RNA–Protein interactions for RNA: ENST00000415281.1

NCKIPSD-203, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-203ENST00000415281 THUMPD2Q9BTF0 503 aaKnown RBP16.56■□□□□ 0.24
NCKIPSD-203ENST00000415281 PCNTO95613 3336 aa16.55■□□□□ 0.24
NCKIPSD-203ENST00000415281 KLRG2A4D1S0 409 aaPredicted RBP16.55■□□□□ 0.24
NCKIPSD-203ENST00000415281 C21orf2O43822 256 aa16.55■□□□□ 0.24
NCKIPSD-203ENST00000415281 LMNB1P20700 586 aa16.55■□□□□ 0.24
NCKIPSD-203ENST00000415281 PDE6BP35913 854 aa16.55■□□□□ 0.24
NCKIPSD-203ENST00000415281 CLEC4GQ6UXB4 293 aa16.55■□□□□ 0.24
NCKIPSD-203ENST00000415281 WDR90Q96KV7 1748 aa16.55■□□□□ 0.24
NCKIPSD-203ENST00000415281 NUP98P52948 1817 aa16.54■□□□□ 0.24
NCKIPSD-203ENST00000415281 EIF4A1P60842 406 aaKnown RBP16.54■□□□□ 0.24
NCKIPSD-203ENST00000415281 HTRA3P83110 453 aa16.54■□□□□ 0.24
NCKIPSD-203ENST00000415281 ZNF622Q969S3 477 aaKnown RBP eCLIP16.54■□□□□ 0.242e-7■■■■■ 28.3
NCKIPSD-203ENST00000415281 ZNF219Q9P2Y4 722 aaPredicted RBP16.54■□□□□ 0.24
NCKIPSD-203ENST00000415281 KDM2BQ8NHM5 1336 aa16.53■□□□□ 0.24
NCKIPSD-203ENST00000415281 GLTPD2A6NH11 291 aa16.53■□□□□ 0.24
NCKIPSD-203ENST00000415281 NFE2L2Q16236 605 aa16.53■□□□□ 0.24
NCKIPSD-203ENST00000415281 ZC3H4Q9UPT8 1303 aaKnown RBP16.52■□□□□ 0.24
NCKIPSD-203ENST00000415281 APLP1P51693 650 aa16.52■□□□□ 0.24
NCKIPSD-203ENST00000415281 STYK1Q6J9G0 422 aa16.52■□□□□ 0.24
NCKIPSD-203ENST00000415281 CNBD1Q8NA66 436 aa16.52■□□□□ 0.24
NCKIPSD-203ENST00000415281 PDZRN3Q9UPQ7 1066 aa16.52■□□□□ 0.24
NCKIPSD-203ENST00000415281 RGL2O15211 777 aa16.51■□□□□ 0.23
NCKIPSD-203ENST00000415281 TTLL7Q6ZT98 887 aa16.51■□□□□ 0.23
NCKIPSD-203ENST00000415281 LRP10Q7Z4F1 713 aa16.51■□□□□ 0.23
NCKIPSD-203ENST00000415281 FSTL1Q12841 308 aa16.5■□□□□ 0.23
NCKIPSD-203ENST00000415281 PRPF40BQ6NWY9 871 aaKnown RBP16.5■□□□□ 0.23
NCKIPSD-203ENST00000415281 OLFM4Q6UX06 510 aa16.5■□□□□ 0.23
NCKIPSD-203ENST00000415281 MASTLQ96GX5 879 aa16.5■□□□□ 0.23
NCKIPSD-203ENST00000415281 LTBP3Q9NS15 1303 aa16.49■□□□□ 0.23
NCKIPSD-203ENST00000415281 SNED1Q8TER0 1413 aa16.49■□□□□ 0.23
NCKIPSD-203ENST00000415281 NIP7Q9Y221 180 aaKnown RBP eCLIP16.49■□□□□ 0.23
NCKIPSD-203ENST00000415281 PDIA6Q15084 440 aa16.48■□□□□ 0.23
NCKIPSD-203ENST00000415281 SLC51AQ86UW1 340 aa16.48■□□□□ 0.23
NCKIPSD-203ENST00000415281 NBPF5PQ86XG9 351 aaPredicted RBP16.48■□□□□ 0.23
NCKIPSD-203ENST00000415281 CNKSR1Q969H4 720 aa16.48■□□□□ 0.23
NCKIPSD-203ENST00000415281 FAM177BA6PVY3 158 aa16.47■□□□□ 0.23
NCKIPSD-203ENST00000415281 ST5P78524 1137 aa16.47■□□□□ 0.23
NCKIPSD-203ENST00000415281 PNISRQ8TF01 805 aaKnown RBP16.47■□□□□ 0.23
NCKIPSD-203ENST00000415281 VEGFAP15692 232 aaPredicted RBP16.46■□□□□ 0.23
NCKIPSD-203ENST00000415281 TPTE2Q6XPS3 522 aa16.46■□□□□ 0.23
NCKIPSD-203ENST00000415281 NGEFQ8N5V2 710 aa16.46■□□□□ 0.23
NCKIPSD-203ENST00000415281 RRP7AQ9Y3A4 280 aaKnown RBP16.46■□□□□ 0.23
NCKIPSD-203ENST00000415281 ABCC12Q96J65 1359 aa16.46■□□□□ 0.23
NCKIPSD-203ENST00000415281 UBN2Q6ZU65 1347 aa16.45■□□□□ 0.22
NCKIPSD-203ENST00000415281 ERVV-1B6SEH8 477 aa16.45■□□□□ 0.22
NCKIPSD-203ENST00000415281 NPR1P16066 1061 aa16.45■□□□□ 0.22
NCKIPSD-203ENST00000415281 DDX10Q13206 875 aaKnown RBP16.45■□□□□ 0.22
NCKIPSD-203ENST00000415281 ERFEQ4G0M1 354 aa16.45■□□□□ 0.22
NCKIPSD-203ENST00000415281 NPM2Q86SE8 214 aaKnown RBP16.45■□□□□ 0.22
NCKIPSD-203ENST00000415281 ZNF652Q9Y2D9 606 aa16.45■□□□□ 0.22
NCKIPSD-203ENST00000415281 MAP3K15Q6ZN16 1313 aa16.45■□□□□ 0.22
NCKIPSD-203ENST00000415281 DDNO94850 711 aaPredicted RBP16.44■□□□□ 0.22
NCKIPSD-203ENST00000415281 POTEIP0CG38 1075 aa16.44■□□□□ 0.22
NCKIPSD-203ENST00000415281 POTEJP0CG39 1038 aa16.44■□□□□ 0.22
NCKIPSD-203ENST00000415281 MYL6BP14649 208 aa16.44■□□□□ 0.22
NCKIPSD-203ENST00000415281 TMPOP42166 694 aaKnown RBP16.44■□□□□ 0.22
NCKIPSD-203ENST00000415281 RALBP1Q15311 655 aa16.44■□□□□ 0.22
NCKIPSD-203ENST00000415281 CRY2Q49AN0 593 aa16.44■□□□□ 0.22
NCKIPSD-203ENST00000415281 IFFO2Q5TF58 517 aa16.44■□□□□ 0.22
NCKIPSD-203ENST00000415281 NUTM1Q86Y26 1132 aa16.44■□□□□ 0.22
NCKIPSD-203ENST00000415281 C16orf71Q8IYS4 520 aaPredicted RBP16.44■□□□□ 0.22
NCKIPSD-203ENST00000415281 ZNF34Q8IZ26 560 aa16.44■□□□□ 0.22
NCKIPSD-203ENST00000415281 TAOK3Q9H2K8 898 aa16.44■□□□□ 0.22
NCKIPSD-203ENST00000415281 COL4A5P29400 1685 aa16.43■□□□□ 0.22
NCKIPSD-203ENST00000415281 RIPK4P57078 832 aa16.43■□□□□ 0.22
NCKIPSD-203ENST00000415281 PROSER3Q2NL68 480 aa16.43■□□□□ 0.22
NCKIPSD-203ENST00000415281 SUSD4Q5VX71 490 aa16.43■□□□□ 0.22
NCKIPSD-203ENST00000415281 C3orf67Q6ZVT6 689 aa16.43■□□□□ 0.22
NCKIPSD-203ENST00000415281 JMYQ8N9B5 988 aa16.43■□□□□ 0.22
NCKIPSD-203ENST00000415281 SMC1BQ8NDV3 1235 aa16.43■□□□□ 0.22
NCKIPSD-203ENST00000415281 KLRG1Q96E93 195 aa16.42■□□□□ 0.22
NCKIPSD-203ENST00000415281 ZBTB3Q9H5J0 574 aa16.42■□□□□ 0.22
NCKIPSD-203ENST00000415281 TRIM35Q9UPQ4 493 aa16.42■□□□□ 0.22
NCKIPSD-203ENST00000415281 ANXA1P04083 346 aa16.41■□□□□ 0.22
NCKIPSD-203ENST00000415281 GPTP24298 496 aa16.41■□□□□ 0.22
NCKIPSD-203ENST00000415281 KRT24Q2M2I5 525 aa16.41■□□□□ 0.22
NCKIPSD-203ENST00000415281 RIC1Q4ADV7 1423 aa16.4■□□□□ 0.22
NCKIPSD-203ENST00000415281 NTSR2O95665 410 aa16.4■□□□□ 0.22
NCKIPSD-203ENST00000415281 FKBP4Q02790 459 aaKnown RBP eCLIP16.4■□□□□ 0.22
NCKIPSD-203ENST00000415281 GIGYF2Q6Y7W6 1299 aaKnown RBP16.4■□□□□ 0.22
NCKIPSD-203ENST00000415281 PNNQ9H307 717 aaKnown RBP16.4■□□□□ 0.22
NCKIPSD-203ENST00000415281 TSPYL4Q9UJ04 414 aa16.4■□□□□ 0.22
NCKIPSD-203ENST00000415281 MAPK8IP3Q9UPT6 1336 aa16.4■□□□□ 0.22
NCKIPSD-203ENST00000415281 NPHP1O15259 732 aa16.39■□□□□ 0.21
NCKIPSD-203ENST00000415281 NEFMP07197 916 aa16.39■□□□□ 0.21
NCKIPSD-203ENST00000415281 HOXA10P31260 410 aaPredicted RBP16.39■□□□□ 0.21
NCKIPSD-203ENST00000415281 CCDC93Q567U6 631 aa16.39■□□□□ 0.21
NCKIPSD-203ENST00000415281 DPY19L2Q6NUT2 758 aa16.39■□□□□ 0.21
NCKIPSD-203ENST00000415281 CCDC146Q8IYE0 955 aa16.39■□□□□ 0.21
NCKIPSD-203ENST00000415281 ZNF277Q9NRM2 450 aaPredicted RBP16.39■□□□□ 0.21
NCKIPSD-203ENST00000415281 ERBB4Q15303 1308 aa16.39■□□□□ 0.21
NCKIPSD-203ENST00000415281 ZNF541Q9H0D2 1346 aa16.39■□□□□ 0.21
NCKIPSD-203ENST00000415281 LAMB2P55268 1798 aa16.38■□□□□ 0.21
NCKIPSD-203ENST00000415281 ADAMTSL1Q8N6G6 1762 aa16.38■□□□□ 0.21
NCKIPSD-203ENST00000415281 SCN4AP35499 1836 aa16.38■□□□□ 0.21
NCKIPSD-203ENST00000415281 CHL1O00533 1208 aa16.38■□□□□ 0.21
NCKIPSD-203ENST00000415281 SOGA3Q5TF21 947 aa16.38■□□□□ 0.21
NCKIPSD-203ENST00000415281 BABAM1Q9NWV8 329 aa16.38■□□□□ 0.21
NCKIPSD-203ENST00000415281 MYBBP1AQ9BQG0 1328 aaKnown RBP16.38■□□□□ 0.21
NCKIPSD-203ENST00000415281 IBTKQ9P2D0 1353 aaPredicted RBP16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms