RNA–Protein interactions for RNA: ENST00000414057.6

SCAMP4-204, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 1 (best)

Gene SCAMP4, Length 1,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-204ENST00000414057 EIF4A1P60842 406 aaKnown RBP22.02■■□□□ 1.12
SCAMP4-204ENST00000414057 NBPF10Q6P3W6 841 aaKnown RBP22.02■■□□□ 1.12
SCAMP4-204ENST00000414057 NBPF15Q8N660 670 aa22.02■■□□□ 1.12
SCAMP4-204ENST00000414057 NBPF5PQ86XG9 351 aaPredicted RBP22.01■■□□□ 1.11
SCAMP4-204ENST00000414057 ZNF622Q969S3 477 aaKnown RBP eCLIP22.01■■□□□ 1.11
SCAMP4-204ENST00000414057 THUMPD2Q9BTF0 503 aaKnown RBP22.01■■□□□ 1.11
SCAMP4-204ENST00000414057 BABAM1Q9NWV8 329 aa22.01■■□□□ 1.11
SCAMP4-204ENST00000414057 RNF181Q9P0P0 153 aa22.01■■□□□ 1.11
SCAMP4-204ENST00000414057 TMPOP42166 694 aaKnown RBP21.99■■□□□ 1.11
SCAMP4-204ENST00000414057 TPTE2Q6XPS3 522 aa21.99■■□□□ 1.11
SCAMP4-204ENST00000414057 TSPYL4Q9UJ04 414 aa21.99■■□□□ 1.11
SCAMP4-204ENST00000414057 DLG5Q8TDM6 1919 aa21.99■■□□□ 1.11
SCAMP4-204ENST00000414057 CNKSR1Q969H4 720 aa21.98■■□□□ 1.11
SCAMP4-204ENST00000414057 NIP7Q9Y221 180 aaKnown RBP eCLIP21.98■■□□□ 1.11
SCAMP4-204ENST00000414057 KDM2BQ8NHM5 1336 aa21.98■■□□□ 1.11
SCAMP4-204ENST00000414057 KIF3CO14782 793 aa21.97■■□□□ 1.11
SCAMP4-204ENST00000414057 LMNB1P20700 586 aa21.97■■□□□ 1.11
SCAMP4-204ENST00000414057 NCBP3Q53F19 620 aaKnown RBP21.97■■□□□ 1.11
SCAMP4-204ENST00000414057 RUNDC1Q96C34 613 aa21.97■■□□□ 1.11
SCAMP4-204ENST00000414057 BCORQ6W2J9 1755 aa21.97■■□□□ 1.11
SCAMP4-204ENST00000414057 ZC3H4Q9UPT8 1303 aaKnown RBP21.97■■□□□ 1.11
SCAMP4-204ENST00000414057 ERVV-1B6SEH8 477 aa21.96■■□□□ 1.11
SCAMP4-204ENST00000414057 KIF6Q6ZMV9 814 aa21.96■■□□□ 1.11
SCAMP4-204ENST00000414057 CCDC24Q8N4L8 307 aa21.96■■□□□ 1.11
SCAMP4-204ENST00000414057 ERBB4Q15303 1308 aa21.96■■□□□ 1.11
SCAMP4-204ENST00000414057 STYK1Q6J9G0 422 aa21.96■■□□□ 1.11
SCAMP4-204ENST00000414057 RRP7AQ9Y3A4 280 aaKnown RBP21.96■■□□□ 1.11
SCAMP4-204ENST00000414057 KDM3BQ7LBC6 1761 aa21.95■■□□□ 1.1
SCAMP4-204ENST00000414057 DLEC1Q9Y238 1755 aa21.95■■□□□ 1.1
SCAMP4-204ENST00000414057 TOMM70O94826 608 aa21.95■■□□□ 1.1
SCAMP4-204ENST00000414057 MASTLQ96GX5 879 aa21.95■■□□□ 1.1
SCAMP4-204ENST00000414057 LAMB4A4D0S4 1761 aa21.94■■□□□ 1.1
SCAMP4-204ENST00000414057 SRGNP10124 158 aa21.94■■□□□ 1.1
SCAMP4-204ENST00000414057 GTF2E1P29083 439 aaPredicted RBP21.94■■□□□ 1.1
SCAMP4-204ENST00000414057 RASSF7Q02833 373 aa21.94■■□□□ 1.1
SCAMP4-204ENST00000414057 SOGA3Q5TF21 947 aa21.94■■□□□ 1.1
SCAMP4-204ENST00000414057 MYL6BP14649 208 aa21.93■■□□□ 1.1
SCAMP4-204ENST00000414057 CCDC146Q8IYE0 955 aa21.93■■□□□ 1.1
SCAMP4-204ENST00000414057 NYXQ9GZU5 481 aa21.93■■□□□ 1.1
SCAMP4-204ENST00000414057 C21orf2O43822 256 aa21.92■■□□□ 1.1
SCAMP4-204ENST00000414057 NEUROD2Q15784 382 aa21.92■■□□□ 1.1
SCAMP4-204ENST00000414057 HLFQ16534 295 aa21.92■■□□□ 1.1
SCAMP4-204ENST00000414057 C16orf71Q8IYS4 520 aaPredicted RBP21.92■■□□□ 1.1
SCAMP4-204ENST00000414057 MAP3K15Q6ZN16 1313 aa21.92■■□□□ 1.1
SCAMP4-204ENST00000414057 HSPA6P17066 643 aa21.91■■□□□ 1.1
SCAMP4-204ENST00000414057 NMRK2Q9NPI5 230 aa21.91■■□□□ 1.1
SCAMP4-204ENST00000414057 NPR1P16066 1061 aa21.9■■□□□ 1.1
SCAMP4-204ENST00000414057 APAF1O14727 1248 aa21.9■■□□□ 1.1
SCAMP4-204ENST00000414057 PRPF40BQ6NWY9 871 aaKnown RBP21.9■■□□□ 1.1
SCAMP4-204ENST00000414057 ANKRD31Q8N7Z5 1873 aa21.9■■□□□ 1.1
SCAMP4-204ENST00000414057 KLRG2A4D1S0 409 aaPredicted RBP21.89■■□□□ 1.09
SCAMP4-204ENST00000414057 FAM177BA6PVY3 158 aa21.89■■□□□ 1.09
SCAMP4-204ENST00000414057 NFKBIEO00221 500 aa21.89■■□□□ 1.09
SCAMP4-204ENST00000414057 EIF2S2P20042 333 aaKnown RBP21.89■■□□□ 1.09
SCAMP4-204ENST00000414057 ZNF219Q9P2Y4 722 aaPredicted RBP21.89■■□□□ 1.09
SCAMP4-204ENST00000414057 TTLL7Q6ZT98 887 aa21.88■■□□□ 1.09
SCAMP4-204ENST00000414057 TAOK3Q9H2K8 898 aa21.88■■□□□ 1.09
SCAMP4-204ENST00000414057 ALDH1B1P30837 517 aa21.87■■□□□ 1.09
SCAMP4-204ENST00000414057 ZNF521Q96K83 1311 aa21.87■■□□□ 1.09
SCAMP4-204ENST00000414057 LTBP3Q9NS15 1303 aa21.87■■□□□ 1.09
SCAMP4-204ENST00000414057 GLTPD2A6NH11 291 aa21.86■■□□□ 1.09
SCAMP4-204ENST00000414057 CHL1O00533 1208 aa21.86■■□□□ 1.09
SCAMP4-204ENST00000414057 CCDC27Q2M243 656 aa21.86■■□□□ 1.09
SCAMP4-204ENST00000414057 DPY19L2Q6NUT2 758 aa21.86■■□□□ 1.09
SCAMP4-204ENST00000414057 RBM46Q8TBY0 533 aaKnown RBP21.86■■□□□ 1.09
SCAMP4-204ENST00000414057 ZBTB3Q9H5J0 574 aa21.86■■□□□ 1.09
SCAMP4-204ENST00000414057 RRAGCQ9HB90 399 aa21.86■■□□□ 1.09
SCAMP4-204ENST00000414057 GIGYF2Q6Y7W6 1299 aaKnown RBP21.85■■□□□ 1.09
SCAMP4-204ENST00000414057 TRIM35Q9UPQ4 493 aa21.85■■□□□ 1.09
SCAMP4-204ENST00000414057 LAS1LQ9Y4W2 734 aaKnown RBP21.85■■□□□ 1.09
SCAMP4-204ENST00000414057 IBTKQ9P2D0 1353 aaPredicted RBP21.85■■□□□ 1.09
SCAMP4-204ENST00000414057 SBF1O95248 1867 aa21.85■■□□□ 1.09
SCAMP4-204ENST00000414057 COL11A2P13942 1736 aaPredicted RBP21.84■■□□□ 1.09
SCAMP4-204ENST00000414057 ERFEQ4G0M1 354 aa21.84■■□□□ 1.09
SCAMP4-204ENST00000414057 CCDC93Q567U6 631 aa21.84■■□□□ 1.09
SCAMP4-204ENST00000414057 PRELPP51888 382 aa21.83■■□□□ 1.09
SCAMP4-204ENST00000414057 PARP10Q53GL7 1025 aa21.83■■□□□ 1.09
SCAMP4-204ENST00000414057 PPP1R42Q7Z4L9 355 aa21.83■■□□□ 1.09
SCAMP4-204ENST00000414057 GPTP24298 496 aa21.83■■□□□ 1.08
SCAMP4-204ENST00000414057 ZNF34Q8IZ26 560 aa21.83■■□□□ 1.08
SCAMP4-204ENST00000414057 SALL2Q9Y467 1007 aaPredicted RBP21.83■■□□□ 1.08
SCAMP4-204ENST00000414057 VEGFAP15692 232 aaPredicted RBP21.82■■□□□ 1.08
SCAMP4-204ENST00000414057 APLP1P51693 650 aa21.82■■□□□ 1.08
SCAMP4-204ENST00000414057 CALD1Q05682 793 aaKnown RBP21.82■■□□□ 1.08
SCAMP4-204ENST00000414057 FSTL1Q12841 308 aa21.82■■□□□ 1.08
SCAMP4-204ENST00000414057 PDIA6Q15084 440 aa21.82■■□□□ 1.08
SCAMP4-204ENST00000414057 HSP90AB3PQ58FF7 597 aa21.82■■□□□ 1.08
SCAMP4-204ENST00000414057 HOXB7P09629 217 aa21.81■■□□□ 1.08
SCAMP4-204ENST00000414057 GOLGA2Q08379 1002 aa21.81■■□□□ 1.08
SCAMP4-204ENST00000414057 NUTM1Q86Y26 1132 aa21.81■■□□□ 1.08
SCAMP4-204ENST00000414057 RTKN2Q8IZC4 609 aa21.81■■□□□ 1.08
SCAMP4-204ENST00000414057 CFAP44Q96MT7 982 aa21.81■■□□□ 1.08
SCAMP4-204ENST00000414057 CRY2Q49AN0 593 aa21.8■■□□□ 1.08
SCAMP4-204ENST00000414057 SUSD4Q5VX71 490 aa21.8■■□□□ 1.08
SCAMP4-204ENST00000414057 LRP10Q7Z4F1 713 aa21.8■■□□□ 1.08
SCAMP4-204ENST00000414057 C7orf43Q8WVR3 580 aa21.8■■□□□ 1.08
SCAMP4-204ENST00000414057 RPGRQ92834 1020 aaKnown RBP21.8■■□□□ 1.08
SCAMP4-204ENST00000414057 DDX21Q9NR30 783 aaKnown RBP eCLIP21.8■■□□□ 1.08
SCAMP4-204ENST00000414057 UBN2Q6ZU65 1347 aa21.79■■□□□ 1.08
SCAMP4-204ENST00000414057 TNRC6CQ9HCJ0 1690 aaKnown RBP21.79■■□□□ 1.08
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