RNA–Protein interactions for RNA: ENST00000412640.6

SOX9-AS1-201, SOX9 antisense RNA 1, humanhuman

TSL 3 BASIC

Gene SOX9-AS1, Length 635 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-201ENST00000412640 BRPF1P55201 1214 aaPredicted RBP12.89□□□□□ -0.35
SOX9-AS1-201ENST00000412640 PRPF40BQ6NWY9 871 aaKnown RBP12.89□□□□□ -0.35
SOX9-AS1-201ENST00000412640 DNAJC10Q8IXB1 793 aa12.89□□□□□ -0.35
SOX9-AS1-201ENST00000412640 KIF24Q5T7B8 1368 aa12.89□□□□□ -0.35
SOX9-AS1-201ENST00000412640 ANKRD31Q8N7Z5 1873 aa12.89□□□□□ -0.35
SOX9-AS1-201ENST00000412640 SLX4Q8IY92 1834 aa12.88□□□□□ -0.35
SOX9-AS1-201ENST00000412640 PUS7Q96PZ0 661 aaKnown RBP12.88□□□□□ -0.35
SOX9-AS1-201ENST00000412640 BRIP1Q9BX63 1249 aa12.88□□□□□ -0.35
SOX9-AS1-201ENST00000412640 ZNF277Q9NRM2 450 aaPredicted RBP12.88□□□□□ -0.35
SOX9-AS1-201ENST00000412640 COL11A2P13942 1736 aaPredicted RBP12.88□□□□□ -0.35
SOX9-AS1-201ENST00000412640 NBPF15Q8N660 670 aa12.87□□□□□ -0.35
SOX9-AS1-201ENST00000412640 NFATC2IPQ8NCF5 419 aa12.87□□□□□ -0.35
SOX9-AS1-201ENST00000412640 ZIC5Q96T25 663 aa12.87□□□□□ -0.35
SOX9-AS1-201ENST00000412640 COL15A1P39059 1388 aa12.86□□□□□ -0.35
SOX9-AS1-201ENST00000412640 HSP90AB1P08238 724 aaKnown RBP12.86□□□□□ -0.35
SOX9-AS1-201ENST00000412640 SAPCD2Q86UD0 394 aa12.86□□□□□ -0.35
SOX9-AS1-201ENST00000412640 CNKSR1Q969H4 720 aa12.86□□□□□ -0.35
SOX9-AS1-201ENST00000412640 PDZRN3Q9UPQ7 1066 aa12.86□□□□□ -0.35
SOX9-AS1-201ENST00000412640 CACNA1SQ13698 1873 aa12.86□□□□□ -0.35
SOX9-AS1-201ENST00000412640 CYP19A1P11511 503 aaPredicted RBP12.85□□□□□ -0.35
SOX9-AS1-201ENST00000412640 CDCA8Q53HL2 280 aa12.85□□□□□ -0.35
SOX9-AS1-201ENST00000412640 SOGA3Q5TF21 947 aa12.85□□□□□ -0.35
SOX9-AS1-201ENST00000412640 TBC1D9BQ66K14 1250 aa12.85□□□□□ -0.35
SOX9-AS1-201ENST00000412640 PRR5LQ6MZQ0 368 aa12.85□□□□□ -0.35
SOX9-AS1-201ENST00000412640 ZBTB1Q9Y2K1 713 aa12.85□□□□□ -0.35
SOX9-AS1-201ENST00000412640 GJA3Q9Y6H8 435 aa12.85□□□□□ -0.35
SOX9-AS1-201ENST00000412640 EPS15P42566 896 aa12.84□□□□□ -0.35
SOX9-AS1-201ENST00000412640 MTHFSP49914 203 aa12.84□□□□□ -0.35
SOX9-AS1-201ENST00000412640 STYK1Q6J9G0 422 aa12.84□□□□□ -0.35
SOX9-AS1-201ENST00000412640 ZNF530Q6P9A1 599 aaPredicted RBP12.84□□□□□ -0.35
SOX9-AS1-201ENST00000412640 OLFM4Q6UX06 510 aa12.84□□□□□ -0.35
SOX9-AS1-201ENST00000412640 GPC2Q8N158 579 aa12.84□□□□□ -0.35
SOX9-AS1-201ENST00000412640 PRKRIP1Q9H875 184 aaPredicted RBP12.84□□□□□ -0.35
SOX9-AS1-201ENST00000412640 TRPM7Q96QT4 1865 aa12.84□□□□□ -0.35
SOX9-AS1-201ENST00000412640 FZD9O00144 591 aa12.83□□□□□ -0.36
SOX9-AS1-201ENST00000412640 DLL1O00548 723 aa12.83□□□□□ -0.36
SOX9-AS1-201ENST00000412640 CELF2O95319 508 aaKnown RBP12.83□□□□□ -0.36
SOX9-AS1-201ENST00000412640 SRGNP10124 158 aa12.83□□□□□ -0.36
SOX9-AS1-201ENST00000412640 FKBP4Q02790 459 aaKnown RBP eCLIP12.83□□□□□ -0.36
SOX9-AS1-201ENST00000412640 CCDC93Q567U6 631 aa12.83□□□□□ -0.36
SOX9-AS1-201ENST00000412640 C7orf43Q8WVR3 580 aa12.83□□□□□ -0.36
SOX9-AS1-201ENST00000412640 LMOD1P29536 600 aaPredicted RBP12.82□□□□□ -0.36
SOX9-AS1-201ENST00000412640 FXR1P51114 621 aaKnown RBP eCLIP12.82□□□□□ -0.36
SOX9-AS1-201ENST00000412640 CENPBP07199 599 aaPredicted RBP12.81□□□□□ -0.36
SOX9-AS1-201ENST00000412640 CANXP27824 592 aaKnown RBP12.81□□□□□ -0.36
SOX9-AS1-201ENST00000412640 PLEKHO1Q53GL0 409 aaPredicted RBP12.81□□□□□ -0.36
SOX9-AS1-201ENST00000412640 MASTLQ96GX5 879 aa12.81□□□□□ -0.36
SOX9-AS1-201ENST00000412640 ZNF408Q9H9D4 720 aa12.81□□□□□ -0.36
SOX9-AS1-201ENST00000412640 NPHP1O15259 732 aa12.8□□□□□ -0.36
SOX9-AS1-201ENST00000412640 IARSP41252 1262 aaKnown RBP12.8□□□□□ -0.36
SOX9-AS1-201ENST00000412640 SYNE4Q8N205 404 aa12.8□□□□□ -0.36
SOX9-AS1-201ENST00000412640 HHIPL1Q96JK4 782 aa12.8□□□□□ -0.36
SOX9-AS1-201ENST00000412640 HPS5Q9UPZ3 1129 aa12.8□□□□□ -0.36
SOX9-AS1-201ENST00000412640 PER1O15534 1290 aaPredicted RBP12.79□□□□□ -0.36
SOX9-AS1-201ENST00000412640 SCNN1DP51172 638 aa12.79□□□□□ -0.36
SOX9-AS1-201ENST00000412640 NOGQ13253 232 aa12.79□□□□□ -0.36
SOX9-AS1-201ENST00000412640 EIF4A2Q14240 407 aaKnown RBP12.79□□□□□ -0.36
SOX9-AS1-201ENST00000412640 CTU1Q7Z7A3 348 aaKnown RBP12.79□□□□□ -0.36
SOX9-AS1-201ENST00000412640 TRPA1O75762 1119 aa12.78□□□□□ -0.36
SOX9-AS1-201ENST00000412640 SLC39A6Q13433 755 aa12.78□□□□□ -0.36
SOX9-AS1-201ENST00000412640 USP50Q70EL3 339 aaPredicted RBP12.78□□□□□ -0.36
SOX9-AS1-201ENST00000412640 CNBD1Q8NA66 436 aa12.78□□□□□ -0.36
SOX9-AS1-201ENST00000412640 POLR3GLQ9BT43 218 aa12.78□□□□□ -0.36
SOX9-AS1-201ENST00000412640 GLIS2Q9BZE0 524 aaPredicted RBP12.78□□□□□ -0.36
SOX9-AS1-201ENST00000412640 KIF20BQ96Q89 1820 aa12.78□□□□□ -0.36
SOX9-AS1-201ENST00000412640 ARFGEF2Q9Y6D5 1785 aa12.77□□□□□ -0.36
SOX9-AS1-201ENST00000412640 EIF6P56537 245 aaKnown RBP12.77□□□□□ -0.37
SOX9-AS1-201ENST00000412640 C1orf141Q5JVX7 400 aa12.77□□□□□ -0.37
SOX9-AS1-201ENST00000412640 JDP2Q8WYK2 163 aa12.77□□□□□ -0.37
SOX9-AS1-201ENST00000412640 ST5P78524 1137 aa12.76□□□□□ -0.37
SOX9-AS1-201ENST00000412640 RTKN2Q8IZC4 609 aa12.76□□□□□ -0.37
SOX9-AS1-201ENST00000412640 RNF186Q9NXI6 227 aa12.76□□□□□ -0.37
SOX9-AS1-201ENST00000412640 TBC1D2BQ9UPU7 963 aa12.76□□□□□ -0.37
SOX9-AS1-201ENST00000412640 ANKRD26Q9UPS8 1709 aa12.76□□□□□ -0.37
SOX9-AS1-201ENST00000412640 EIF5P55010 431 aaKnown RBP12.75□□□□□ -0.37
SOX9-AS1-201ENST00000412640 RALBP1Q15311 655 aa12.75□□□□□ -0.37
SOX9-AS1-201ENST00000412640 AMOTQ4VCS5 1084 aa12.75□□□□□ -0.37
SOX9-AS1-201ENST00000412640 AKAP4Q5JQC9 854 aa12.75□□□□□ -0.37
SOX9-AS1-201ENST00000412640 SETDB2Q96T68 719 aa12.75□□□□□ -0.37
SOX9-AS1-201ENST00000412640 SAGE1Q9NXZ1 904 aa12.75□□□□□ -0.37
SOX9-AS1-201ENST00000412640 POLKQ9UBT6 870 aa12.75□□□□□ -0.37
SOX9-AS1-201ENST00000412640 ZNF330Q9Y3S2 320 aaPredicted RBP12.75□□□□□ -0.37
SOX9-AS1-201ENST00000412640 COL4A5P29400 1685 aa12.74□□□□□ -0.37
SOX9-AS1-201ENST00000412640 NPC1L1Q9UHC9 1359 aa12.74□□□□□ -0.37
SOX9-AS1-201ENST00000412640 NPR1P16066 1061 aa12.74□□□□□ -0.37
SOX9-AS1-201ENST00000412640 HUNKP57058 714 aa12.74□□□□□ -0.37
SOX9-AS1-201ENST00000412640 KIF23Q02241 960 aaPredicted RBP12.74□□□□□ -0.37
SOX9-AS1-201ENST00000412640 YTHDC1Q96MU7 727 aaKnown RBP12.74□□□□□ -0.37
SOX9-AS1-201ENST00000412640 PANK3Q9H999 370 aa12.74□□□□□ -0.37
SOX9-AS1-201ENST00000412640 A0A087WZG4 1122 aa12.73□□□□□ -0.37
SOX9-AS1-201ENST00000412640 FAM155AB1AL88 458 aaPredicted RBP12.73□□□□□ -0.37
SOX9-AS1-201ENST00000412640 SLC17A8Q8NDX2 589 aa12.73□□□□□ -0.37
SOX9-AS1-201ENST00000412640 ADARB2Q9NS39 739 aaKnown RBP12.73□□□□□ -0.37
SOX9-AS1-201ENST00000412640 DLK2Q6UY11 383 aa12.72□□□□□ -0.37
SOX9-AS1-201ENST00000412640 CARD14Q9BXL6 1004 aa12.72□□□□□ -0.37
SOX9-AS1-201ENST00000412640 SLC52A2Q9HAB3 445 aa12.72□□□□□ -0.37
SOX9-AS1-201ENST00000412640 LGR6Q9HBX8 967 aa12.72□□□□□ -0.37
SOX9-AS1-201ENST00000412640 AEBP1Q8IUX7 1158 aa12.71□□□□□ -0.37
SOX9-AS1-201ENST00000412640 BCORQ6W2J9 1755 aa12.71□□□□□ -0.38
SOX9-AS1-201ENST00000412640 SCN11AQ9UI33 1791 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms