RNA–Protein interactions for RNA: ENST00000415380.6

SCARB1-203, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2 BASIC

Gene SCARB1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-203ENST00000415380 USP25Q9UHP3 1055 aa21.63■■□□□ 1.05
SCARB1-203ENST00000415380 ADCY9O60503 1353 aa21.62■■□□□ 1.05
SCARB1-203ENST00000415380 LETM1O95202 739 aaPredicted RBP21.62■■□□□ 1.05
SCARB1-203ENST00000415380 PTH1RQ03431 593 aa21.62■■□□□ 1.05
SCARB1-203ENST00000415380 C14orf37Q86TY3 774 aa21.62■■□□□ 1.05
SCARB1-203ENST00000415380 FAM13BQ9NYF5 915 aa21.62■■□□□ 1.05
SCARB1-203ENST00000415380 KDM3BQ7LBC6 1761 aa21.61■■□□□ 1.05
SCARB1-203ENST00000415380 FIBPO43427 364 aa21.61■■□□□ 1.05
SCARB1-203ENST00000415380 SASS6Q6UVJ0 657 aa21.61■■□□□ 1.05
SCARB1-203ENST00000415380 NBPF6Q5VWK0 638 aa21.61■■□□□ 1.05
SCARB1-203ENST00000415380 CCDC83Q8IWF9 413 aa21.61■■□□□ 1.05
SCARB1-203ENST00000415380 RUFY2Q8WXA3 655 aa21.61■■□□□ 1.05
SCARB1-203ENST00000415380 NBPF4Q96M43 638 aa21.61■■□□□ 1.05
SCARB1-203ENST00000415380 HCLS1P14317 486 aaPredicted RBP21.6■■□□□ 1.05
SCARB1-203ENST00000415380 ADCK5Q3MIX3 580 aa21.6■■□□□ 1.05
SCARB1-203ENST00000415380 CLASRPQ8N2M8 674 aaKnown RBP21.6■■□□□ 1.05
SCARB1-203ENST00000415380 MPNDQ8N594 471 aa21.6■■□□□ 1.05
SCARB1-203ENST00000415380 ATP6V1DQ9Y5K8 247 aa21.6■■□□□ 1.05
SCARB1-203ENST00000415380 GJB2P29033 226 aa21.6■■□□□ 1.05
SCARB1-203ENST00000415380 MTX1Q13505 466 aa21.6■■□□□ 1.05
SCARB1-203ENST00000415380 JAKMIP1Q96N16 626 aaKnown RBP21.6■■□□□ 1.05
SCARB1-203ENST00000415380 PDRG1Q9NUG6 133 aa21.6■■□□□ 1.05
SCARB1-203ENST00000415380 DTNBO60941 627 aa21.59■■□□□ 1.05
SCARB1-203ENST00000415380 KCNA6P17658 529 aa21.59■■□□□ 1.05
SCARB1-203ENST00000415380 VPS53Q5VIR6 699 aa21.59■■□□□ 1.05
SCARB1-203ENST00000415380 PRPF40BQ6NWY9 871 aaKnown RBP21.59■■□□□ 1.05
SCARB1-203ENST00000415380 PLPPR3Q6T4P5 718 aa21.59■■□□□ 1.05
SCARB1-203ENST00000415380 IP6K1Q92551 441 aa21.59■■□□□ 1.05
SCARB1-203ENST00000415380 ADCY5O95622 1261 aa21.59■■□□□ 1.05
SCARB1-203ENST00000415380 CHMP4AQ9BY43 222 aa21.59■■□□□ 1.05
SCARB1-203ENST00000415380 ECHDC1Q9NTX5 307 aa21.59■■□□□ 1.05
SCARB1-203ENST00000415380 LTN1O94822 1766 aa21.59■■□□□ 1.05
SCARB1-203ENST00000415380 MTMR6Q9Y217 621 aa21.58■■□□□ 1.05
SCARB1-203ENST00000415380 BTBD11A6QL63 1104 aa21.58■■□□□ 1.05
SCARB1-203ENST00000415380 ZNF830Q96NB3 372 aaPredicted RBP21.58■■□□□ 1.05
SCARB1-203ENST00000415380 ZSWIM6Q9HCJ5 1215 aa21.58■■□□□ 1.05
SCARB1-203ENST00000415380 DYNC1I1O14576 645 aa21.57■■□□□ 1.04
SCARB1-203ENST00000415380 DNM1Q05193 864 aaKnown RBP21.57■■□□□ 1.04
SCARB1-203ENST00000415380 TEFQ10587 303 aa21.57■■□□□ 1.04
SCARB1-203ENST00000415380 KCNB2Q92953 911 aa21.57■■□□□ 1.04
SCARB1-203ENST00000415380 TM6SF1Q9BZW5 370 aa21.57■■□□□ 1.04
SCARB1-203ENST00000415380 PA2G4Q9UQ80 394 aaKnown RBP21.57■■□□□ 1.04
SCARB1-203ENST00000415380 ZSCAN31Q96LW9 406 aaPredicted RBP21.57■■□□□ 1.04
SCARB1-203ENST00000415380 CYP46A1Q9Y6A2 500 aa21.57■■□□□ 1.04
SCARB1-203ENST00000415380 FUCA2Q9BTY2 467 aa21.56■■□□□ 1.04
SCARB1-203ENST00000415380 IFIT2P09913 472 aaKnown RBP21.56■■□□□ 1.04
SCARB1-203ENST00000415380 ST3GAL1Q11201 340 aa21.56■■□□□ 1.04
SCARB1-203ENST00000415380 MAP7D2Q96T17 732 aa21.56■■□□□ 1.04
SCARB1-203ENST00000415380 SH2B1Q9NRF2 756 aaPredicted RBP21.56■■□□□ 1.04
SCARB1-203ENST00000415380 C9orf78Q9NZ63 289 aaPredicted RBP21.56■■□□□ 1.04
SCARB1-203ENST00000415380 MAP3K2Q9Y2U5 619 aa21.56■■□□□ 1.04
SCARB1-203ENST00000415380 NECTIN1Q15223 517 aa21.55■■□□□ 1.04
SCARB1-203ENST00000415380 GIMAP6Q6P9H5 292 aa21.55■■□□□ 1.04
SCARB1-203ENST00000415380 GPATCH3Q96I76 525 aa21.55■■□□□ 1.04
SCARB1-203ENST00000415380 ZMYND15Q9H091 742 aa21.55■■□□□ 1.04
SCARB1-203ENST00000415380 DBF4Q9UBU7 674 aaPredicted RBP21.55■■□□□ 1.04
SCARB1-203ENST00000415380 MPRIPQ6WCQ1 1025 aa21.55■■□□□ 1.04
SCARB1-203ENST00000415380 PIBF1Q8WXW3 757 aa21.55■■□□□ 1.04
SCARB1-203ENST00000415380 KDM4AO75164 1064 aa21.54■■□□□ 1.04
SCARB1-203ENST00000415380 AKAP4Q5JQC9 854 aa21.54■■□□□ 1.04
SCARB1-203ENST00000415380 ZNF530Q6P9A1 599 aaPredicted RBP21.54■■□□□ 1.04
SCARB1-203ENST00000415380 THEMISQ8N1K5 641 aaPredicted RBP21.54■■□□□ 1.04
SCARB1-203ENST00000415380 DDX54Q8TDD1 881 aaKnown RBP21.54■■□□□ 1.04
SCARB1-203ENST00000415380 EVI5LQ96CN4 794 aa21.54■■□□□ 1.04
SCARB1-203ENST00000415380 CCDC171Q6TFL3 1326 aa21.54■■□□□ 1.04
SCARB1-203ENST00000415380 ME3Q16798 604 aa21.54■■□□□ 1.04
SCARB1-203ENST00000415380 ERC1Q8IUD2 1116 aa21.54■■□□□ 1.04
SCARB1-203ENST00000415380 TTC12Q9H892 705 aaPredicted RBP21.54■■□□□ 1.04
SCARB1-203ENST00000415380 ALDH1L1O75891 902 aa21.53■■□□□ 1.04
SCARB1-203ENST00000415380 ZBTB7CA1YPR0 619 aa21.53■■□□□ 1.04
SCARB1-203ENST00000415380 AACSQ86V21 672 aa21.53■■□□□ 1.04
SCARB1-203ENST00000415380 NFAT5O94916 1531 aa21.53■■□□□ 1.04
SCARB1-203ENST00000415380 VPS37CA5D8V6 355 aaPredicted RBP21.52■■□□□ 1.04
SCARB1-203ENST00000415380 PROSER3Q2NL68 480 aa21.52■■□□□ 1.04
SCARB1-203ENST00000415380 CWF19L2Q2TBE0 894 aaKnown RBP21.52■■□□□ 1.04
SCARB1-203ENST00000415380 NECAB1Q8N987 351 aa21.52■■□□□ 1.04
SCARB1-203ENST00000415380 PHF8Q9UPP1 1060 aa21.52■■□□□ 1.04
SCARB1-203ENST00000415380 RBM8AQ9Y5S9 174 aaKnown RBP21.52■■□□□ 1.04
SCARB1-203ENST00000415380 LMO7Q8WWI1 1683 aa21.52■■□□□ 1.04
SCARB1-203ENST00000415380 DNTTIP2Q5QJE6 756 aaKnown RBP21.52■■□□□ 1.04
SCARB1-203ENST00000415380 LRRC59Q96AG4 307 aaKnown RBP21.52■■□□□ 1.04
SCARB1-203ENST00000415380 ZKSCAN1P17029 563 aaPredicted RBP21.51■■□□□ 1.03
SCARB1-203ENST00000415380 NOLC1Q14978 699 aaKnown RBP eCLIP21.51■■□□□ 1.035e-9■■■■■ 28.5
SCARB1-203ENST00000415380 CREB3L3Q68CJ9 461 aa21.51■■□□□ 1.03
SCARB1-203ENST00000415380 KSR2Q6VAB6 950 aa21.51■■□□□ 1.03
SCARB1-203ENST00000415380 KLHL34Q8N239 644 aa21.51■■□□□ 1.03
SCARB1-203ENST00000415380 FAM227BQ96M60 508 aa21.51■■□□□ 1.03
SCARB1-203ENST00000415380 TPCN1Q9ULQ1 816 aa21.51■■□□□ 1.03
SCARB1-203ENST00000415380 PLEKHO1Q53GL0 409 aaPredicted RBP21.5■■□□□ 1.03
SCARB1-203ENST00000415380 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.5■■□□□ 1.03
SCARB1-203ENST00000415380 RGPD2P0DJD1 1756 aa21.5■■□□□ 1.03
SCARB1-203ENST00000415380 NMIQ13287 307 aaPredicted RBP21.49■■□□□ 1.03
SCARB1-203ENST00000415380 MAP4K1Q92918 833 aa21.49■■□□□ 1.03
SCARB1-203ENST00000415380 SETD1BQ9UPS6 1966 aaKnown RBP21.49■■□□□ 1.03
SCARB1-203ENST00000415380 RNMTO43148 476 aaKnown RBP21.49■■□□□ 1.03
SCARB1-203ENST00000415380 AP5Z1O43299 807 aa21.49■■□□□ 1.03
SCARB1-203ENST00000415380 GIGYF1O75420 1035 aaPredicted RBP21.49■■□□□ 1.03
SCARB1-203ENST00000415380 KCNJ4P48050 445 aa21.49■■□□□ 1.03
SCARB1-203ENST00000415380 C17orf53Q8N3J3 647 aaPredicted RBP21.49■■□□□ 1.03
SCARB1-203ENST00000415380 SASH1O94885 1247 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms