87□□□□□ -1.31
HMGB3P20-201ENST00000417997 TBC1D8BQ0IIM8 1120 aa6.86□□□□□ -1.31
HMGB3P20-201ENST00000417997 CHSY3Q70JA7 882 aa6.86□□□□□ -1.31
HMGB3P20-201ENST00000417997 BTLAQ7Z6A9 289 aa6.86□□□□□ -1.31
HMGB3P20-201ENST00000417997 PRIMPOLQ96LW4 560 aa6.86□□□□□ -1.31
HMGB3P20-201ENST00000417997 KLK14Q9P0G3 267 aa6.86□□□□□ -1.31
HMGB3P20-201ENST00000417997 PRMT3O60678 531 aa6.85□□□□□ -1.31
HMGB3P20-201ENST00000417997 ALAS2P22557 587 aa6.85□□□□□ -1.31
HMGB3P20-201ENST00000417997 WEE1P30291 646 aa6.85□□□□□ -1.31
HMGB3P20-201ENST00000417997 DGKZQ13574 1117 aa6.85□□□□□ -1.31
HMGB3P20-201ENST00000417997 BHMTQ93088 406 aa6.85□□□□□ -1.31
HMGB3P20-201ENST00000417997 DCAF5Q96JK2 942 aa6.85□□□□□ -1.31
HMGB3P20-201ENST00000417997 IGFLR1Q9H665 355 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms