RNA–Protein interactions for RNA: ENST00000414099.6

SCN5A-204, Transcript of sodium voltage-gated channel alpha subunit 5, humanhuman

TSL 1 (best) BASIC

Gene SCN5A, Length 8,303 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN5A-204ENST00000414099 ARAP1Q96P48 1450 aa12.29□□□□□ -0.44
SCN5A-204ENST00000414099 SFPQP23246 707 aaKnown RBP eCLIP12.28□□□□□ -0.44
SCN5A-204ENST00000414099 CALCOCO1Q9P1Z2 691 aa12.28□□□□□ -0.44
SCN5A-204ENST00000414099 TRMT112Q9UI30 125 aaKnown RBP12.28□□□□□ -0.44
SCN5A-204ENST00000414099 KIF21AQ7Z4S6 1674 aa12.28□□□□□ -0.44
SCN5A-204ENST00000414099 TMPOP42166 694 aaKnown RBP12.28□□□□□ -0.44
SCN5A-204ENST00000414099 DUSP27Q5VZP5 1158 aa12.28□□□□□ -0.44
SCN5A-204ENST00000414099 C16orf71Q8IYS4 520 aaPredicted RBP12.28□□□□□ -0.44
SCN5A-204ENST00000414099 TTC12Q9H892 705 aaPredicted RBP12.28□□□□□ -0.44
SCN5A-204ENST00000414099 DBF4Q9UBU7 674 aaPredicted RBP12.28□□□□□ -0.44
SCN5A-204ENST00000414099 SSX2IPQ9Y2D8 614 aa12.28□□□□□ -0.44
SCN5A-204ENST00000414099 CCDC175P0C221 793 aa12.28□□□□□ -0.44
SCN5A-204ENST00000414099 CCDC172P0C7W6 258 aa12.28□□□□□ -0.44
SCN5A-204ENST00000414099 PPM1FP49593 454 aaPredicted RBP12.28□□□□□ -0.44
SCN5A-204ENST00000414099 MPRIPQ6WCQ1 1025 aa12.28□□□□□ -0.44
SCN5A-204ENST00000414099 SLC12A7Q9Y666 1083 aa12.28□□□□□ -0.44
SCN5A-204ENST00000414099 TOM1O60784 492 aa12.28□□□□□ -0.44
SCN5A-204ENST00000414099 PTPN14Q15678 1187 aa12.28□□□□□ -0.44
SCN5A-204ENST00000414099 WDR78Q5VTH9 848 aa12.28□□□□□ -0.44
SCN5A-204ENST00000414099 TSR2Q969E8 191 aaKnown RBP12.28□□□□□ -0.44
SCN5A-204ENST00000414099 ZNF213O14771 459 aa12.28□□□□□ -0.44
SCN5A-204ENST00000414099 PLB1Q6P1J6 1458 aa12.28□□□□□ -0.44
SCN5A-204ENST00000414099 CASTP20810 708 aaKnown RBP12.28□□□□□ -0.44
SCN5A-204ENST00000414099 GSDMDP57764 484 aa12.28□□□□□ -0.44
SCN5A-204ENST00000414099 EHBP1Q8NDI1 1231 aa12.28□□□□□ -0.44
SCN5A-204ENST00000414099 KIF4AO95239 1232 aa12.27□□□□□ -0.44
SCN5A-204ENST00000414099 HDAC9Q9UKV0 1011 aa12.27□□□□□ -0.44
SCN5A-204ENST00000414099 CDK13Q14004 1512 aaKnown RBP12.27□□□□□ -0.44
SCN5A-204ENST00000414099 PTCD1O75127 700 aaKnown RBP12.27□□□□□ -0.44
SCN5A-204ENST00000414099 YEATS4O95619 227 aa12.27□□□□□ -0.44
SCN5A-204ENST00000414099 SSRP1Q08945 709 aaKnown RBP12.27□□□□□ -0.44
SCN5A-204ENST00000414099 FAM177A1Q8N128 213 aaPredicted RBP12.27□□□□□ -0.44
SCN5A-204ENST00000414099 BCL11BQ9C0K0 894 aaPredicted RBP12.27□□□□□ -0.44
SCN5A-204ENST00000414099 PHF8Q9UPP1 1060 aa12.27□□□□□ -0.44
SCN5A-204ENST00000414099 USP37Q86T82 979 aa12.27□□□□□ -0.45
SCN5A-204ENST00000414099 PIBF1Q8WXW3 757 aa12.27□□□□□ -0.45
SCN5A-204ENST00000414099 CALML4Q96GE6 196 aa12.27□□□□□ -0.45
SCN5A-204ENST00000414099 NCOA1Q15788 1441 aa12.27□□□□□ -0.45
SCN5A-204ENST00000414099 ADAMTS2O95450 1211 aa12.27□□□□□ -0.45
SCN5A-204ENST00000414099 CCDC183Q5T5S1 534 aa12.27□□□□□ -0.45
SCN5A-204ENST00000414099 SCAND2PQ9GZW5 306 aaPredicted RBP12.27□□□□□ -0.45
SCN5A-204ENST00000414099 FSD2A1L4K1 749 aa12.26□□□□□ -0.45
SCN5A-204ENST00000414099 BCAR3O75815 825 aa12.26□□□□□ -0.45
SCN5A-204ENST00000414099 PLVAPQ9BX97 442 aa12.26□□□□□ -0.45
SCN5A-204ENST00000414099 CWC25Q9NXE8 425 aaPredicted RBP12.26□□□□□ -0.45
SCN5A-204ENST00000414099 CTNNA2P26232 953 aa12.26□□□□□ -0.45
SCN5A-204ENST00000414099 SMARCC1Q92922 1105 aaPredicted RBP12.26□□□□□ -0.45
SCN5A-204ENST00000414099 GOPCQ9HD26 462 aa12.26□□□□□ -0.45
SCN5A-204ENST00000414099 KANK3Q6NY19 840 aa12.26□□□□□ -0.45
SCN5A-204ENST00000414099 NKTRP30414 1462 aaKnown RBP12.26□□□□□ -0.45
SCN5A-204ENST00000414099 RAPGEF6Q8TEU7 1601 aa12.26□□□□□ -0.45
SCN5A-204ENST00000414099 C6orf229H3BNL8 230 aa12.26□□□□□ -0.45
SCN5A-204ENST00000414099 CCDC113Q9H0I3 377 aa12.26□□□□□ -0.45
SCN5A-204ENST00000414099 FANCAO15360 1455 aa12.26□□□□□ -0.45
SCN5A-204ENST00000414099 CCDC194A0A1B0GVG4 234 aa12.25□□□□□ -0.45
SCN5A-204ENST00000414099 GRIN2AQ12879 1464 aa12.25□□□□□ -0.45
SCN5A-204ENST00000414099 CCDC152Q4G0S7 254 aa12.25□□□□□ -0.45
SCN5A-204ENST00000414099 TCP11L1Q9NUJ3 509 aa12.25□□□□□ -0.45
SCN5A-204ENST00000414099 MYD88Q99836 296 aa12.25□□□□□ -0.45
SCN5A-204ENST00000414099 GOLIM4O00461 696 aa12.25□□□□□ -0.45
SCN5A-204ENST00000414099 TOP1P11387 765 aaKnown RBP12.25□□□□□ -0.45
SCN5A-204ENST00000414099 PRKCSHP14314 528 aaPredicted RBP12.25□□□□□ -0.45
SCN5A-204ENST00000414099 XPCQ01831 940 aaPredicted RBP12.25□□□□□ -0.45
SCN5A-204ENST00000414099 NYXQ9GZU5 481 aa12.25□□□□□ -0.45
SCN5A-204ENST00000414099 MAP4K4O95819 1239 aaPredicted RBP12.25□□□□□ -0.45
SCN5A-204ENST00000414099 C8orf76Q96K31 380 aa12.25□□□□□ -0.45
SCN5A-204ENST00000414099 EIF4G3O43432 1585 aaKnown RBP12.25□□□□□ -0.45
SCN5A-204ENST00000414099 IFNL2Q8IZJ0 200 aa12.24□□□□□ -0.45
SCN5A-204ENST00000414099 NBPF1Q3BBV0 1214 aa12.24□□□□□ -0.45
SCN5A-204ENST00000414099 OGFOD1Q8N543 542 aa12.24□□□□□ -0.45
SCN5A-204ENST00000414099 COMMD10Q9Y6G5 202 aa12.24□□□□□ -0.45
SCN5A-204ENST00000414099 RANBP6O60518 1105 aaKnown RBP12.24□□□□□ -0.45
SCN5A-204ENST00000414099 CAVIN2O95810 425 aa12.24□□□□□ -0.45
SCN5A-204ENST00000414099 NSRP1Q9H0G5 558 aaKnown RBP12.24□□□□□ -0.45
SCN5A-204ENST00000414099 THOC2Q8NI27 1593 aaKnown RBP12.24□□□□□ -0.45
SCN5A-204ENST00000414099 STMN4Q9H169 189 aaPredicted RBP12.24□□□□□ -0.45
SCN5A-204ENST00000414099 PRXQ9BXM0 1461 aa12.24□□□□□ -0.45
SCN5A-204ENST00000414099 AMOTL2Q9Y2J4 779 aa12.24□□□□□ -0.45
SCN5A-204ENST00000414099 MAP3K1Q13233 1512 aa12.23□□□□□ -0.45
SCN5A-204ENST00000414099 WASLO00401 505 aaPredicted RBP12.23□□□□□ -0.45
SCN5A-204ENST00000414099 MX1P20591 662 aa12.23□□□□□ -0.45
SCN5A-204ENST00000414099 NCBP1Q09161 790 aaKnown RBP12.23□□□□□ -0.45
SCN5A-204ENST00000414099 CRNKL1Q9BZJ0 848 aaKnown RBP12.23□□□□□ -0.45
SCN5A-204ENST00000414099 SPINK5Q9NQ38 1064 aaPredicted RBP12.23□□□□□ -0.45
SCN5A-204ENST00000414099 KRT28Q7Z3Y7 464 aa12.23□□□□□ -0.45
SCN5A-204ENST00000414099 ERMNQ8TAM6 284 aa12.23□□□□□ -0.45
SCN5A-204ENST00000414099 UTP14AQ9BVJ6 771 aaKnown RBP12.23□□□□□ -0.45
SCN5A-204ENST00000414099 RBM10P98175 930 aaKnown RBP12.23□□□□□ -0.45
SCN5A-204ENST00000414099 PRPHP41219 470 aa12.22□□□□□ -0.45
SCN5A-204ENST00000414099 EVI5LQ96CN4 794 aa12.22□□□□□ -0.45
SCN5A-204ENST00000414099 IKBKGQ9Y6K9 419 aa12.22□□□□□ -0.45
SCN5A-204ENST00000414099 UQCRFS1P1P0C7P4 283 aa12.22□□□□□ -0.45
SCN5A-204ENST00000414099 NLRP5P59047 1200 aa12.22□□□□□ -0.45
SCN5A-204ENST00000414099 KIF4BQ2VIQ3 1234 aa12.22□□□□□ -0.45
SCN5A-204ENST00000414099 ZSCAN30Q86W11 494 aa12.22□□□□□ -0.45
SCN5A-204ENST00000414099 DNAAF4Q8WXU2 420 aa12.22□□□□□ -0.45
SCN5A-204ENST00000414099 CTNNBL1Q8WYA6 563 aaPredicted RBP12.22□□□□□ -0.45
SCN5A-204ENST00000414099 KAT14Q9H8E8 782 aa12.22□□□□□ -0.45
SCN5A-204ENST00000414099 ACTN2P35609 894 aa12.22□□□□□ -0.45
SCN5A-204ENST00000414099 PKNOX2Q96KN3 472 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms