RNA–Protein interactions for RNA: ENST00000415825.2

TRAPPC13-203, Transcript of trafficking protein particle complex 13, humanhuman

TSL 1 (best)

Gene TRAPPC13, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-203ENST00000415825 MTFR1Q15390 333 aa7.49□□□□□ -1.21
TRAPPC13-203ENST00000415825 STRN4Q9NRL3 753 aa7.49□□□□□ -1.21
TRAPPC13-203ENST00000415825 PARP3Q9Y6F1 533 aa7.49□□□□□ -1.21
TRAPPC13-203ENST00000415825 ELNP15502 786 aa7.48□□□□□ -1.21
TRAPPC13-203ENST00000415825 WASHC4Q2M389 1173 aa7.48□□□□□ -1.21
TRAPPC13-203ENST00000415825 EML3Q32P44 896 aa7.48□□□□□ -1.21
TRAPPC13-203ENST00000415825 FOXD4L6Q3SYB3 417 aaPredicted RBP7.48□□□□□ -1.21
TRAPPC13-203ENST00000415825 FOXD4L3Q6VB84 417 aaPredicted RBP7.48□□□□□ -1.21
TRAPPC13-203ENST00000415825 TXNRD3Q86VQ6 643 aa7.48□□□□□ -1.21
TRAPPC13-203ENST00000415825 MICALL1Q8N3F8 863 aa7.48□□□□□ -1.21
TRAPPC13-203ENST00000415825 TNFRSF25Q93038 417 aa7.48□□□□□ -1.21
TRAPPC13-203ENST00000415825 ANKIB1Q9P2G1 1089 aa7.48□□□□□ -1.21
TRAPPC13-203ENST00000415825 USP21Q9UK80 565 aa7.48□□□□□ -1.21
TRAPPC13-203ENST00000415825 TBC1D2BQ9UPU7 963 aa7.48□□□□□ -1.21
TRAPPC13-203ENST00000415825 GPR37L1O60883 481 aa7.47□□□□□ -1.21
TRAPPC13-203ENST00000415825 ALBP02768 609 aa7.47□□□□□ -1.21
TRAPPC13-203ENST00000415825 SOX11P35716 441 aa7.47□□□□□ -1.21
TRAPPC13-203ENST00000415825 TBC1D8BQ0IIM8 1120 aa7.47□□□□□ -1.21
TRAPPC13-203ENST00000415825 SPEM2Q0P670 501 aa7.47□□□□□ -1.21
TRAPPC13-203ENST00000415825 TP53INP1Q96A56 240 aa7.47□□□□□ -1.21
TRAPPC13-203ENST00000415825 RHPN1Q8TCX5 695 aa7.46□□□□□ -1.22
TRAPPC13-203ENST00000415825 L3MBTL2Q969R5 705 aa7.46□□□□□ -1.22
TRAPPC13-203ENST00000415825 CEP63Q96MT8 703 aa7.46□□□□□ -1.22
TRAPPC13-203ENST00000415825 CHIC2Q9UKJ5 165 aa7.46□□□□□ -1.22
TRAPPC13-203ENST00000415825 NOD1Q9Y239 953 aa7.46□□□□□ -1.22
TRAPPC13-203ENST00000415825 VAC14Q08AM6 782 aa7.45□□□□□ -1.22
TRAPPC13-203ENST00000415825 IQSEC3Q9UPP2 1182 aaPredicted RBP7.45□□□□□ -1.22
TRAPPC13-203ENST00000415825 TMEM229AB2RXF0 380 aa7.44□□□□□ -1.22
TRAPPC13-203ENST00000415825 NOS2P35228 1153 aa7.44□□□□□ -1.22
TRAPPC13-203ENST00000415825 TXLNAP40222 546 aa7.44□□□□□ -1.22
TRAPPC13-203ENST00000415825 ADGRE1Q14246 886 aa7.44□□□□□ -1.22
TRAPPC13-203ENST00000415825 MBTPS1Q14703 1052 aa7.44□□□□□ -1.22
TRAPPC13-203ENST00000415825 TEAD4Q15561 434 aa7.44□□□□□ -1.22
TRAPPC13-203ENST00000415825 UBE2OQ9C0C9 1292 aaKnown RBP7.44□□□□□ -1.22
TRAPPC13-203ENST00000415825 GOLGA2P5Q9HBQ8 144 aa7.44□□□□□ -1.22
TRAPPC13-203ENST00000415825 SERTM1A2A2V5 107 aa7.43□□□□□ -1.22
TRAPPC13-203ENST00000415825 PAX4O43316 350 aa7.43□□□□□ -1.22
TRAPPC13-203ENST00000415825 HYAL3O43820 417 aaPredicted RBP7.43□□□□□ -1.22
TRAPPC13-203ENST00000415825 LZTS3O60299 673 aaPredicted RBP7.43□□□□□ -1.22
TRAPPC13-203ENST00000415825 NID1P14543 1247 aa7.43□□□□□ -1.22
TRAPPC13-203ENST00000415825 LENG1Q96BZ8 264 aaPredicted RBP7.43□□□□□ -1.22
TRAPPC13-203ENST00000415825 IGFLR1Q9H665 355 aa7.43□□□□□ -1.22
TRAPPC13-203ENST00000415825 JPH1Q9HDC5 661 aaPredicted RBP7.43□□□□□ -1.22
TRAPPC13-203ENST00000415825 BRD7Q9NPI1 651 aa7.43□□□□□ -1.22
TRAPPC13-203ENST00000415825 SCHIP1Q9P0W5 487 aaPredicted RBP7.43□□□□□ -1.22
TRAPPC13-203ENST00000415825 A0A0A0MRY4 1105 aa7.42□□□□□ -1.22
TRAPPC13-203ENST00000415825 ABL2P42684 1182 aa7.42□□□□□ -1.22
TRAPPC13-203ENST00000415825 SFSWAPQ12872 951 aaKnown RBP7.42□□□□□ -1.22
TRAPPC13-203ENST00000415825 C8orf86Q6ZUL3 223 aa7.42□□□□□ -1.22
TRAPPC13-203ENST00000415825 BHMTQ93088 406 aa7.42□□□□□ -1.22
TRAPPC13-203ENST00000415825 SLC30A3Q99726 388 aa7.42□□□□□ -1.22
TRAPPC13-203ENST00000415825 HCN2Q9UL51 889 aa7.42□□□□□ -1.22
TRAPPC13-203ENST00000415825 KCNH4Q9UQ05 1017 aa7.42□□□□□ -1.22
TRAPPC13-203ENST00000415825 GTF2IP78347 998 aa7.41□□□□□ -1.22
TRAPPC13-203ENST00000415825 HIF1AQ16665 826 aa7.41□□□□□ -1.22
TRAPPC13-203ENST00000415825 PNMA5Q96PV4 448 aa7.41□□□□□ -1.22
TRAPPC13-203ENST00000415825 MDFIQ99750 246 aa7.41□□□□□ -1.22
TRAPPC13-203ENST00000415825 STARD13Q9Y3M8 1113 aa7.41□□□□□ -1.22
TRAPPC13-203ENST00000415825 EML1O00423 815 aa7.4□□□□□ -1.22
TRAPPC13-203ENST00000415825 TXKP42681 527 aa7.4□□□□□ -1.22
TRAPPC13-203ENST00000415825 RAB44Q7Z6P3 723 aaPredicted RBP7.4□□□□□ -1.22
TRAPPC13-203ENST00000415825 SLC9A9Q8IVB4 645 aa7.4□□□□□ -1.22
TRAPPC13-203ENST00000415825 WWC1Q8IX03 1113 aa7.4□□□□□ -1.22
TRAPPC13-203ENST00000415825 ZNF295-AS1Q8N0V1 137 aa7.4□□□□□ -1.22
TRAPPC13-203ENST00000415825 USP3Q9Y6I4 520 aa7.4□□□□□ -1.22
TRAPPC13-203ENST00000415825 SFI1A8K8P3 1242 aa7.39□□□□□ -1.23
TRAPPC13-203ENST00000415825 SKIP12755 728 aa7.39□□□□□ -1.23
TRAPPC13-203ENST00000415825 SELPP16109 830 aa7.39□□□□□ -1.23
TRAPPC13-203ENST00000415825 EFCC1Q9HA90 598 aa7.39□□□□□ -1.23
TRAPPC13-203ENST00000415825 RBM19Q9Y4C8 960 aaKnown RBP7.39□□□□□ -1.23
TRAPPC13-203ENST00000415825 RGS9O75916 674 aaPredicted RBP7.38□□□□□ -1.23
TRAPPC13-203ENST00000415825 PSMA6P60900 246 aaKnown RBP7.38□□□□□ -1.23
TRAPPC13-203ENST00000415825 COL9A3Q14050 684 aaPredicted RBP7.38□□□□□ -1.23
TRAPPC13-203ENST00000415825 PCSK7Q16549 785 aa7.38□□□□□ -1.23
TRAPPC13-203ENST00000415825 TRIM50Q86XT4 487 aa7.38□□□□□ -1.23
TRAPPC13-203ENST00000415825 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.38□□□□□ -1.23
TRAPPC13-203ENST00000415825 NUDT8Q8WV74 236 aa7.38□□□□□ -1.23
TRAPPC13-203ENST00000415825 KRTAP4-12Q9BQ66 201 aa7.38□□□□□ -1.23
TRAPPC13-203ENST00000415825 PCMTD2Q9NV79 361 aa7.38□□□□□ -1.23
TRAPPC13-203ENST00000415825 ZNF358Q9NW07 568 aa7.38□□□□□ -1.23
TRAPPC13-203ENST00000415825 COBLO75128 1261 aa7.37□□□□□ -1.23
TRAPPC13-203ENST00000415825 IRF5Q13568 498 aa7.37□□□□□ -1.23
TRAPPC13-203ENST00000415825 C1orf53Q5VUE5 145 aa7.37□□□□□ -1.23
TRAPPC13-203ENST00000415825 C20orf204Q6ZNR8 217 aa7.37□□□□□ -1.23
TRAPPC13-203ENST00000415825 ZDHHC1Q8WTX9 485 aa7.37□□□□□ -1.23
TRAPPC13-203ENST00000415825 RNF112Q9ULX5 631 aa7.37□□□□□ -1.23
TRAPPC13-203ENST00000415825 PCDHGA11Q9Y5H2 935 aa7.37□□□□□ -1.23
TRAPPC13-203ENST00000415825 MCTP1Q6DN14 999 aa7.36□□□□□ -1.23
TRAPPC13-203ENST00000415825 SHISA2Q6UWI4 295 aa7.36□□□□□ -1.23
TRAPPC13-203ENST00000415825 GDPD2Q9HCC8 539 aa7.36□□□□□ -1.23
TRAPPC13-203ENST00000415825 SLC6A14Q9UN76 642 aa7.36□□□□□ -1.23
TRAPPC13-203ENST00000415825 ATP1A2P50993 1020 aa7.35□□□□□ -1.23
TRAPPC13-203ENST00000415825 KCNQ4P56696 695 aa7.35□□□□□ -1.23
TRAPPC13-203ENST00000415825 TBCELQ5QJ74 424 aa7.35□□□□□ -1.23
TRAPPC13-203ENST00000415825 PSAPL1Q6NUJ1 521 aa7.35□□□□□ -1.23
TRAPPC13-203ENST00000415825 DMRTC2Q8IXT2 367 aaPredicted RBP7.35□□□□□ -1.23
TRAPPC13-203ENST00000415825 FMR1NBQ8N0W7 255 aaPredicted RBP7.35□□□□□ -1.23
TRAPPC13-203ENST00000415825 SLC51AQ86UW1 340 aa7.34□□□□□ -1.23
TRAPPC13-203ENST00000415825 TNS4Q8IZW8 715 aa7.34□□□□□ -1.23
TRAPPC13-203ENST00000415825 DTWD1Q8N5C7 304 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms