RNA–Protein interactions for RNA: ENST00000417012.5

LRRTM1-205, Transcript of leucine rich repeat transmembrane neuronal 1, humanhuman

TSL 1 (best)

Gene LRRTM1, Length 3,021 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1-205ENST00000417012 USP25Q9UHP3 1055 aa15.4■□□□□ 0.06
LRRTM1-205ENST00000417012 ZC3H6P61129 1189 aaKnown RBP15.39■□□□□ 0.05
LRRTM1-205ENST00000417012 ZSCAN22P10073 491 aaPredicted RBP15.39■□□□□ 0.05
LRRTM1-205ENST00000417012 SSH3Q8TE77 659 aa15.39■□□□□ 0.05
LRRTM1-205ENST00000417012 BABAM1Q9NWV8 329 aa15.39■□□□□ 0.05
LRRTM1-205ENST00000417012 CNPY2Q9Y2B0 182 aa15.39■□□□□ 0.05
LRRTM1-205ENST00000417012 N4BP2Q86UW6 1770 aaPredicted RBP15.39■□□□□ 0.05
LRRTM1-205ENST00000417012 PXDNQ92626 1479 aa15.39■□□□□ 0.05
LRRTM1-205ENST00000417012 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.38■□□□□ 0.05
LRRTM1-205ENST00000417012 ATP6V1DQ9Y5K8 247 aa15.38■□□□□ 0.05
LRRTM1-205ENST00000417012 SGSM2O43147 1006 aa15.38■□□□□ 0.05
LRRTM1-205ENST00000417012 SURF6O75683 361 aaKnown RBP15.38■□□□□ 0.05
LRRTM1-205ENST00000417012 UBE2HP62256 183 aa15.38■□□□□ 0.05
LRRTM1-205ENST00000417012 AKAP4Q5JQC9 854 aa15.38■□□□□ 0.05
LRRTM1-205ENST00000417012 TCHHQ07283 1943 aa15.38■□□□□ 0.05
LRRTM1-205ENST00000417012 MAP4K4O95819 1239 aaPredicted RBP15.38■□□□□ 0.05
LRRTM1-205ENST00000417012 PLEKHO1Q53GL0 409 aaPredicted RBP15.38■□□□□ 0.05
LRRTM1-205ENST00000417012 CNTROBQ8N137 903 aa15.38■□□□□ 0.05
LRRTM1-205ENST00000417012 SNX14Q9Y5W7 946 aa15.38■□□□□ 0.05
LRRTM1-205ENST00000417012 PRAMEF22A3QJZ6 481 aa15.37■□□□□ 0.05
LRRTM1-205ENST00000417012 STX6O43752 255 aa15.37■□□□□ 0.05
LRRTM1-205ENST00000417012 PIBF1Q8WXW3 757 aa15.37■□□□□ 0.05
LRRTM1-205ENST00000417012 LIMCH1Q9UPQ0 1083 aa15.37■□□□□ 0.05
LRRTM1-205ENST00000417012 RGPD5Q99666 1765 aa15.37■□□□□ 0.05
LRRTM1-205ENST00000417012 HCLS1P14317 486 aaPredicted RBP15.37■□□□□ 0.05
LRRTM1-205ENST00000417012 SMC3Q9UQE7 1217 aa15.37■□□□□ 0.05
LRRTM1-205ENST00000417012 PI4KAP2A4QPH2 592 aa15.36■□□□□ 0.05
LRRTM1-205ENST00000417012 ADCY5O95622 1261 aa15.36■□□□□ 0.05
LRRTM1-205ENST00000417012 AK2P54819 239 aa15.36■□□□□ 0.05
LRRTM1-205ENST00000417012 TPRNQ4KMQ1 711 aa15.36■□□□□ 0.05
LRRTM1-205ENST00000417012 C1orf141Q5JVX7 400 aa15.36■□□□□ 0.05
LRRTM1-205ENST00000417012 PI4KAP1Q8N8J0 262 aa15.36■□□□□ 0.05
LRRTM1-205ENST00000417012 RHPN1Q8TCX5 695 aa15.36■□□□□ 0.05
LRRTM1-205ENST00000417012 TTC14Q96N46 770 aa15.36■□□□□ 0.05
LRRTM1-205ENST00000417012 NBPF7P0C2Y1 421 aaPredicted RBP15.36■□□□□ 0.05
LRRTM1-205ENST00000417012 PPP1R42Q7Z4L9 355 aa15.36■□□□□ 0.05
LRRTM1-205ENST00000417012 PI4K2BQ8TCG2 481 aa15.36■□□□□ 0.05
LRRTM1-205ENST00000417012 KIF1BPQ96EK5 621 aa15.36■□□□□ 0.05
LRRTM1-205ENST00000417012 RNMTO43148 476 aaKnown RBP15.35■□□□□ 0.05
LRRTM1-205ENST00000417012 SYT1P21579 422 aa15.35■□□□□ 0.05
LRRTM1-205ENST00000417012 MPNDQ8N594 471 aa15.35■□□□□ 0.05
LRRTM1-205ENST00000417012 MYRIPQ8NFW9 859 aa15.35■□□□□ 0.05
LRRTM1-205ENST00000417012 PRIMPOLQ96LW4 560 aa15.35■□□□□ 0.05
LRRTM1-205ENST00000417012 FIBPO43427 364 aa15.35■□□□□ 0.05
LRRTM1-205ENST00000417012 F13A1P00488 732 aa15.35■□□□□ 0.05
LRRTM1-205ENST00000417012 KDM3BQ7LBC6 1761 aa15.35■□□□□ 0.05
LRRTM1-205ENST00000417012 HMGN5P82970 282 aaKnown RBP15.35■□□□□ 0.05
LRRTM1-205ENST00000417012 ZNF830Q96NB3 372 aaPredicted RBP15.35■□□□□ 0.05
LRRTM1-205ENST00000417012 LSG1Q9H089 658 aaKnown RBP15.35■□□□□ 0.05
LRRTM1-205ENST00000417012 MED1Q15648 1581 aaPredicted RBP15.34■□□□□ 0.05
LRRTM1-205ENST00000417012 POLA2Q14181 598 aa15.34■□□□□ 0.05
LRRTM1-205ENST00000417012 NOLC1Q14978 699 aaKnown RBP eCLIP15.34■□□□□ 0.05
LRRTM1-205ENST00000417012 RUFY3Q7L099 469 aa15.34■□□□□ 0.05
LRRTM1-205ENST00000417012 LMO7Q8WWI1 1683 aa15.34■□□□□ 0.05
LRRTM1-205ENST00000417012 SRGAP3O43295 1099 aa15.34■□□□□ 0.05
LRRTM1-205ENST00000417012 PROSER3Q2NL68 480 aa15.34■□□□□ 0.05
LRRTM1-205ENST00000417012 C19orf44Q9H6X5 657 aa15.34■□□□□ 0.05
LRRTM1-205ENST00000417012 C1orf167Q5SNV9 1468 aa15.33■□□□□ 0.05
LRRTM1-205ENST00000417012 AMOTQ4VCS5 1084 aa15.33■□□□□ 0.05
LRRTM1-205ENST00000417012 TTC12Q9H892 705 aaPredicted RBP15.33■□□□□ 0.05
LRRTM1-205ENST00000417012 PHRF1Q9P1Y6 1649 aaKnown RBP15.33■□□□□ 0.04
LRRTM1-205ENST00000417012 CWC27Q6UX04 472 aaKnown RBP15.33■□□□□ 0.04
LRRTM1-205ENST00000417012 RASEFQ8IZ41 740 aa15.33■□□□□ 0.04
LRRTM1-205ENST00000417012 CABLES1Q8TDN4 633 aa15.33■□□□□ 0.04
LRRTM1-205ENST00000417012 ARID3AQ99856 593 aa15.33■□□□□ 0.04
LRRTM1-205ENST00000417012 SLIT3O75094 1523 aa15.33■□□□□ 0.04
LRRTM1-205ENST00000417012 CASTP20810 708 aaKnown RBP15.33■□□□□ 0.04
LRRTM1-205ENST00000417012 KLHL34Q8N239 644 aa15.33■□□□□ 0.04
LRRTM1-205ENST00000417012 DNAAF4Q8WXU2 420 aa15.33■□□□□ 0.04
LRRTM1-205ENST00000417012 LARP6Q9BRS8 491 aaKnown RBP15.33■□□□□ 0.04
LRRTM1-205ENST00000417012 TRPM3Q9HCF6 1732 aaPredicted RBP15.32■□□□□ 0.04
LRRTM1-205ENST00000417012 KDM4AO75164 1064 aa15.32■□□□□ 0.04
LRRTM1-205ENST00000417012 HSP90AB4PQ58FF6 505 aa15.32■□□□□ 0.04
LRRTM1-205ENST00000417012 BEND3Q5T5X7 828 aa15.32■□□□□ 0.04
LRRTM1-205ENST00000417012 PLCB2Q00722 1185 aa15.32■□□□□ 0.04
LRRTM1-205ENST00000417012 DIAPH3Q9NSV4 1193 aa15.32■□□□□ 0.04
LRRTM1-205ENST00000417012 RUFY2Q8WXA3 655 aa15.31■□□□□ 0.04
LRRTM1-205ENST00000417012 SPG7Q9UQ90 795 aa15.31■□□□□ 0.04
LRRTM1-205ENST00000417012 ADCY9O60503 1353 aa15.31■□□□□ 0.04
LRRTM1-205ENST00000417012 GIGYF1O75420 1035 aaPredicted RBP15.3■□□□□ 0.04
LRRTM1-205ENST00000417012 GLRX3O76003 335 aaKnown RBP15.3■□□□□ 0.04
LRRTM1-205ENST00000417012 NLRP2Q9NX02 1062 aa15.3■□□□□ 0.04
LRRTM1-205ENST00000417012 ERBB3P21860 1342 aa15.3■□□□□ 0.04
LRRTM1-205ENST00000417012 GJB2P29033 226 aa15.3■□□□□ 0.04
LRRTM1-205ENST00000417012 SLC39A6Q13433 755 aa15.3■□□□□ 0.04
LRRTM1-205ENST00000417012 OS9Q13438 667 aaPredicted RBP15.3■□□□□ 0.04
LRRTM1-205ENST00000417012 GIMAP6Q6P9H5 292 aa15.3■□□□□ 0.04
LRRTM1-205ENST00000417012 CCDC83Q8IWF9 413 aa15.3■□□□□ 0.04
LRRTM1-205ENST00000417012 ATF3P18847 181 aa15.3■□□□□ 0.04
LRRTM1-205ENST00000417012 SH2B1Q9NRF2 756 aaPredicted RBP15.3■□□□□ 0.04
LRRTM1-205ENST00000417012 SPTLC3Q9NUV7 552 aa15.3■□□□□ 0.04
LRRTM1-205ENST00000417012 HYPKQ9NX55 129 aa15.3■□□□□ 0.04
LRRTM1-205ENST00000417012 TTC41PQ6P2S7 1318 aa15.29■□□□□ 0.04
LRRTM1-205ENST00000417012 HOXB7P09629 217 aa15.29■□□□□ 0.04
LRRTM1-205ENST00000417012 CPA1P15085 419 aa15.29■□□□□ 0.04
LRRTM1-205ENST00000417012 ZSCAN31Q96LW9 406 aaPredicted RBP15.29■□□□□ 0.04
LRRTM1-205ENST00000417012 JAKMIP1Q96N16 626 aaKnown RBP15.29■□□□□ 0.04
LRRTM1-205ENST00000417012 FUCA2Q9BTY2 467 aa15.29■□□□□ 0.04
LRRTM1-205ENST00000417012 PDRG1Q9NUG6 133 aa15.29■□□□□ 0.04
LRRTM1-205ENST00000417012 DBF4Q9UBU7 674 aaPredicted RBP15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms