RNA–Protein interactions for RNA: ENST00000412507.1

TRIM56-202, Transcript of tripartite motif containing 56, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRIM56, Length 1,129 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-202ENST00000412507 COL11A2P13942 1736 aaPredicted RBP24.55■■□□□ 1.52
TRIM56-202ENST00000412507 ZNF853P0CG23 659 aa24.55■■□□□ 1.52
TRIM56-202ENST00000412507 HLFQ16534 295 aa24.55■■□□□ 1.52
TRIM56-202ENST00000412507 TTLL7Q6ZT98 887 aa24.55■■□□□ 1.52
TRIM56-202ENST00000412507 BCS1LQ9Y276 419 aa24.55■■□□□ 1.52
TRIM56-202ENST00000412507 GNAI1P63096 354 aa24.54■■□□□ 1.52
TRIM56-202ENST00000412507 CALD1Q05682 793 aaKnown RBP24.54■■□□□ 1.52
TRIM56-202ENST00000412507 PDIA6Q15084 440 aa24.54■■□□□ 1.52
TRIM56-202ENST00000412507 PRR5LQ6MZQ0 368 aa24.54■■□□□ 1.52
TRIM56-202ENST00000412507 IFT57Q9NWB7 429 aa24.54■■□□□ 1.52
TRIM56-202ENST00000412507 ANKRD36CQ5JPF3 1778 aa24.54■■□□□ 1.52
TRIM56-202ENST00000412507 ANXA1P04083 346 aa24.53■■□□□ 1.52
TRIM56-202ENST00000412507 PROSER3Q2NL68 480 aa24.53■■□□□ 1.52
TRIM56-202ENST00000412507 CCDC24Q8N4L8 307 aa24.53■■□□□ 1.52
TRIM56-202ENST00000412507 RGL2O15211 777 aa24.52■■□□□ 1.52
TRIM56-202ENST00000412507 KIF6Q6ZMV9 814 aa24.52■■□□□ 1.52
TRIM56-202ENST00000412507 FAM9BQ8IZU0 186 aa24.52■■□□□ 1.52
TRIM56-202ENST00000412507 PIM2Q9P1W9 311 aa24.52■■□□□ 1.52
TRIM56-202ENST00000412507 MAP3K15Q6ZN16 1313 aa24.52■■□□□ 1.52
TRIM56-202ENST00000412507 LRP10Q7Z4F1 713 aa24.51■■□□□ 1.51
TRIM56-202ENST00000412507 NIP7Q9Y221 180 aaKnown RBP eCLIP24.51■■□□□ 1.51
TRIM56-202ENST00000412507 ERVV-1B6SEH8 477 aa24.5■■□□□ 1.51
TRIM56-202ENST00000412507 NPHP1O15259 732 aa24.5■■□□□ 1.51
TRIM56-202ENST00000412507 CCDC27Q2M243 656 aa24.5■■□□□ 1.51
TRIM56-202ENST00000412507 CNBD1Q8NA66 436 aa24.5■■□□□ 1.51
TRIM56-202ENST00000412507 ZBTB3Q9H5J0 574 aa24.5■■□□□ 1.51
TRIM56-202ENST00000412507 CCDC88AQ3V6T2 1871 aa24.49■■□□□ 1.51
TRIM56-202ENST00000412507 C2CD5Q86YS7 1000 aa24.49■■□□□ 1.51
TRIM56-202ENST00000412507 SBF1O95248 1867 aa24.49■■□□□ 1.51
TRIM56-202ENST00000412507 HOXB7P09629 217 aa24.48■■□□□ 1.51
TRIM56-202ENST00000412507 HDGFL1Q5TGJ6 251 aa24.48■■□□□ 1.51
TRIM56-202ENST00000412507 DUSP27Q5VZP5 1158 aa24.48■■□□□ 1.51
TRIM56-202ENST00000412507 NBPF5PQ86XG9 351 aaPredicted RBP24.48■■□□□ 1.51
TRIM56-202ENST00000412507 WWC1Q8IX03 1113 aa24.48■■□□□ 1.51
TRIM56-202ENST00000412507 FAM177BA6PVY3 158 aa24.47■■□□□ 1.51
TRIM56-202ENST00000412507 ST5P78524 1137 aa24.47■■□□□ 1.51
TRIM56-202ENST00000412507 DALRD3Q5D0E6 543 aaKnown RBP24.47■■□□□ 1.51
TRIM56-202ENST00000412507 BRIP1Q9BX63 1249 aa24.47■■□□□ 1.51
TRIM56-202ENST00000412507 DDX21Q9NR30 783 aaKnown RBP eCLIP24.47■■□□□ 1.51
TRIM56-202ENST00000412507 SALL2Q9Y467 1007 aaPredicted RBP24.47■■□□□ 1.51
TRIM56-202ENST00000412507 ARFGEF2Q9Y6D5 1785 aa24.47■■□□□ 1.51
TRIM56-202ENST00000412507 H0YIN7 160 aa24.46■■□□□ 1.51
TRIM56-202ENST00000412507 CHPF2Q9P2E5 772 aa24.46■■□□□ 1.51
TRIM56-202ENST00000412507 ATP10DQ9P241 1426 aa24.45■■□□□ 1.51
TRIM56-202ENST00000412507 ELL2O00472 640 aaPredicted RBP24.45■■□□□ 1.5
TRIM56-202ENST00000412507 PDE6BP35913 854 aa24.45■■□□□ 1.5
TRIM56-202ENST00000412507 AIMP1Q12904 312 aaKnown RBP24.45■■□□□ 1.5
TRIM56-202ENST00000412507 NCBP3Q53F19 620 aaKnown RBP24.45■■□□□ 1.5
TRIM56-202ENST00000412507 COPS6Q7L5N1 327 aa24.45■■□□□ 1.5
TRIM56-202ENST00000412507 GIGYF2Q6Y7W6 1299 aaKnown RBP24.44■■□□□ 1.5
TRIM56-202ENST00000412507 ARHGAP27Q6ZUM4 889 aa24.44■■□□□ 1.5
TRIM56-202ENST00000412507 XAGE3Q8WTP9 111 aa24.44■■□□□ 1.5
TRIM56-202ENST00000412507 SLX4Q8IY92 1834 aa24.44■■□□□ 1.5
TRIM56-202ENST00000412507 TNRC6CQ9HCJ0 1690 aaKnown RBP24.43■■□□□ 1.5
TRIM56-202ENST00000412507 GPTP24298 496 aa24.43■■□□□ 1.5
TRIM56-202ENST00000412507 TPTE2Q6XPS3 522 aa24.43■■□□□ 1.5
TRIM56-202ENST00000412507 C8orf58Q8NAV2 365 aa24.43■■□□□ 1.5
TRIM56-202ENST00000412507 ZNF784Q8NCA9 323 aaPredicted RBP24.43■■□□□ 1.5
TRIM56-202ENST00000412507 TSR2Q969E8 191 aaKnown RBP24.43■■□□□ 1.5
TRIM56-202ENST00000412507 PDZRN3Q9UPQ7 1066 aa24.42■■□□□ 1.5
TRIM56-202ENST00000412507 ZNF34Q8IZ26 560 aa24.41■■□□□ 1.5
TRIM56-202ENST00000412507 TTLL6Q8N841 843 aa24.41■■□□□ 1.5
TRIM56-202ENST00000412507 ZNF622Q969S3 477 aaKnown RBP eCLIP24.41■■□□□ 1.5
TRIM56-202ENST00000412507 DBF4Q9UBU7 674 aaPredicted RBP24.41■■□□□ 1.5
TRIM56-202ENST00000412507 CACNA1FO60840 1977 aa24.41■■□□□ 1.5
TRIM56-202ENST00000412507 UBN2Q6ZU65 1347 aa24.4■■□□□ 1.5
TRIM56-202ENST00000412507 IL16Q14005 1332 aa24.39■■□□□ 1.5
TRIM56-202ENST00000412507 GTF2E1P29083 439 aaPredicted RBP24.39■■□□□ 1.49
TRIM56-202ENST00000412507 NYXQ9GZU5 481 aa24.39■■□□□ 1.49
TRIM56-202ENST00000412507 FER1L6Q2WGJ9 1857 aa24.38■■□□□ 1.49
TRIM56-202ENST00000412507 SUSD4Q5VX71 490 aa24.38■■□□□ 1.49
TRIM56-202ENST00000412507 NUTM1Q86Y26 1132 aa24.38■■□□□ 1.49
TRIM56-202ENST00000412507 TSPYL6Q8N831 410 aa24.38■■□□□ 1.49
TRIM56-202ENST00000412507 LAMB2P55268 1798 aa24.38■■□□□ 1.49
TRIM56-202ENST00000412507 SRGNP10124 158 aa24.37■■□□□ 1.49
TRIM56-202ENST00000412507 HYPKQ9NX55 129 aa24.37■■□□□ 1.49
TRIM56-202ENST00000412507 ERFEQ4G0M1 354 aa24.36■■□□□ 1.49
TRIM56-202ENST00000412507 WDR63Q8IWG1 891 aa24.36■■□□□ 1.49
TRIM56-202ENST00000412507 ABCC12Q96J65 1359 aa24.36■■□□□ 1.49
TRIM56-202ENST00000412507 ADCY9O60503 1353 aa24.35■■□□□ 1.49
TRIM56-202ENST00000412507 IBTKQ9P2D0 1353 aaPredicted RBP24.35■■□□□ 1.49
TRIM56-202ENST00000412507 STYK1Q6J9G0 422 aa24.35■■□□□ 1.49
TRIM56-202ENST00000412507 MASTLQ96GX5 879 aa24.35■■□□□ 1.49
TRIM56-202ENST00000412507 DICER1Q9UPY3 1922 aaKnown RBP24.34■■□□□ 1.49
TRIM56-202ENST00000412507 NTSR2O95665 410 aa24.34■■□□□ 1.49
TRIM56-202ENST00000412507 PARP10Q53GL7 1025 aa24.34■■□□□ 1.49
TRIM56-202ENST00000412507 HSP90AB3PQ58FF7 597 aa24.34■■□□□ 1.49
TRIM56-202ENST00000412507 PPP1R42Q7Z4L9 355 aa24.34■■□□□ 1.49
TRIM56-202ENST00000412507 PHAXQ9H814 394 aaKnown RBP24.34■■□□□ 1.49
TRIM56-202ENST00000412507 KLRG2A4D1S0 409 aaPredicted RBP24.33■■□□□ 1.49
TRIM56-202ENST00000412507 TCIRG1Q13488 830 aa24.33■■□□□ 1.49
TRIM56-202ENST00000412507 ANKRD13DQ6ZTN6 518 aa24.33■■□□□ 1.49
TRIM56-202ENST00000412507 PLBD2Q8NHP8 589 aa24.33■■□□□ 1.49
TRIM56-202ENST00000412507 CNKSR1Q969H4 720 aa24.33■■□□□ 1.49
TRIM56-202ENST00000412507 ZNF219Q9P2Y4 722 aaPredicted RBP24.33■■□□□ 1.49
TRIM56-202ENST00000412507 FANCIQ9NVI1 1328 aa24.33■■□□□ 1.48
TRIM56-202ENST00000412507 CCDC30Q5VVM6 783 aa24.32■■□□□ 1.48
TRIM56-202ENST00000412507 C21orf2O43822 256 aa24.31■■□□□ 1.48
TRIM56-202ENST00000412507 NPR1P16066 1061 aa24.31■■□□□ 1.48
TRIM56-202ENST00000412507 TWISTNBQ3B726 338 aaPredicted RBP24.31■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms