RNA–Protein interactions for RNA: ENST00000416778.5

CPNE1-210, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-210ENST00000416778 NBPF5PQ86XG9 351 aaPredicted RBP23.49■■□□□ 1.35
CPNE1-210ENST00000416778 TRIM35Q9UPQ4 493 aa23.49■■□□□ 1.35
CPNE1-210ENST00000416778 NIP7Q9Y221 180 aaKnown RBP eCLIP23.49■■□□□ 1.35
CPNE1-210ENST00000416778 ARFGEF1Q9Y6D6 1849 aa23.49■■□□□ 1.35
CPNE1-210ENST00000416778 SENP3-EIF4A1A0A087X0R7 540 aa23.48■■□□□ 1.35
CPNE1-210ENST00000416778 SRGNP10124 158 aa23.48■■□□□ 1.35
CPNE1-210ENST00000416778 PRELPP51888 382 aa23.48■■□□□ 1.35
CPNE1-210ENST00000416778 ST5P78524 1137 aa23.48■■□□□ 1.35
CPNE1-210ENST00000416778 RNF181Q9P0P0 153 aa23.48■■□□□ 1.35
CPNE1-210ENST00000416778 KLRG2A4D1S0 409 aaPredicted RBP23.47■■□□□ 1.35
CPNE1-210ENST00000416778 CHL1O00533 1208 aa23.47■■□□□ 1.35
CPNE1-210ENST00000416778 TTLL7Q6ZT98 887 aa23.47■■□□□ 1.35
CPNE1-210ENST00000416778 SCN7AQ01118 1682 aa23.47■■□□□ 1.35
CPNE1-210ENST00000416778 NPHP1O15259 732 aa23.46■■□□□ 1.35
CPNE1-210ENST00000416778 MYL6BP14649 208 aa23.46■■□□□ 1.35
CPNE1-210ENST00000416778 ZEB1P37275 1124 aaPredicted RBP23.46■■□□□ 1.35
CPNE1-210ENST00000416778 PDIA6Q15084 440 aa23.46■■□□□ 1.35
CPNE1-210ENST00000416778 STYK1Q6J9G0 422 aa23.46■■□□□ 1.35
CPNE1-210ENST00000416778 RASSF7Q02833 373 aa23.45■■□□□ 1.34
CPNE1-210ENST00000416778 CNKSR1Q969H4 720 aa23.45■■□□□ 1.34
CPNE1-210ENST00000416778 KDM3BQ7LBC6 1761 aa23.45■■□□□ 1.34
CPNE1-210ENST00000416778 MAP3K15Q6ZN16 1313 aa23.44■■□□□ 1.34
CPNE1-210ENST00000416778 C21orf2O43822 256 aa23.44■■□□□ 1.34
CPNE1-210ENST00000416778 LRP10Q7Z4F1 713 aa23.44■■□□□ 1.34
CPNE1-210ENST00000416778 MASTLQ96GX5 879 aa23.44■■□□□ 1.34
CPNE1-210ENST00000416778 ERBB4Q15303 1308 aa23.43■■□□□ 1.34
CPNE1-210ENST00000416778 NFKBIEO00221 500 aa23.43■■□□□ 1.34
CPNE1-210ENST00000416778 EIF2S2P20042 333 aaKnown RBP23.43■■□□□ 1.34
CPNE1-210ENST00000416778 LMNB1P20700 586 aa23.43■■□□□ 1.34
CPNE1-210ENST00000416778 NMRK2Q9NPI5 230 aa23.43■■□□□ 1.34
CPNE1-210ENST00000416778 FAM177BA6PVY3 158 aa23.42■■□□□ 1.34
CPNE1-210ENST00000416778 ZNF219Q9P2Y4 722 aaPredicted RBP23.42■■□□□ 1.34
CPNE1-210ENST00000416778 ANKRD31Q8N7Z5 1873 aa23.42■■□□□ 1.34
CPNE1-210ENST00000416778 KIF6Q6ZMV9 814 aa23.41■■□□□ 1.34
CPNE1-210ENST00000416778 C7orf43Q8WVR3 580 aa23.41■■□□□ 1.34
CPNE1-210ENST00000416778 ZNF34Q8IZ26 560 aa23.4■■□□□ 1.34
CPNE1-210ENST00000416778 ZBTB3Q9H5J0 574 aa23.4■■□□□ 1.34
CPNE1-210ENST00000416778 BCORQ6W2J9 1755 aa23.4■■□□□ 1.34
CPNE1-210ENST00000416778 TOMM70O94826 608 aa23.39■■□□□ 1.33
CPNE1-210ENST00000416778 NPR1P16066 1061 aa23.39■■□□□ 1.33
CPNE1-210ENST00000416778 PROSER3Q2NL68 480 aa23.39■■□□□ 1.33
CPNE1-210ENST00000416778 PRPF40BQ6NWY9 871 aaKnown RBP23.39■■□□□ 1.33
CPNE1-210ENST00000416778 GIGYF2Q6Y7W6 1299 aaKnown RBP23.39■■□□□ 1.33
CPNE1-210ENST00000416778 LAS1LQ9Y4W2 734 aaKnown RBP23.39■■□□□ 1.33
CPNE1-210ENST00000416778 GTF2E1P29083 439 aaPredicted RBP23.38■■□□□ 1.33
CPNE1-210ENST00000416778 KRT24Q2M2I5 525 aa23.38■■□□□ 1.33
CPNE1-210ENST00000416778 RRAGCQ9HB90 399 aa23.38■■□□□ 1.33
CPNE1-210ENST00000416778 DLEC1Q9Y238 1755 aa23.37■■□□□ 1.33
CPNE1-210ENST00000416778 KDM2BQ8NHM5 1336 aa23.37■■□□□ 1.33
CPNE1-210ENST00000416778 SBF1O95248 1867 aa23.37■■□□□ 1.33
CPNE1-210ENST00000416778 APAF1O14727 1248 aa23.37■■□□□ 1.33
CPNE1-210ENST00000416778 ANXA1P04083 346 aa23.37■■□□□ 1.33
CPNE1-210ENST00000416778 SUSD4Q5VX71 490 aa23.37■■□□□ 1.33
CPNE1-210ENST00000416778 NYXQ9GZU5 481 aa23.37■■□□□ 1.33
CPNE1-210ENST00000416778 CEP350Q5VT06 3117 aa23.37■■□□□ 1.33
CPNE1-210ENST00000416778 ZC3H4Q9UPT8 1303 aaKnown RBP23.36■■□□□ 1.33
CPNE1-210ENST00000416778 GPTP24298 496 aa23.36■■□□□ 1.33
CPNE1-210ENST00000416778 ERFEQ4G0M1 354 aa23.36■■□□□ 1.33
CPNE1-210ENST00000416778 NUTM1Q86Y26 1132 aa23.36■■□□□ 1.33
CPNE1-210ENST00000416778 NECTIN2Q92692 538 aa23.36■■□□□ 1.33
CPNE1-210ENST00000416778 CFAP44Q96MT7 982 aa23.36■■□□□ 1.33
CPNE1-210ENST00000416778 HSPA6P17066 643 aa23.35■■□□□ 1.33
CPNE1-210ENST00000416778 CCDC184Q52MB2 194 aa23.35■■□□□ 1.33
CPNE1-210ENST00000416778 COPS6Q7L5N1 327 aa23.35■■□□□ 1.33
CPNE1-210ENST00000416778 LAMB4A4D0S4 1761 aa23.35■■□□□ 1.33
CPNE1-210ENST00000416778 UBN2Q6ZU65 1347 aa23.34■■□□□ 1.33
CPNE1-210ENST00000416778 GLTPD2A6NH11 291 aa23.34■■□□□ 1.33
CPNE1-210ENST00000416778 ZNF853P0CG23 659 aa23.34■■□□□ 1.33
CPNE1-210ENST00000416778 LTBP3Q9NS15 1303 aa23.33■■□□□ 1.33
CPNE1-210ENST00000416778 ALDH1B1P30837 517 aa23.33■■□□□ 1.33
CPNE1-210ENST00000416778 CRY2Q49AN0 593 aa23.33■■□□□ 1.33
CPNE1-210ENST00000416778 SOGA3Q5TF21 947 aa23.33■■□□□ 1.33
CPNE1-210ENST00000416778 DDX21Q9NR30 783 aaKnown RBP eCLIP23.33■■□□□ 1.33
CPNE1-210ENST00000416778 SLX4Q8IY92 1834 aa23.32■■□□□ 1.32
CPNE1-210ENST00000416778 XAGE3Q8WTP9 111 aa23.32■■□□□ 1.32
CPNE1-210ENST00000416778 TAOK3Q9H2K8 898 aa23.32■■□□□ 1.32
CPNE1-210ENST00000416778 COL11A2P13942 1736 aaPredicted RBP23.3■■□□□ 1.32
CPNE1-210ENST00000416778 ZNF316A6NFI3 1004 aaPredicted RBP23.3■■□□□ 1.32
CPNE1-210ENST00000416778 NTSR2O95665 410 aa23.3■■□□□ 1.32
CPNE1-210ENST00000416778 HOXB7P09629 217 aa23.3■■□□□ 1.32
CPNE1-210ENST00000416778 HOXA10P31260 410 aaPredicted RBP23.3■■□□□ 1.32
CPNE1-210ENST00000416778 AIMP1Q12904 312 aaKnown RBP23.3■■□□□ 1.32
CPNE1-210ENST00000416778 PARP10Q53GL7 1025 aa23.3■■□□□ 1.32
CPNE1-210ENST00000416778 SLC10A5Q5PT55 438 aa23.3■■□□□ 1.32
CPNE1-210ENST00000416778 PPP1R42Q7Z4L9 355 aa23.3■■□□□ 1.32
CPNE1-210ENST00000416778 RBM46Q8TBY0 533 aaKnown RBP23.3■■□□□ 1.32
CPNE1-210ENST00000416778 MBIPQ9NS73 344 aa23.3■■□□□ 1.32
CPNE1-210ENST00000416778 OLFM4Q6UX06 510 aa23.29■■□□□ 1.32
CPNE1-210ENST00000416778 NUP98P52948 1817 aa23.29■■□□□ 1.32
CPNE1-210ENST00000416778 ABCC12Q96J65 1359 aa23.28■■□□□ 1.32
CPNE1-210ENST00000416778 POTECB2RU33 542 aa23.28■■□□□ 1.32
CPNE1-210ENST00000416778 VEGFAP15692 232 aaPredicted RBP23.28■■□□□ 1.32
CPNE1-210ENST00000416778 CCDC93Q567U6 631 aa23.28■■□□□ 1.32
CPNE1-210ENST00000416778 DUSP27Q5VZP5 1158 aa23.28■■□□□ 1.32
CPNE1-210ENST00000416778 DPY19L2Q6NUT2 758 aa23.28■■□□□ 1.32
CPNE1-210ENST00000416778 C16orf71Q8IYS4 520 aaPredicted RBP23.28■■□□□ 1.32
CPNE1-210ENST00000416778 CHPF2Q9P2E5 772 aa23.28■■□□□ 1.32
CPNE1-210ENST00000416778 IBTKQ9P2D0 1353 aaPredicted RBP23.27■■□□□ 1.32
CPNE1-210ENST00000416778 TCIRG1Q13488 830 aa23.27■■□□□ 1.32
CPNE1-210ENST00000416778 HDGFL1Q5TGJ6 251 aa23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms