RNA–Protein interactions for RNA: ENST00000415023.1

ITSN1-213, Transcript of intersectin 1, humanhuman

TSL 1 (best)

Gene ITSN1, Length 519 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-213ENST00000415023 TAF1DQ9H5J8 278 aaPredicted RBP13.45□□□□□ -0.26
ITSN1-213ENST00000415023 H0YIN7 160 aa13.44□□□□□ -0.26
ITSN1-213ENST00000415023 C21orf2O43822 256 aa13.44□□□□□ -0.26
ITSN1-213ENST00000415023 CFAP53Q96M91 514 aa13.44□□□□□ -0.26
ITSN1-213ENST00000415023 TMEM88BA6NKF7 163 aa13.43□□□□□ -0.26
ITSN1-213ENST00000415023 U2AF1L5P0DN76 240 aaPredicted RBP13.43□□□□□ -0.26
ITSN1-213ENST00000415023 U2AF1Q01081 240 aaKnown RBP eCLIP13.43□□□□□ -0.26
ITSN1-213ENST00000415023 DDX10Q13206 875 aaKnown RBP13.43□□□□□ -0.26
ITSN1-213ENST00000415023 C7orf43Q8WVR3 580 aa13.43□□□□□ -0.26
ITSN1-213ENST00000415023 AIDAQ96BJ3 306 aa13.43□□□□□ -0.26
ITSN1-213ENST00000415023 LTBP1Q14766 1721 aa13.42□□□□□ -0.26
ITSN1-213ENST00000415023 EIF5P55010 431 aaKnown RBP13.42□□□□□ -0.26
ITSN1-213ENST00000415023 PRR5LQ6MZQ0 368 aa13.42□□□□□ -0.26
ITSN1-213ENST00000415023 VSIG10Q8N0Z9 540 aa13.42□□□□□ -0.26
ITSN1-213ENST00000415023 BRIP1Q9BX63 1249 aa13.42□□□□□ -0.26
ITSN1-213ENST00000415023 TAOK3Q9H2K8 898 aa13.42□□□□□ -0.26
ITSN1-213ENST00000415023 SNED1Q8TER0 1413 aa13.41□□□□□ -0.26
ITSN1-213ENST00000415023 KCNQ3O43525 872 aa13.41□□□□□ -0.26
ITSN1-213ENST00000415023 ZNF790Q6PG37 636 aa13.41□□□□□ -0.26
ITSN1-213ENST00000415023 ZNF496Q96IT1 587 aaPredicted RBP13.41□□□□□ -0.26
ITSN1-213ENST00000415023 NUDCQ9Y266 331 aa13.41□□□□□ -0.26
ITSN1-213ENST00000415023 ZNF541Q9H0D2 1346 aa13.4□□□□□ -0.26
ITSN1-213ENST00000415023 CACNA1SQ13698 1873 aa13.4□□□□□ -0.26
ITSN1-213ENST00000415023 RALBP1Q15311 655 aa13.4□□□□□ -0.26
ITSN1-213ENST00000415023 TBC1D9BQ66K14 1250 aa13.4□□□□□ -0.26
ITSN1-213ENST00000415023 PDZRN3Q9UPQ7 1066 aa13.4□□□□□ -0.26
ITSN1-213ENST00000415023 IQCA1LA6NCM1 817 aa13.39□□□□□ -0.27
ITSN1-213ENST00000415023 MLLT1Q03111 559 aaPredicted RBP13.39□□□□□ -0.27
ITSN1-213ENST00000415023 PRPF40BQ6NWY9 871 aaKnown RBP13.39□□□□□ -0.27
ITSN1-213ENST00000415023 MCM10Q7L590 875 aa13.39□□□□□ -0.27
ITSN1-213ENST00000415023 ZNF219Q9P2Y4 722 aaPredicted RBP13.39□□□□□ -0.27
ITSN1-213ENST00000415023 BCORQ6W2J9 1755 aa13.39□□□□□ -0.27
ITSN1-213ENST00000415023 HEG1Q9ULI3 1381 aa13.38□□□□□ -0.27
ITSN1-213ENST00000415023 HTATSF1O43719 755 aaKnown RBP13.38□□□□□ -0.27
ITSN1-213ENST00000415023 SRGNP10124 158 aa13.38□□□□□ -0.27
ITSN1-213ENST00000415023 PDE6BP35913 854 aa13.38□□□□□ -0.27
ITSN1-213ENST00000415023 DCTN1Q14203 1278 aa13.38□□□□□ -0.27
ITSN1-213ENST00000415023 STYK1Q6J9G0 422 aa13.38□□□□□ -0.27
ITSN1-213ENST00000415023 CCDC24Q8N4L8 307 aa13.38□□□□□ -0.27
ITSN1-213ENST00000415023 ZNF622Q969S3 477 aaKnown RBP eCLIP13.38□□□□□ -0.27
ITSN1-213ENST00000415023 WDR33Q9C0J8 1336 aaKnown RBP13.38□□□□□ -0.27
ITSN1-213ENST00000415023 DEFB115Q30KQ5 88 aa13.37□□□□□ -0.27
ITSN1-213ENST00000415023 BICDL1Q6ZP65 573 aa13.37□□□□□ -0.27
ITSN1-213ENST00000415023 COL4A5P29400 1685 aa13.37□□□□□ -0.27
ITSN1-213ENST00000415023 MAP2K1Q02750 393 aaPredicted RBP13.36□□□□□ -0.27
ITSN1-213ENST00000415023 TEFQ10587 303 aa13.36□□□□□ -0.27
ITSN1-213ENST00000415023 KDM3BQ7LBC6 1761 aa13.35□□□□□ -0.27
ITSN1-213ENST00000415023 PRAMEF22A3QJZ6 481 aa13.35□□□□□ -0.27
ITSN1-213ENST00000415023 CANXP27824 592 aaKnown RBP13.35□□□□□ -0.27
ITSN1-213ENST00000415023 EPHX2P34913 555 aa13.35□□□□□ -0.27
ITSN1-213ENST00000415023 CNKSR1Q969H4 720 aa13.35□□□□□ -0.27
ITSN1-213ENST00000415023 HACL1Q9UJ83 578 aa13.35□□□□□ -0.27
ITSN1-213ENST00000415023 MYBBP1AQ9BQG0 1328 aaKnown RBP13.35□□□□□ -0.27
ITSN1-213ENST00000415023 KLRG2A4D1S0 409 aaPredicted RBP13.34□□□□□ -0.27
ITSN1-213ENST00000415023 BTBD11A6QL63 1104 aa13.34□□□□□ -0.27
ITSN1-213ENST00000415023 CAMTA2O94983 1202 aa13.34□□□□□ -0.27
ITSN1-213ENST00000415023 MAP1SQ66K74 1059 aaPredicted RBP13.34□□□□□ -0.27
ITSN1-213ENST00000415023 CNTROBQ8N137 903 aa13.34□□□□□ -0.27
ITSN1-213ENST00000415023 PRKRIP1Q9H875 184 aaPredicted RBP13.34□□□□□ -0.27
ITSN1-213ENST00000415023 USP16Q9Y5T5 823 aa13.34□□□□□ -0.27
ITSN1-213ENST00000415023 FZD9O00144 591 aa13.33□□□□□ -0.28
ITSN1-213ENST00000415023 FMR1Q06787 632 aaKnown RBP eCLIP13.33□□□□□ -0.28
ITSN1-213ENST00000415023 NFE2L2Q16236 605 aa13.33□□□□□ -0.28
ITSN1-213ENST00000415023 EAPPQ56P03 285 aaPredicted RBP13.33□□□□□ -0.28
ITSN1-213ENST00000415023 SOGA3Q5TF21 947 aa13.33□□□□□ -0.28
ITSN1-213ENST00000415023 A0A087WZG4 1122 aa13.32□□□□□ -0.28
ITSN1-213ENST00000415023 CCDC85CA6NKD9 419 aa13.32□□□□□ -0.28
ITSN1-213ENST00000415023 A1BGP04217 495 aa13.32□□□□□ -0.28
ITSN1-213ENST00000415023 FKBP4Q02790 459 aaKnown RBP eCLIP13.32□□□□□ -0.28
ITSN1-213ENST00000415023 TAF7Q15545 349 aaPredicted RBP13.32□□□□□ -0.28
ITSN1-213ENST00000415023 OLFM4Q6UX06 510 aa13.32□□□□□ -0.28
ITSN1-213ENST00000415023 TTC5Q8N0Z6 440 aa13.32□□□□□ -0.28
ITSN1-213ENST00000415023 CNBD1Q8NA66 436 aa13.32□□□□□ -0.28
ITSN1-213ENST00000415023 MASTLQ96GX5 879 aa13.32□□□□□ -0.28
ITSN1-213ENST00000415023 CAPNS2Q96L46 248 aa13.32□□□□□ -0.28
ITSN1-213ENST00000415023 FMNL2Q96PY5 1086 aa13.32□□□□□ -0.28
ITSN1-213ENST00000415023 THUMPD2Q9BTF0 503 aaKnown RBP13.32□□□□□ -0.28
ITSN1-213ENST00000415023 DDX21Q9NR30 783 aaKnown RBP eCLIP13.32□□□□□ -0.28
ITSN1-213ENST00000415023 RNF123Q5XPI4 1314 aa13.32□□□□□ -0.28
ITSN1-213ENST00000415023 TRPM7Q96QT4 1865 aa13.31□□□□□ -0.28
ITSN1-213ENST00000415023 NBPF26B4DH59 902 aa13.31□□□□□ -0.28
ITSN1-213ENST00000415023 CCDC93Q567U6 631 aa13.31□□□□□ -0.28
ITSN1-213ENST00000415023 NBPF10Q6P3W6 841 aaKnown RBP13.31□□□□□ -0.28
ITSN1-213ENST00000415023 NBPF15Q8N660 670 aa13.31□□□□□ -0.28
ITSN1-213ENST00000415023 TEX13AQ9BXU3 409 aaPredicted RBP13.31□□□□□ -0.28
ITSN1-213ENST00000415023 ZNF277Q9NRM2 450 aaPredicted RBP13.31□□□□□ -0.28
ITSN1-213ENST00000415023 MIS18AQ9NYP9 233 aa13.31□□□□□ -0.28
ITSN1-213ENST00000415023 TBC1D2BQ9UPU7 963 aa13.31□□□□□ -0.28
ITSN1-213ENST00000415023 STARD3NLO95772 234 aa13.3□□□□□ -0.28
ITSN1-213ENST00000415023 IL6STP40189 918 aaPredicted RBP13.3□□□□□ -0.28
ITSN1-213ENST00000415023 CST9Q5W186 159 aa13.3□□□□□ -0.28
ITSN1-213ENST00000415023 PNMA8AQ86V59 439 aaPredicted RBP13.3□□□□□ -0.28
ITSN1-213ENST00000415023 RTF1Q92541 710 aaKnown RBP13.3□□□□□ -0.28
ITSN1-213ENST00000415023 TMPOP42166 694 aaKnown RBP13.29□□□□□ -0.28
ITSN1-213ENST00000415023 CYP4F22Q6NT55 531 aa13.29□□□□□ -0.28
ITSN1-213ENST00000415023 GPC2Q8N158 579 aa13.29□□□□□ -0.28
ITSN1-213ENST00000415023 MCOLN1Q9GZU1 580 aa13.29□□□□□ -0.28
ITSN1-213ENST00000415023 LAMB4A4D0S4 1761 aa13.29□□□□□ -0.28
ITSN1-213ENST00000415023 CASP8AP2Q9UKL3 1982 aa13.29□□□□□ -0.28
ITSN1-213ENST00000415023 SNRPA1P09661 255 aaKnown RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms