RNA–Protein interactions for RNA: ENST00000413040.6

NUB1-201, Transcript of negative regulator of ubiquitin like proteins 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NUB1, Length 3,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUB1-201ENST00000413040 LRSAM1Q6UWE0 723 aa16.65■□□□□ 0.26
NUB1-201ENST00000413040 CCDC83Q8IWF9 413 aa16.65■□□□□ 0.26
NUB1-201ENST00000413040 RUFY2Q8WXA3 655 aa16.65■□□□□ 0.26
NUB1-201ENST00000413040 FIBPO43427 364 aa16.65■□□□□ 0.26
NUB1-201ENST00000413040 CSB-PGBD3P0DP91 1061 aa16.65■□□□□ 0.26
NUB1-201ENST00000413040 PTH1RQ03431 593 aa16.65■□□□□ 0.26
NUB1-201ENST00000413040 ZSCAN30Q86W11 494 aa16.65■□□□□ 0.26
NUB1-201ENST00000413040 PPP1R9BQ96SB3 815 aa16.65■□□□□ 0.26
NUB1-201ENST00000413040 BOLA2Q9H3K6 86 aa16.65■□□□□ 0.26
NUB1-201ENST00000413040 PTMAP06454 111 aaKnown RBP16.65■□□□□ 0.26
NUB1-201ENST00000413040 HOXB7P09629 217 aa16.65■□□□□ 0.26
NUB1-201ENST00000413040 USP48Q86UV5 1035 aa16.65■□□□□ 0.26
NUB1-201ENST00000413040 LSG1Q9H089 658 aaKnown RBP16.65■□□□□ 0.26
NUB1-201ENST00000413040 PLCB2Q00722 1185 aa16.64■□□□□ 0.25
NUB1-201ENST00000413040 ARHGEF25Q86VW2 580 aa16.64■□□□□ 0.25
NUB1-201ENST00000413040 SUCLG2Q96I99 432 aa16.64■□□□□ 0.25
NUB1-201ENST00000413040 RAPGEF4Q8WZA2 1011 aa16.63■□□□□ 0.25
NUB1-201ENST00000413040 TCEANC2Q96MN5 208 aa16.63■□□□□ 0.25
NUB1-201ENST00000413040 LIMCH1Q9UPQ0 1083 aa16.63■□□□□ 0.25
NUB1-201ENST00000413040 CNPY2Q9Y2B0 182 aa16.63■□□□□ 0.25
NUB1-201ENST00000413040 DDX58O95786 925 aaKnown RBP16.63■□□□□ 0.25
NUB1-201ENST00000413040 ADCK5Q3MIX3 580 aa16.63■□□□□ 0.25
NUB1-201ENST00000413040 SYAP1Q96A49 352 aaPredicted RBP16.63■□□□□ 0.25
NUB1-201ENST00000413040 BICC1Q9H694 974 aaKnown RBP16.63■□□□□ 0.25
NUB1-201ENST00000413040 VPS37CA5D8V6 355 aaPredicted RBP16.63■□□□□ 0.25
NUB1-201ENST00000413040 GRM8O00222 908 aa16.63■□□□□ 0.25
NUB1-201ENST00000413040 KRT28Q7Z3Y7 464 aa16.63■□□□□ 0.25
NUB1-201ENST00000413040 PROSER2Q86WR7 435 aaPredicted RBP16.63■□□□□ 0.25
NUB1-201ENST00000413040 RUFY3Q7L099 469 aa16.62■□□□□ 0.25
NUB1-201ENST00000413040 FAM208AQ9UK61 1670 aaKnown RBP16.62■□□□□ 0.25
NUB1-201ENST00000413040 LARGE1O95461 756 aa16.62■□□□□ 0.25
NUB1-201ENST00000413040 DDX17Q92841 729 aaKnown RBP16.62■□□□□ 0.25
NUB1-201ENST00000413040 FAM227BQ96M60 508 aa16.62■□□□□ 0.25
NUB1-201ENST00000413040 PDRG1Q9NUG6 133 aa16.62■□□□□ 0.25
NUB1-201ENST00000413040 NECAB1Q8N987 351 aa16.61■□□□□ 0.25
NUB1-201ENST00000413040 FSD1Q9BTV5 496 aa16.61■□□□□ 0.25
NUB1-201ENST00000413040 XRN1Q8IZH2 1706 aaKnown RBP16.61■□□□□ 0.25
NUB1-201ENST00000413040 CHMP3Q9Y3E7 222 aa16.61■□□□□ 0.25
NUB1-201ENST00000413040 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.61■□□□□ 0.25
NUB1-201ENST00000413040 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.61■□□□□ 0.25
NUB1-201ENST00000413040 ALDH1L1O75891 902 aa16.61■□□□□ 0.25
NUB1-201ENST00000413040 ZKSCAN1P17029 563 aaPredicted RBP16.61■□□□□ 0.25
NUB1-201ENST00000413040 SYT1P21579 422 aa16.61■□□□□ 0.25
NUB1-201ENST00000413040 NEXNQ0ZGT2 675 aa16.61■□□□□ 0.25
NUB1-201ENST00000413040 NFATC2IPQ8NCF5 419 aa16.61■□□□□ 0.25
NUB1-201ENST00000413040 LINS1Q8NG48 757 aa16.61■□□□□ 0.25
NUB1-201ENST00000413040 EAF2Q96CJ1 260 aaPredicted RBP16.61■□□□□ 0.25
NUB1-201ENST00000413040 TSPY26PQ9H489 355 aa16.61■□□□□ 0.25
NUB1-201ENST00000413040 HYPKQ9NX55 129 aa16.61■□□□□ 0.25
NUB1-201ENST00000413040 STX6O43752 255 aa16.6■□□□□ 0.25
NUB1-201ENST00000413040 ERC1Q8IUD2 1116 aa16.6■□□□□ 0.25
NUB1-201ENST00000413040 MYD88Q99836 296 aa16.6■□□□□ 0.25
NUB1-201ENST00000413040 TLR7Q9NYK1 1049 aaKnown RBP16.6■□□□□ 0.25
NUB1-201ENST00000413040 HDAC5Q9UQL6 1122 aa16.6■□□□□ 0.25
NUB1-201ENST00000413040 TTC41PQ6P2S7 1318 aa16.6■□□□□ 0.25
NUB1-201ENST00000413040 PXDNLA1KZ92 1463 aa16.6■□□□□ 0.25
NUB1-201ENST00000413040 CYP46A1Q9Y6A2 500 aa16.6■□□□□ 0.25
NUB1-201ENST00000413040 COPS6Q7L5N1 327 aa16.59■□□□□ 0.25
NUB1-201ENST00000413040 EDC3Q96F86 508 aaKnown RBP16.59■□□□□ 0.25
NUB1-201ENST00000413040 CACNA1FO60840 1977 aa16.59■□□□□ 0.25
NUB1-201ENST00000413040 CABLES1Q8TDN4 633 aa16.59■□□□□ 0.25
NUB1-201ENST00000413040 XAGE3Q8WTP9 111 aa16.59■□□□□ 0.25
NUB1-201ENST00000413040 FER1L4A9Z1Z3 1794 aa16.59■□□□□ 0.25
NUB1-201ENST00000413040 PXDNQ92626 1479 aa16.59■□□□□ 0.25
NUB1-201ENST00000413040 SASH1O94885 1247 aa16.59■□□□□ 0.25
NUB1-201ENST00000413040 ZSCAN22P10073 491 aaPredicted RBP16.59■□□□□ 0.25
NUB1-201ENST00000413040 GJB2P29033 226 aa16.59■□□□□ 0.25
NUB1-201ENST00000413040 DDX21Q9NR30 783 aaKnown RBP eCLIP16.59■□□□□ 0.25
NUB1-201ENST00000413040 RBM8AQ9Y5S9 174 aaKnown RBP16.59■□□□□ 0.25
NUB1-201ENST00000413040 NMIQ13287 307 aaPredicted RBP16.58■□□□□ 0.24
NUB1-201ENST00000413040 FERMT3Q86UX7 667 aa16.58■□□□□ 0.24
NUB1-201ENST00000413040 EVI5LQ96CN4 794 aa16.58■□□□□ 0.24
NUB1-201ENST00000413040 NDUFB9Q9Y6M9 179 aa16.58■□□□□ 0.24
NUB1-201ENST00000413040 CHRNA2Q15822 529 aa16.58■□□□□ 0.24
NUB1-201ENST00000413040 TTC14Q96N46 770 aa16.58■□□□□ 0.24
NUB1-201ENST00000413040 ATP5J2-PTCD1G3V325 749 aa16.57■□□□□ 0.24
NUB1-201ENST00000413040 PTCD1O75127 700 aaKnown RBP16.57■□□□□ 0.24
NUB1-201ENST00000413040 ZNF790Q6PG37 636 aa16.57■□□□□ 0.24
NUB1-201ENST00000413040 STK3Q13188 491 aa16.57■□□□□ 0.24
NUB1-201ENST00000413040 LTN1O94822 1766 aa16.56■□□□□ 0.24
NUB1-201ENST00000413040 TTC5Q8N0Z6 440 aa16.56■□□□□ 0.24
NUB1-201ENST00000413040 KAZALD1Q96I82 304 aa16.56■□□□□ 0.24
NUB1-201ENST00000413040 LRRC37A3O60309 1634 aa16.56■□□□□ 0.24
NUB1-201ENST00000413040 PHF14O94880 888 aa16.56■□□□□ 0.24
NUB1-201ENST00000413040 DNM1Q05193 864 aaKnown RBP16.56■□□□□ 0.24
NUB1-201ENST00000413040 MTX1Q13505 466 aa16.56■□□□□ 0.24
NUB1-201ENST00000413040 R3HCC1Q9Y3T6 440 aaKnown RBP16.56■□□□□ 0.24
NUB1-201ENST00000413040 TCHHQ07283 1943 aa16.55■□□□□ 0.24
NUB1-201ENST00000413040 CCDC171Q6TFL3 1326 aa16.55■□□□□ 0.24
NUB1-201ENST00000413040 LARP1Q6PKG0 1096 aaKnown RBP16.55■□□□□ 0.24
NUB1-201ENST00000413040 USP16Q9Y5T5 823 aa16.55■□□□□ 0.24
NUB1-201ENST00000413040 F13A1P00488 732 aa16.55■□□□□ 0.24
NUB1-201ENST00000413040 IGKV5-2P06315 115 aa16.55■□□□□ 0.24
NUB1-201ENST00000413040 TATP17735 454 aaPredicted RBP16.55■□□□□ 0.24
NUB1-201ENST00000413040 ZNF496Q96IT1 587 aaPredicted RBP16.55■□□□□ 0.24
NUB1-201ENST00000413040 COL9A3Q14050 684 aaPredicted RBP16.54■□□□□ 0.24
NUB1-201ENST00000413040 CREB3L3Q68CJ9 461 aa16.54■□□□□ 0.24
NUB1-201ENST00000413040 FAM173BQ6P4H8 233 aa16.54■□□□□ 0.24
NUB1-201ENST00000413040 DNAJC2Q99543 621 aaKnown RBP16.54■□□□□ 0.24
NUB1-201ENST00000413040 A0A0D9SFI3 127 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 126.6 ms