RNA–Protein interactions for RNA: ENST00000417239.1

SMIM12-201, Transcript of small integral membrane protein 12, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SMIM12, Length 684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM12-201ENST00000417239 CNKSR1Q969H4 720 aa12.07□□□□□ -0.48
SMIM12-201ENST00000417239 RNF123Q5XPI4 1314 aa12.07□□□□□ -0.48
SMIM12-201ENST00000417239 EIF5P55010 431 aaKnown RBP12.06□□□□□ -0.48
SMIM12-201ENST00000417239 SLC39A6Q13433 755 aa12.06□□□□□ -0.48
SMIM12-201ENST00000417239 PNMA8AQ86V59 439 aaPredicted RBP12.06□□□□□ -0.48
SMIM12-201ENST00000417239 C7orf43Q8WVR3 580 aa12.06□□□□□ -0.48
SMIM12-201ENST00000417239 CAPNS2Q96L46 248 aa12.06□□□□□ -0.48
SMIM12-201ENST00000417239 CANXP27824 592 aaKnown RBP12.05□□□□□ -0.48
SMIM12-201ENST00000417239 VSIG10Q8N0Z9 540 aa12.05□□□□□ -0.48
SMIM12-201ENST00000417239 BEGAINQ9BUH8 593 aa12.05□□□□□ -0.48
SMIM12-201ENST00000417239 MCOLN1Q9GZU1 580 aa12.05□□□□□ -0.48
SMIM12-201ENST00000417239 DDX21Q9NR30 783 aaKnown RBP eCLIP12.05□□□□□ -0.48
SMIM12-201ENST00000417239 TSKSQ9UJT2 592 aa12.05□□□□□ -0.48
SMIM12-201ENST00000417239 COL4A5P29400 1685 aa12.05□□□□□ -0.48
SMIM12-201ENST00000417239 ECE1P42892 770 aa12.04□□□□□ -0.48
SMIM12-201ENST00000417239 AKAP4Q5JQC9 854 aa12.04□□□□□ -0.48
SMIM12-201ENST00000417239 CYP4F22Q6NT55 531 aa12.04□□□□□ -0.48
SMIM12-201ENST00000417239 CFAP44Q96MT7 982 aa12.04□□□□□ -0.48
SMIM12-201ENST00000417239 GPR101Q96P66 508 aaPredicted RBP12.04□□□□□ -0.48
SMIM12-201ENST00000417239 LGR6Q9HBX8 967 aa12.04□□□□□ -0.48
SMIM12-201ENST00000417239 SNED1Q8TER0 1413 aa12.03□□□□□ -0.48
SMIM12-201ENST00000417239 A0A087WZG4 1122 aa12.03□□□□□ -0.48
SMIM12-201ENST00000417239 FKBP4Q02790 459 aaKnown RBP eCLIP12.03□□□□□ -0.48
SMIM12-201ENST00000417239 FMR1Q06787 632 aaKnown RBP eCLIP12.03□□□□□ -0.48
SMIM12-201ENST00000417239 CCDC93Q567U6 631 aa12.03□□□□□ -0.48
SMIM12-201ENST00000417239 SULT6B1Q6IMI4 303 aa12.03□□□□□ -0.48
SMIM12-201ENST00000417239 CNBD1Q8NA66 436 aa12.03□□□□□ -0.48
SMIM12-201ENST00000417239 MASTLQ96GX5 879 aa12.03□□□□□ -0.48
SMIM12-201ENST00000417239 ZNF277Q9NRM2 450 aaPredicted RBP12.03□□□□□ -0.48
SMIM12-201ENST00000417239 FZD9O00144 591 aa12.02□□□□□ -0.49
SMIM12-201ENST00000417239 RNMTO43148 476 aaKnown RBP12.02□□□□□ -0.49
SMIM12-201ENST00000417239 PAXIP1Q6ZW49 1069 aaPredicted RBP12.02□□□□□ -0.49
SMIM12-201ENST00000417239 GPC2Q8N158 579 aa12.02□□□□□ -0.49
SMIM12-201ENST00000417239 AOC2O75106 756 aa12.01□□□□□ -0.49
SMIM12-201ENST00000417239 ST5P78524 1137 aa12.01□□□□□ -0.49
SMIM12-201ENST00000417239 GRM1Q13255 1194 aa12.01□□□□□ -0.49
SMIM12-201ENST00000417239 CST9Q5W186 159 aa12.01□□□□□ -0.49
SMIM12-201ENST00000417239 TBC1D2BQ9UPU7 963 aa12.01□□□□□ -0.49
SMIM12-201ENST00000417239 CA12O43570 354 aa12□□□□□ -0.49
SMIM12-201ENST00000417239 STARD3NLO95772 234 aa12□□□□□ -0.49
SMIM12-201ENST00000417239 MAP2K2P36507 400 aa12□□□□□ -0.49
SMIM12-201ENST00000417239 OLFM4Q6UX06 510 aa12□□□□□ -0.49
SMIM12-201ENST00000417239 SETDB2Q96T68 719 aa12□□□□□ -0.49
SMIM12-201ENST00000417239 TLL2Q9Y6L7 1015 aa12□□□□□ -0.49
SMIM12-201ENST00000417239 CAMTA2O94983 1202 aa11.99□□□□□ -0.49
SMIM12-201ENST00000417239 IARSP41252 1262 aaKnown RBP11.99□□□□□ -0.49
SMIM12-201ENST00000417239 DGKZQ13574 1117 aa11.99□□□□□ -0.49
SMIM12-201ENST00000417239 AKAP11Q9UKA4 1901 aa11.98□□□□□ -0.49
SMIM12-201ENST00000417239 HEG1Q9ULI3 1381 aa11.98□□□□□ -0.49
SMIM12-201ENST00000417239 TRAF5O00463 557 aa11.98□□□□□ -0.49
SMIM12-201ENST00000417239 NPHP1O15259 732 aa11.98□□□□□ -0.49
SMIM12-201ENST00000417239 NPR1P16066 1061 aa11.98□□□□□ -0.49
SMIM12-201ENST00000417239 IL13P35225 146 aa11.98□□□□□ -0.49
SMIM12-201ENST00000417239 IL6STP40189 918 aaPredicted RBP11.98□□□□□ -0.49
SMIM12-201ENST00000417239 ZNF330Q9Y3S2 320 aaPredicted RBP11.98□□□□□ -0.49
SMIM12-201ENST00000417239 KLRG2A4D1S0 409 aaPredicted RBP11.97□□□□□ -0.49
SMIM12-201ENST00000417239 SCNN1DP51172 638 aa11.97□□□□□ -0.49
SMIM12-201ENST00000417239 BRPF1P55201 1214 aaPredicted RBP11.97□□□□□ -0.49
SMIM12-201ENST00000417239 PRPF38BQ5VTL8 546 aaKnown RBP11.97□□□□□ -0.49
SMIM12-201ENST00000417239 RTKN2Q8IZC4 609 aa11.97□□□□□ -0.49
SMIM12-201ENST00000417239 SAPCD2Q86UD0 394 aa11.96□□□□□ -0.49
SMIM12-201ENST00000417239 SYNE4Q8N205 404 aa11.96□□□□□ -0.49
SMIM12-201ENST00000417239 ZNF496Q96IT1 587 aaPredicted RBP11.96□□□□□ -0.49
SMIM12-201ENST00000417239 NUP98P52948 1817 aa11.95□□□□□ -0.5
SMIM12-201ENST00000417239 LMOD1P29536 600 aaPredicted RBP11.95□□□□□ -0.5
SMIM12-201ENST00000417239 EPS15P42566 896 aa11.95□□□□□ -0.5
SMIM12-201ENST00000417239 USP50Q70EL3 339 aaPredicted RBP11.95□□□□□ -0.5
SMIM12-201ENST00000417239 TTC5Q8N0Z6 440 aa11.95□□□□□ -0.5
SMIM12-201ENST00000417239 HHIPL1Q96JK4 782 aa11.95□□□□□ -0.5
SMIM12-201ENST00000417239 PSMD1Q99460 953 aa11.95□□□□□ -0.5
SMIM12-201ENST00000417239 GJA3Q9Y6H8 435 aa11.95□□□□□ -0.5
SMIM12-201ENST00000417239 LAMB4A4D0S4 1761 aa11.95□□□□□ -0.5
SMIM12-201ENST00000417239 SOX10P56693 466 aa11.94□□□□□ -0.5
SMIM12-201ENST00000417239 MTHFSDQ2M296 383 aaKnown RBP11.94□□□□□ -0.5
SMIM12-201ENST00000417239 NBPF5PQ86XG9 351 aaPredicted RBP11.94□□□□□ -0.5
SMIM12-201ENST00000417239 DZIP3Q86Y13 1208 aaKnown RBP11.94□□□□□ -0.5
SMIM12-201ENST00000417239 JDP2Q8WYK2 163 aa11.94□□□□□ -0.5
SMIM12-201ENST00000417239 TEX13AQ9BXU3 409 aaPredicted RBP11.94□□□□□ -0.5
SMIM12-201ENST00000417239 A1BGP04217 495 aa11.93□□□□□ -0.5
SMIM12-201ENST00000417239 EIF6P56537 245 aaKnown RBP11.93□□□□□ -0.5
SMIM12-201ENST00000417239 CIAPIN1Q6FI81 312 aa11.93□□□□□ -0.5
SMIM12-201ENST00000417239 ZNF790Q6PG37 636 aa11.93□□□□□ -0.5
SMIM12-201ENST00000417239 HMOX1P09601 288 aa11.92□□□□□ -0.5
SMIM12-201ENST00000417239 CLEC4GQ6UXB4 293 aa11.92□□□□□ -0.5
SMIM12-201ENST00000417239 MKI67P46013 3256 aaKnown RBP11.92□□□□□ -0.5
SMIM12-201ENST00000417239 POLR2AP24928 1970 aaKnown RBP11.91□□□□□ -0.5
SMIM12-201ENST00000417239 CELF2O95319 508 aaKnown RBP11.91□□□□□ -0.5
SMIM12-201ENST00000417239 ALDH1B1P30837 517 aa11.91□□□□□ -0.5
SMIM12-201ENST00000417239 MORC1Q86VD1 984 aa11.91□□□□□ -0.5
SMIM12-201ENST00000417239 RIC1Q4ADV7 1423 aa11.9□□□□□ -0.5
SMIM12-201ENST00000417239 NPM2Q86SE8 214 aaKnown RBP11.9□□□□□ -0.5
SMIM12-201ENST00000417239 ZIC5Q96T25 663 aa11.9□□□□□ -0.5
SMIM12-201ENST00000417239 ADARB2Q9NS39 739 aaKnown RBP11.9□□□□□ -0.5
SMIM12-201ENST00000417239 GPRC5DQ9NZD1 345 aa11.9□□□□□ -0.5
SMIM12-201ENST00000417239 LAMB2P55268 1798 aa11.9□□□□□ -0.51
SMIM12-201ENST00000417239 PIP4K2AP48426 406 aaPredicted RBP11.89□□□□□ -0.51
SMIM12-201ENST00000417239 NOGQ13253 232 aa11.89□□□□□ -0.51
SMIM12-201ENST00000417239 CRY2Q49AN0 593 aa11.89□□□□□ -0.51
SMIM12-201ENST00000417239 TPTE2Q6XPS3 522 aa11.89□□□□□ -0.51
SMIM12-201ENST00000417239 FMNL2Q96PY5 1086 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 100.6 ms