RNA–Protein interactions for RNA: ENST00000416581.1

LINC01398-201, Transcript of long intergenic non-protein coding RNA 1398, humanhuman

TSL 1 (best)

Gene LINC01398, Length 1,129 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01398-201ENST00000416581 ZNF622Q969S3 477 aaKnown RBP eCLIP17.75■□□□□ 0.43
LINC01398-201ENST00000416581 FER1L6Q2WGJ9 1857 aa17.75■□□□□ 0.43
LINC01398-201ENST00000416581 CCDC88AQ3V6T2 1871 aa17.75■□□□□ 0.43
LINC01398-201ENST00000416581 RRAGCQ9HB90 399 aa17.74■□□□□ 0.43
LINC01398-201ENST00000416581 NFKBIEO00221 500 aa17.73■□□□□ 0.43
LINC01398-201ENST00000416581 MASTLQ96GX5 879 aa17.73■□□□□ 0.43
LINC01398-201ENST00000416581 TAF7Q15545 349 aaPredicted RBP17.72■□□□□ 0.43
LINC01398-201ENST00000416581 TAOK3Q9H2K8 898 aa17.72■□□□□ 0.43
LINC01398-201ENST00000416581 ZEB1P37275 1124 aaPredicted RBP17.71■□□□□ 0.43
LINC01398-201ENST00000416581 TPTE2Q6XPS3 522 aa17.71■□□□□ 0.43
LINC01398-201ENST00000416581 NBPF5PQ86XG9 351 aaPredicted RBP17.71■□□□□ 0.43
LINC01398-201ENST00000416581 USP16Q9Y5T5 823 aa17.71■□□□□ 0.43
LINC01398-201ENST00000416581 SRGNP10124 158 aa17.7■□□□□ 0.42
LINC01398-201ENST00000416581 ERFEQ4G0M1 354 aa17.7■□□□□ 0.42
LINC01398-201ENST00000416581 MCM10Q7L590 875 aa17.7■□□□□ 0.42
LINC01398-201ENST00000416581 DNAJC5GQ8N7S2 189 aa17.7■□□□□ 0.42
LINC01398-201ENST00000416581 KLRG1Q96E93 195 aa17.7■□□□□ 0.42
LINC01398-201ENST00000416581 CACNA1SQ13698 1873 aa17.69■□□□□ 0.42
LINC01398-201ENST00000416581 KCNQ3O43525 872 aa17.69■□□□□ 0.42
LINC01398-201ENST00000416581 C21orf2O43822 256 aa17.69■□□□□ 0.42
LINC01398-201ENST00000416581 KDM3BQ7LBC6 1761 aa17.68■□□□□ 0.42
LINC01398-201ENST00000416581 NPR1P16066 1061 aa17.68■□□□□ 0.42
LINC01398-201ENST00000416581 PRPF40BQ6NWY9 871 aaKnown RBP17.68■□□□□ 0.42
LINC01398-201ENST00000416581 MAPK8IP3Q9UPT6 1336 aa17.68■□□□□ 0.42
LINC01398-201ENST00000416581 DLG5Q8TDM6 1919 aa17.67■□□□□ 0.42
LINC01398-201ENST00000416581 CCDC93Q567U6 631 aa17.67■□□□□ 0.42
LINC01398-201ENST00000416581 JMYQ8N9B5 988 aa17.67■□□□□ 0.42
LINC01398-201ENST00000416581 NYXQ9GZU5 481 aa17.67■□□□□ 0.42
LINC01398-201ENST00000416581 NIP7Q9Y221 180 aaKnown RBP eCLIP17.67■□□□□ 0.42
LINC01398-201ENST00000416581 ERBB4Q15303 1308 aa17.66■□□□□ 0.42
LINC01398-201ENST00000416581 SLX4Q8IY92 1834 aa17.65■□□□□ 0.42
LINC01398-201ENST00000416581 KLRG2A4D1S0 409 aaPredicted RBP17.65■□□□□ 0.42
LINC01398-201ENST00000416581 IQCA1LA6NCM1 817 aa17.65■□□□□ 0.42
LINC01398-201ENST00000416581 ERVV-1B6SEH8 477 aa17.65■□□□□ 0.42
LINC01398-201ENST00000416581 GTF2E1P29083 439 aaPredicted RBP17.65■□□□□ 0.42
LINC01398-201ENST00000416581 IBTKQ9P2D0 1353 aaPredicted RBP17.65■□□□□ 0.42
LINC01398-201ENST00000416581 ALDH1B1P30837 517 aa17.64■□□□□ 0.41
LINC01398-201ENST00000416581 PRELPP51888 382 aa17.64■□□□□ 0.41
LINC01398-201ENST00000416581 DCTN1Q14203 1278 aa17.64■□□□□ 0.41
LINC01398-201ENST00000416581 NFE2L2Q16236 605 aa17.64■□□□□ 0.41
LINC01398-201ENST00000416581 KIF6Q6ZMV9 814 aa17.64■□□□□ 0.41
LINC01398-201ENST00000416581 RTKN2Q8IZC4 609 aa17.64■□□□□ 0.41
LINC01398-201ENST00000416581 RIC1Q4ADV7 1423 aa17.64■□□□□ 0.41
LINC01398-201ENST00000416581 SCN4AP35499 1836 aa17.63■□□□□ 0.41
LINC01398-201ENST00000416581 GRIPAP1Q4V328 841 aa17.63■□□□□ 0.41
LINC01398-201ENST00000416581 CCDC24Q8N4L8 307 aa17.63■□□□□ 0.41
LINC01398-201ENST00000416581 ZNF219Q9P2Y4 722 aaPredicted RBP17.63■□□□□ 0.41
LINC01398-201ENST00000416581 PRAMEF22A3QJZ6 481 aa17.62■□□□□ 0.41
LINC01398-201ENST00000416581 NBPF26B4DH59 902 aa17.62■□□□□ 0.41
LINC01398-201ENST00000416581 CC2D2BQ6DHV5 1058 aa17.62■□□□□ 0.41
LINC01398-201ENST00000416581 NBPF10Q6P3W6 841 aaKnown RBP17.62■□□□□ 0.41
LINC01398-201ENST00000416581 NBPF15Q8N660 670 aa17.62■□□□□ 0.41
LINC01398-201ENST00000416581 PIP4K2AP48426 406 aaPredicted RBP17.61■□□□□ 0.41
LINC01398-201ENST00000416581 FKBP4Q02790 459 aaKnown RBP eCLIP17.61■□□□□ 0.41
LINC01398-201ENST00000416581 LMOD3Q0VAK6 560 aa17.61■□□□□ 0.41
LINC01398-201ENST00000416581 BABAM1Q9NWV8 329 aa17.61■□□□□ 0.41
LINC01398-201ENST00000416581 MAP3K15Q6ZN16 1313 aa17.61■□□□□ 0.41
LINC01398-201ENST00000416581 CAPN15O75808 1086 aa17.6■□□□□ 0.41
LINC01398-201ENST00000416581 PLEKHF1Q96S99 279 aa17.6■□□□□ 0.41
LINC01398-201ENST00000416581 NUP98P52948 1817 aa17.6■□□□□ 0.41
LINC01398-201ENST00000416581 EIF4A1P60842 406 aaKnown RBP17.59■□□□□ 0.41
LINC01398-201ENST00000416581 RALBP1Q15311 655 aa17.59■□□□□ 0.41
LINC01398-201ENST00000416581 COL13A1Q5TAT6 717 aaPredicted RBP17.59■□□□□ 0.41
LINC01398-201ENST00000416581 CHADLQ6NUI6 762 aa17.59■□□□□ 0.41
LINC01398-201ENST00000416581 C7orf43Q8WVR3 580 aa17.59■□□□□ 0.41
LINC01398-201ENST00000416581 L3MBTL3Q96JM7 780 aaPredicted RBP17.59■□□□□ 0.41
LINC01398-201ENST00000416581 RNF123Q5XPI4 1314 aa17.57■□□□□ 0.4
LINC01398-201ENST00000416581 POTECB2RU33 542 aa17.57■□□□□ 0.4
LINC01398-201ENST00000416581 CRY2Q49AN0 593 aa17.57■□□□□ 0.4
LINC01398-201ENST00000416581 LDHDQ86WU2 507 aa17.57■□□□□ 0.4
LINC01398-201ENST00000416581 HLFQ16534 295 aa17.56■□□□□ 0.4
LINC01398-201ENST00000416581 PARP10Q53GL7 1025 aa17.56■□□□□ 0.4
LINC01398-201ENST00000416581 RPGRQ92834 1020 aaKnown RBP17.56■□□□□ 0.4
LINC01398-201ENST00000416581 PSMD1Q99460 953 aa17.56■□□□□ 0.4
LINC01398-201ENST00000416581 TMX4Q9H1E5 349 aaPredicted RBP17.56■□□□□ 0.4
LINC01398-201ENST00000416581 CREBZFQ9NS37 354 aa17.56■□□□□ 0.4
LINC01398-201ENST00000416581 DDNO94850 711 aaPredicted RBP17.55■□□□□ 0.4
LINC01398-201ENST00000416581 HTRA3P83110 453 aa17.55■□□□□ 0.4
LINC01398-201ENST00000416581 PPP1R42Q7Z4L9 355 aa17.55■□□□□ 0.4
LINC01398-201ENST00000416581 JDP2Q8WYK2 163 aa17.55■□□□□ 0.4
LINC01398-201ENST00000416581 MIS18AQ9NYP9 233 aa17.55■□□□□ 0.4
LINC01398-201ENST00000416581 TSPYL4Q9UJ04 414 aa17.55■□□□□ 0.4
LINC01398-201ENST00000416581 RRP7AQ9Y3A4 280 aaKnown RBP17.55■□□□□ 0.4
LINC01398-201ENST00000416581 FAM177BA6PVY3 158 aa17.54■□□□□ 0.4
LINC01398-201ENST00000416581 IARSP41252 1262 aaKnown RBP17.54■□□□□ 0.4
LINC01398-201ENST00000416581 GIGYF2Q6Y7W6 1299 aaKnown RBP17.54■□□□□ 0.4
LINC01398-201ENST00000416581 PNMA8AQ86V59 439 aaPredicted RBP17.54■□□□□ 0.4
LINC01398-201ENST00000416581 HOXA10P31260 410 aaPredicted RBP17.53■□□□□ 0.4
LINC01398-201ENST00000416581 HSP90AB3PQ58FF7 597 aa17.53■□□□□ 0.4
LINC01398-201ENST00000416581 NGEFQ8N5V2 710 aa17.53■□□□□ 0.4
LINC01398-201ENST00000416581 RBM17Q96I25 401 aaKnown RBP17.53■□□□□ 0.4
LINC01398-201ENST00000416581 HACL1Q9UJ83 578 aa17.53■□□□□ 0.4
LINC01398-201ENST00000416581 ABCC12Q96J65 1359 aa17.53■□□□□ 0.4
LINC01398-201ENST00000416581 MYL6BP14649 208 aa17.52■□□□□ 0.4
LINC01398-201ENST00000416581 GPC2Q8N158 579 aa17.52■□□□□ 0.4
LINC01398-201ENST00000416581 CRAMP1Q96RY5 1269 aa17.52■□□□□ 0.4
LINC01398-201ENST00000416581 TAF1DQ9H5J8 278 aaPredicted RBP17.52■□□□□ 0.4
LINC01398-201ENST00000416581 FZD9O00144 591 aa17.51■□□□□ 0.39
LINC01398-201ENST00000416581 EIF6P56537 245 aaKnown RBP17.51■□□□□ 0.39
LINC01398-201ENST00000416581 RIPK4P57078 832 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms