RNA–Protein interactions for RNA: ENST00000414368.2

LINC00343-201, long intergenic non-protein coding RNA 343, humanhuman

TSL 2

Gene LINC00343, Length 864 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-201ENST00000414368 FLIIQ13045 1269 aa9.48□□□□□ -0.89
LINC00343-201ENST00000414368 LRRC59Q96AG4 307 aaKnown RBP9.48□□□□□ -0.89
LINC00343-201ENST00000414368 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.48□□□□□ -0.89
LINC00343-201ENST00000414368 SLC6A16Q9GZN6 736 aa9.48□□□□□ -0.89
LINC00343-201ENST00000414368 TRPM3Q9HCF6 1732 aaPredicted RBP9.48□□□□□ -0.89
LINC00343-201ENST00000414368 NUTM2BA6NNL0 878 aaPredicted RBP9.47□□□□□ -0.89
LINC00343-201ENST00000414368 NUTM2EB1AL46 878 aaPredicted RBP9.47□□□□□ -0.89
LINC00343-201ENST00000414368 FUT2Q10981 343 aa9.47□□□□□ -0.89
LINC00343-201ENST00000414368 TUSC1Q2TAM9 212 aa9.47□□□□□ -0.89
LINC00343-201ENST00000414368 CDCA8Q53HL2 280 aa9.47□□□□□ -0.89
LINC00343-201ENST00000414368 NUTM2AQ8IVF1 878 aaPredicted RBP9.47□□□□□ -0.89
LINC00343-201ENST00000414368 CD163L1Q9NR16 1453 aa9.47□□□□□ -0.89
LINC00343-201ENST00000414368 MYOM1P52179 1685 aa9.46□□□□□ -0.89
LINC00343-201ENST00000414368 NUTM2GQ5VZR2 741 aa9.46□□□□□ -0.9
LINC00343-201ENST00000414368 IRF7Q92985 503 aa9.46□□□□□ -0.9
LINC00343-201ENST00000414368 KIFC2Q96AC6 838 aa9.46□□□□□ -0.9
LINC00343-201ENST00000414368 KIF7Q2M1P5 1343 aa9.46□□□□□ -0.9
LINC00343-201ENST00000414368 SPATA31A3Q5VYP0 1347 aa9.46□□□□□ -0.9
LINC00343-201ENST00000414368 KTN1Q86UP2 1357 aaKnown RBP9.46□□□□□ -0.9
LINC00343-201ENST00000414368 CPSF1Q10570 1443 aaKnown RBP9.46□□□□□ -0.9
LINC00343-201ENST00000414368 TTC24A2A3L6 582 aaPredicted RBP9.45□□□□□ -0.9
LINC00343-201ENST00000414368 ATP6V1AP38606 617 aa9.45□□□□□ -0.9
LINC00343-201ENST00000414368 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.45□□□□□ -0.9
LINC00343-201ENST00000414368 CABLES1Q8TDN4 633 aa9.45□□□□□ -0.9
LINC00343-201ENST00000414368 TERF2IPQ9NYB0 399 aa9.45□□□□□ -0.9
LINC00343-201ENST00000414368 NXF1Q9UBU9 619 aaKnown RBP9.45□□□□□ -0.9
LINC00343-201ENST00000414368 WASHC2AQ641Q2 1341 aa9.45□□□□□ -0.9
LINC00343-201ENST00000414368 A0A1W2PP64 1363 aa9.45□□□□□ -0.9
LINC00343-201ENST00000414368 SBNO1A3KN83 1393 aa9.45□□□□□ -0.9
LINC00343-201ENST00000414368 JCADQ9P266 1359 aa9.45□□□□□ -0.9
LINC00343-201ENST00000414368 USP6P35125 1406 aa9.45□□□□□ -0.9
LINC00343-201ENST00000414368 SHPRHQ149N8 1683 aa9.45□□□□□ -0.9
LINC00343-201ENST00000414368 ALS2Q96Q42 1657 aa9.45□□□□□ -0.9
LINC00343-201ENST00000414368 MON2Q7Z3U7 1717 aa9.45□□□□□ -0.9
LINC00343-201ENST00000414368 CD2BP2O95400 341 aaKnown RBP9.44□□□□□ -0.9
LINC00343-201ENST00000414368 RFC5P40937 340 aa9.44□□□□□ -0.9
LINC00343-201ENST00000414368 RPIAP49247 311 aa9.44□□□□□ -0.9
LINC00343-201ENST00000414368 HDGFL2Q7Z4V5 671 aaPredicted RBP9.44□□□□□ -0.9
LINC00343-201ENST00000414368 ZBTB3Q9H5J0 574 aa9.44□□□□□ -0.9
LINC00343-201ENST00000414368 PCDHB15Q9Y5E8 787 aa9.44□□□□□ -0.9
LINC00343-201ENST00000414368 PNPLA6Q8IY17 1366 aa9.44□□□□□ -0.9
LINC00343-201ENST00000414368 CCDC7Q96M83 1385 aa9.44□□□□□ -0.9
LINC00343-201ENST00000414368 TNS3Q68CZ2 1445 aa9.44□□□□□ -0.9
LINC00343-201ENST00000414368 SSH2Q76I76 1423 aa9.43□□□□□ -0.9
LINC00343-201ENST00000414368 NINLQ9Y2I6 1382 aa9.43□□□□□ -0.9
LINC00343-201ENST00000414368 TTC21BQ7Z4L5 1316 aa9.43□□□□□ -0.9
LINC00343-201ENST00000414368 ACTN4O43707 911 aaKnown RBP9.43□□□□□ -0.9
LINC00343-201ENST00000414368 GUCA2AQ02747 115 aa9.43□□□□□ -0.9
LINC00343-201ENST00000414368 PRPF38BQ5VTL8 546 aaKnown RBP9.43□□□□□ -0.9
LINC00343-201ENST00000414368 ABTB2Q8N961 1025 aa9.43□□□□□ -0.9
LINC00343-201ENST00000414368 HLA-CQ95604 372 aa9.43□□□□□ -0.9
LINC00343-201ENST00000414368 CARD14Q9BXL6 1004 aa9.43□□□□□ -0.9
LINC00343-201ENST00000414368 NRKQ7Z2Y5 1582 aa9.42□□□□□ -0.9
LINC00343-201ENST00000414368 ANKRD36BQ8N2N9 1353 aa9.42□□□□□ -0.9
LINC00343-201ENST00000414368 KCNMA1Q12791 1236 aa9.42□□□□□ -0.9
LINC00343-201ENST00000414368 QPCTQ16769 361 aa9.42□□□□□ -0.9
LINC00343-201ENST00000414368 TMEM259Q4ZIN3 620 aa9.42□□□□□ -0.9
LINC00343-201ENST00000414368 PPP2R2DQ66LE6 453 aa9.42□□□□□ -0.9
LINC00343-201ENST00000414368 NME9Q86XW9 330 aa9.42□□□□□ -0.9
LINC00343-201ENST00000414368 PANK3Q9H999 370 aa9.42□□□□□ -0.9
LINC00343-201ENST00000414368 PIK3C2AO00443 1686 aa9.42□□□□□ -0.9
LINC00343-201ENST00000414368 COL22A1Q8NFW1 1626 aaPredicted RBP9.42□□□□□ -0.9
LINC00343-201ENST00000414368 C6orf229H3BNL8 230 aa9.41□□□□□ -0.9
LINC00343-201ENST00000414368 LILRB3O75022 631 aa9.41□□□□□ -0.9
LINC00343-201ENST00000414368 ADAMTS2O95450 1211 aa9.41□□□□□ -0.9
LINC00343-201ENST00000414368 LRP6O75581 1613 aa9.41□□□□□ -0.9
LINC00343-201ENST00000414368 EDC4Q6P2E9 1401 aaKnown RBP9.4□□□□□ -0.9
LINC00343-201ENST00000414368 ARHGEF10O15013 1369 aa9.4□□□□□ -0.9
LINC00343-201ENST00000414368 MARF1Q9Y4F3 1742 aaKnown RBP9.4□□□□□ -0.9
LINC00343-201ENST00000414368 SPATA31A6Q5VVP1 1343 aa9.4□□□□□ -0.9
LINC00343-201ENST00000414368 MTMR2Q13614 643 aa9.4□□□□□ -0.9
LINC00343-201ENST00000414368 PUS10Q3MIT2 529 aaKnown RBP9.4□□□□□ -0.9
LINC00343-201ENST00000414368 PCDHGC3Q9UN70 934 aa9.4□□□□□ -0.9
LINC00343-201ENST00000414368 MED1Q15648 1581 aaPredicted RBP9.4□□□□□ -0.9
LINC00343-201ENST00000414368 ABCA3Q99758 1704 aa9.39□□□□□ -0.91
LINC00343-201ENST00000414368 CRYBG1Q9Y4K1 1723 aa9.39□□□□□ -0.91
LINC00343-201ENST00000414368 BRD4O60885 1362 aaPredicted RBP9.39□□□□□ -0.91
LINC00343-201ENST00000414368 TTC21AQ8NDW8 1320 aa9.39□□□□□ -0.91
LINC00343-201ENST00000414368 Q3C1V9 767 aa9.39□□□□□ -0.91
LINC00343-201ENST00000414368 BANK1Q8NDB2 785 aa9.39□□□□□ -0.91
LINC00343-201ENST00000414368 NSD3Q9BZ95 1437 aa9.39□□□□□ -0.91
LINC00343-201ENST00000414368 FYB1O15117 783 aa9.38□□□□□ -0.91
LINC00343-201ENST00000414368 NR1I2O75469 434 aa9.38□□□□□ -0.91
LINC00343-201ENST00000414368 AP1G2O75843 785 aa9.38□□□□□ -0.91
LINC00343-201ENST00000414368 RTL5Q5HYW3 569 aaPredicted RBP9.38□□□□□ -0.91
LINC00343-201ENST00000414368 MEX3CQ5U5Q3 659 aaKnown RBP9.38□□□□□ -0.91
LINC00343-201ENST00000414368 NLRP13Q86W25 1043 aa9.38□□□□□ -0.91
LINC00343-201ENST00000414368 NPAS3Q8IXF0 933 aa9.38□□□□□ -0.91
LINC00343-201ENST00000414368 TSC1Q92574 1164 aa9.38□□□□□ -0.91
LINC00343-201ENST00000414368 GGNBP2Q9H3C7 697 aa9.38□□□□□ -0.91
LINC00343-201ENST00000414368 SPDYE5A6NIY4 337 aa9.37□□□□□ -0.91
LINC00343-201ENST00000414368 GCP02774 474 aa9.37□□□□□ -0.91
LINC00343-201ENST00000414368 SMPD1P17405 629 aa9.37□□□□□ -0.91
LINC00343-201ENST00000414368 FBLN1P23142 703 aa9.37□□□□□ -0.91
LINC00343-201ENST00000414368 ZC3H6P61129 1189 aaKnown RBP9.37□□□□□ -0.91
LINC00343-201ENST00000414368 MCM6Q14566 821 aa9.37□□□□□ -0.91
LINC00343-201ENST00000414368 MORN1Q5T089 497 aa9.37□□□□□ -0.91
LINC00343-201ENST00000414368 XP32Q5T750 250 aa9.37□□□□□ -0.91
LINC00343-201ENST00000414368 KIF20BQ96Q89 1820 aa9.37□□□□□ -0.91
LINC00343-201ENST00000414368 PHRF1Q9P1Y6 1649 aaKnown RBP9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms