RNA–Protein interactions for RNA: ENST00000412966.5

RAB5A-202, Transcript of RAB5A, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5A, Length 622 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5A-202ENST00000412966 SRGNP10124 158 aa18.41■□□□□ 0.54
RAB5A-202ENST00000412966 PIP4K2AP48426 406 aaPredicted RBP18.41■□□□□ 0.54
RAB5A-202ENST00000412966 DZIP3Q86Y13 1208 aaKnown RBP18.41■□□□□ 0.54
RAB5A-202ENST00000412966 STYK1Q6J9G0 422 aa18.4■□□□□ 0.54
RAB5A-202ENST00000412966 PRPF40BQ6NWY9 871 aaKnown RBP18.4■□□□□ 0.54
RAB5A-202ENST00000412966 CNKSR1Q969H4 720 aa18.4■□□□□ 0.54
RAB5A-202ENST00000412966 TAOK3Q9H2K8 898 aa18.4■□□□□ 0.54
RAB5A-202ENST00000412966 ST5P78524 1137 aa18.39■□□□□ 0.53
RAB5A-202ENST00000412966 DDNO94850 711 aaPredicted RBP18.38■□□□□ 0.53
RAB5A-202ENST00000412966 POTEIP0CG38 1075 aa18.38■□□□□ 0.53
RAB5A-202ENST00000412966 POTEJP0CG39 1038 aa18.38■□□□□ 0.53
RAB5A-202ENST00000412966 HSPA1AP0DMV8 641 aaKnown RBP18.38■□□□□ 0.53
RAB5A-202ENST00000412966 HSPA1BP0DMV9 641 aaKnown RBP18.38■□□□□ 0.53
RAB5A-202ENST00000412966 NPM2Q86SE8 214 aaKnown RBP18.38■□□□□ 0.53
RAB5A-202ENST00000412966 MASTLQ96GX5 879 aa18.38■□□□□ 0.53
RAB5A-202ENST00000412966 NPHP1O15259 732 aa18.37■□□□□ 0.53
RAB5A-202ENST00000412966 C7orf43Q8WVR3 580 aa18.37■□□□□ 0.53
RAB5A-202ENST00000412966 CLEC4GQ6UXB4 293 aa18.36■□□□□ 0.53
RAB5A-202ENST00000412966 MCM10Q7L590 875 aa18.36■□□□□ 0.53
RAB5A-202ENST00000412966 SCN4AP35499 1836 aa18.35■□□□□ 0.53
RAB5A-202ENST00000412966 SOGA3Q5TF21 947 aa18.35■□□□□ 0.53
RAB5A-202ENST00000412966 CHADLQ6NUI6 762 aa18.35■□□□□ 0.53
RAB5A-202ENST00000412966 NBPF5PQ86XG9 351 aaPredicted RBP18.35■□□□□ 0.53
RAB5A-202ENST00000412966 TNS4Q8IZW8 715 aa18.35■□□□□ 0.53
RAB5A-202ENST00000412966 CFAP53Q96M91 514 aa18.35■□□□□ 0.53
RAB5A-202ENST00000412966 KLRG2A4D1S0 409 aaPredicted RBP18.34■□□□□ 0.53
RAB5A-202ENST00000412966 NBPF26B4DH59 902 aa18.34■□□□□ 0.53
RAB5A-202ENST00000412966 SNRPA1P09661 255 aaKnown RBP18.34■□□□□ 0.53
RAB5A-202ENST00000412966 DCTN1Q14203 1278 aa18.34■□□□□ 0.53
RAB5A-202ENST00000412966 NBPF10Q6P3W6 841 aaKnown RBP18.34■□□□□ 0.53
RAB5A-202ENST00000412966 NBPF15Q8N660 670 aa18.34■□□□□ 0.53
RAB5A-202ENST00000412966 LAMB4A4D0S4 1761 aa18.33■□□□□ 0.53
RAB5A-202ENST00000412966 CAPN15O75808 1086 aa18.33■□□□□ 0.52
RAB5A-202ENST00000412966 CREBZFQ9NS37 354 aa18.33■□□□□ 0.52
RAB5A-202ENST00000412966 U2AF1L5P0DN76 240 aaPredicted RBP18.32■□□□□ 0.52
RAB5A-202ENST00000412966 NPR1P16066 1061 aa18.32■□□□□ 0.52
RAB5A-202ENST00000412966 U2AF1Q01081 240 aaKnown RBP eCLIP18.32■□□□□ 0.52
RAB5A-202ENST00000412966 CCDC93Q567U6 631 aa18.32■□□□□ 0.52
RAB5A-202ENST00000412966 OLFM4Q6UX06 510 aa18.32■□□□□ 0.52
RAB5A-202ENST00000412966 RTF1Q92541 710 aaKnown RBP18.32■□□□□ 0.52
RAB5A-202ENST00000412966 L3MBTL3Q96JM7 780 aaPredicted RBP18.32■□□□□ 0.52
RAB5A-202ENST00000412966 NUDCQ9Y266 331 aa18.32■□□□□ 0.52
RAB5A-202ENST00000412966 ZNF652Q9Y2D9 606 aa18.32■□□□□ 0.52
RAB5A-202ENST00000412966 DLG5Q8TDM6 1919 aa18.31■□□□□ 0.52
RAB5A-202ENST00000412966 PPP2R1AP30153 589 aa18.31■□□□□ 0.52
RAB5A-202ENST00000412966 NIP7Q9Y221 180 aaKnown RBP eCLIP18.31■□□□□ 0.52
RAB5A-202ENST00000412966 RGL2O15211 777 aa18.3■□□□□ 0.52
RAB5A-202ENST00000412966 FKBP4Q02790 459 aaKnown RBP eCLIP18.3■□□□□ 0.52
RAB5A-202ENST00000412966 HLFQ16534 295 aa18.3■□□□□ 0.52
RAB5A-202ENST00000412966 TAF1DQ9H5J8 278 aaPredicted RBP18.3■□□□□ 0.52
RAB5A-202ENST00000412966 MKRN1Q9UHC7 482 aaKnown RBP18.3■□□□□ 0.52
RAB5A-202ENST00000412966 NUP98P52948 1817 aa18.3■□□□□ 0.52
RAB5A-202ENST00000412966 ADAMTSL1Q8N6G6 1762 aa18.3■□□□□ 0.52
RAB5A-202ENST00000412966 PASKQ96RG2 1323 aa18.29■□□□□ 0.52
RAB5A-202ENST00000412966 ZNF541Q9H0D2 1346 aa18.29■□□□□ 0.52
RAB5A-202ENST00000412966 TPTE2Q6XPS3 522 aa18.29■□□□□ 0.52
RAB5A-202ENST00000412966 ZNF277Q9NRM2 450 aaPredicted RBP18.29■□□□□ 0.52
RAB5A-202ENST00000412966 KDM3BQ7LBC6 1761 aa18.29■□□□□ 0.52
RAB5A-202ENST00000412966 IQCA1LA6NCM1 817 aa18.28■□□□□ 0.52
RAB5A-202ENST00000412966 FAM177BA6PVY3 158 aa18.28■□□□□ 0.52
RAB5A-202ENST00000412966 HTATSF1O43719 755 aaKnown RBP18.28■□□□□ 0.52
RAB5A-202ENST00000412966 LDHDQ86WU2 507 aa18.28■□□□□ 0.52
RAB5A-202ENST00000412966 SNED1Q8TER0 1413 aa18.28■□□□□ 0.52
RAB5A-202ENST00000412966 TAF7Q15545 349 aaPredicted RBP18.27■□□□□ 0.52
RAB5A-202ENST00000412966 MIS18AQ9NYP9 233 aa18.27■□□□□ 0.52
RAB5A-202ENST00000412966 CNTNAP1P78357 1384 aa18.27■□□□□ 0.51
RAB5A-202ENST00000412966 ABCC12Q96J65 1359 aa18.26■□□□□ 0.51
RAB5A-202ENST00000412966 ITGBL1O95965 494 aaPredicted RBP18.25■□□□□ 0.51
RAB5A-202ENST00000412966 RTKN2Q8IZC4 609 aa18.25■□□□□ 0.51
RAB5A-202ENST00000412966 FZD9O00144 591 aa18.24■□□□□ 0.51
RAB5A-202ENST00000412966 SYNE4Q8N205 404 aa18.24■□□□□ 0.51
RAB5A-202ENST00000412966 COL4A5P29400 1685 aa18.23■□□□□ 0.51
RAB5A-202ENST00000412966 ALDH1B1P30837 517 aa18.23■□□□□ 0.51
RAB5A-202ENST00000412966 IARSP41252 1262 aaKnown RBP18.23■□□□□ 0.51
RAB5A-202ENST00000412966 CRY2Q49AN0 593 aa18.23■□□□□ 0.51
RAB5A-202ENST00000412966 EAPPQ56P03 285 aaPredicted RBP18.23■□□□□ 0.51
RAB5A-202ENST00000412966 HACL1Q9UJ83 578 aa18.23■□□□□ 0.51
RAB5A-202ENST00000412966 FOXN1O15353 648 aa18.22■□□□□ 0.51
RAB5A-202ENST00000412966 EPHX2P34913 555 aa18.22■□□□□ 0.51
RAB5A-202ENST00000412966 NUTM1Q86Y26 1132 aa18.22■□□□□ 0.51
RAB5A-202ENST00000412966 NGEFQ8N5V2 710 aa18.22■□□□□ 0.51
RAB5A-202ENST00000412966 RNF123Q5XPI4 1314 aa18.22■□□□□ 0.51
RAB5A-202ENST00000412966 LTBP1Q14766 1721 aa18.21■□□□□ 0.51
RAB5A-202ENST00000412966 TMEM88BA6NKF7 163 aa18.21■□□□□ 0.51
RAB5A-202ENST00000412966 ERVV-1B6SEH8 477 aa18.21■□□□□ 0.51
RAB5A-202ENST00000412966 GTF2E1P29083 439 aaPredicted RBP18.21■□□□□ 0.51
RAB5A-202ENST00000412966 VEGFBP49765 207 aa18.21■□□□□ 0.51
RAB5A-202ENST00000412966 TTLL7Q6ZT98 887 aa18.21■□□□□ 0.51
RAB5A-202ENST00000412966 PSMD1Q99460 953 aa18.21■□□□□ 0.51
RAB5A-202ENST00000412966 MAP3K15Q6ZN16 1313 aa18.21■□□□□ 0.51
RAB5A-202ENST00000412966 UBN2Q6ZU65 1347 aa18.21■□□□□ 0.51
RAB5A-202ENST00000412966 EIF4A1P60842 406 aaKnown RBP18.2■□□□□ 0.5
RAB5A-202ENST00000412966 SLC51AQ86UW1 340 aa18.2■□□□□ 0.5
RAB5A-202ENST00000412966 NYXQ9GZU5 481 aa18.2■□□□□ 0.5
RAB5A-202ENST00000412966 RIC1Q4ADV7 1423 aa18.2■□□□□ 0.5
RAB5A-202ENST00000412966 GPC2Q8N158 579 aa18.19■□□□□ 0.5
RAB5A-202ENST00000412966 PLEKHF1Q96S99 279 aa18.19■□□□□ 0.5
RAB5A-202ENST00000412966 CLEC11AQ9Y240 323 aa18.19■□□□□ 0.5
RAB5A-202ENST00000412966 RRP7AQ9Y3A4 280 aaKnown RBP18.19■□□□□ 0.5
RAB5A-202ENST00000412966 IBTKQ9P2D0 1353 aaPredicted RBP18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms