RNA–Protein interactions for RNA: ENST00000412218.1

LINC01643-201, Transcript of long intergenic non-protein coding RNA 1643, humanhuman

TSL 5 BASIC

Gene LINC01643, Length 757 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01643-201ENST00000412218 H0YIN7 160 aa13.34□□□□□ -0.27
LINC01643-201ENST00000412218 PDE6BP35913 854 aa13.34□□□□□ -0.27
LINC01643-201ENST00000412218 RUNDC1Q96C34 613 aa13.34□□□□□ -0.27
LINC01643-201ENST00000412218 BABAM1Q9NWV8 329 aa13.34□□□□□ -0.27
LINC01643-201ENST00000412218 TSPYL4Q9UJ04 414 aa13.34□□□□□ -0.27
LINC01643-201ENST00000412218 PDZRN3Q9UPQ7 1066 aa13.34□□□□□ -0.27
LINC01643-201ENST00000412218 RRP7AQ9Y3A4 280 aaKnown RBP13.34□□□□□ -0.27
LINC01643-201ENST00000412218 ST5P78524 1137 aa13.33□□□□□ -0.28
LINC01643-201ENST00000412218 C9orf131Q5VYM1 1079 aa13.33□□□□□ -0.28
LINC01643-201ENST00000412218 CCDC24Q8N4L8 307 aa13.33□□□□□ -0.28
LINC01643-201ENST00000412218 TTLL6Q8N841 843 aa13.33□□□□□ -0.28
LINC01643-201ENST00000412218 ADAMTS8Q9UP79 889 aa13.33□□□□□ -0.28
LINC01643-201ENST00000412218 TRIM35Q9UPQ4 493 aa13.32□□□□□ -0.28
LINC01643-201ENST00000412218 ERBB4Q15303 1308 aa13.32□□□□□ -0.28
LINC01643-201ENST00000412218 NPHP1O15259 732 aa13.31□□□□□ -0.28
LINC01643-201ENST00000412218 HLFQ16534 295 aa13.31□□□□□ -0.28
LINC01643-201ENST00000412218 NBPF5PQ86XG9 351 aaPredicted RBP13.31□□□□□ -0.28
LINC01643-201ENST00000412218 NIP7Q9Y221 180 aaKnown RBP eCLIP13.31□□□□□ -0.28
LINC01643-201ENST00000412218 ERVV-1B6SEH8 477 aa13.3□□□□□ -0.28
LINC01643-201ENST00000412218 RASSF7Q02833 373 aa13.3□□□□□ -0.28
LINC01643-201ENST00000412218 NEUROD2Q15784 382 aa13.3□□□□□ -0.28
LINC01643-201ENST00000412218 ZNF622Q969S3 477 aaKnown RBP eCLIP13.3□□□□□ -0.28
LINC01643-201ENST00000412218 RNF181Q9P0P0 153 aa13.3□□□□□ -0.28
LINC01643-201ENST00000412218 MAP3K15Q6ZN16 1313 aa13.3□□□□□ -0.28
LINC01643-201ENST00000412218 SENP3-EIF4A1A0A087X0R7 540 aa13.29□□□□□ -0.28
LINC01643-201ENST00000412218 KIF3CO14782 793 aa13.29□□□□□ -0.28
LINC01643-201ENST00000412218 SRGNP10124 158 aa13.29□□□□□ -0.28
LINC01643-201ENST00000412218 MYL6BP14649 208 aa13.29□□□□□ -0.28
LINC01643-201ENST00000412218 STYK1Q6J9G0 422 aa13.29□□□□□ -0.28
LINC01643-201ENST00000412218 KIF6Q6ZMV9 814 aa13.29□□□□□ -0.28
LINC01643-201ENST00000412218 TTLL7Q6ZT98 887 aa13.29□□□□□ -0.28
LINC01643-201ENST00000412218 LRP10Q7Z4F1 713 aa13.29□□□□□ -0.28
LINC01643-201ENST00000412218 NGEFQ8N5V2 710 aa13.29□□□□□ -0.28
LINC01643-201ENST00000412218 NFKBIEO00221 500 aa13.28□□□□□ -0.28
LINC01643-201ENST00000412218 CHL1O00533 1208 aa13.28□□□□□ -0.28
LINC01643-201ENST00000412218 PRELPP51888 382 aa13.28□□□□□ -0.28
LINC01643-201ENST00000412218 PDIA6Q15084 440 aa13.28□□□□□ -0.28
LINC01643-201ENST00000412218 TPTE2Q6XPS3 522 aa13.28□□□□□ -0.28
LINC01643-201ENST00000412218 MASTLQ96GX5 879 aa13.28□□□□□ -0.28
LINC01643-201ENST00000412218 KLRG2A4D1S0 409 aaPredicted RBP13.27□□□□□ -0.29
LINC01643-201ENST00000412218 C21orf2O43822 256 aa13.27□□□□□ -0.29
LINC01643-201ENST00000412218 LMNB1P20700 586 aa13.27□□□□□ -0.29
LINC01643-201ENST00000412218 CNKSR1Q969H4 720 aa13.27□□□□□ -0.29
LINC01643-201ENST00000412218 ZBTB3Q9H5J0 574 aa13.27□□□□□ -0.29
LINC01643-201ENST00000412218 ZC3H4Q9UPT8 1303 aaKnown RBP13.27□□□□□ -0.29
LINC01643-201ENST00000412218 IBTKQ9P2D0 1353 aaPredicted RBP13.27□□□□□ -0.29
LINC01643-201ENST00000412218 TNRC6CQ9HCJ0 1690 aaKnown RBP13.27□□□□□ -0.29
LINC01643-201ENST00000412218 ARFGEF2Q9Y6D5 1785 aa13.27□□□□□ -0.29
LINC01643-201ENST00000412218 FAM177BA6PVY3 158 aa13.26□□□□□ -0.29
LINC01643-201ENST00000412218 EIF2S2P20042 333 aaKnown RBP13.26□□□□□ -0.29
LINC01643-201ENST00000412218 PROSER3Q2NL68 480 aa13.26□□□□□ -0.29
LINC01643-201ENST00000412218 PRPF40BQ6NWY9 871 aaKnown RBP13.26□□□□□ -0.29
LINC01643-201ENST00000412218 UBN2Q6ZU65 1347 aa13.26□□□□□ -0.29
LINC01643-201ENST00000412218 ABCC12Q96J65 1359 aa13.26□□□□□ -0.29
LINC01643-201ENST00000412218 NMRK2Q9NPI5 230 aa13.26□□□□□ -0.29
LINC01643-201ENST00000412218 RIC1Q4ADV7 1423 aa13.25□□□□□ -0.29
LINC01643-201ENST00000412218 NPR1P16066 1061 aa13.25□□□□□ -0.29
LINC01643-201ENST00000412218 KRT24Q2M2I5 525 aa13.25□□□□□ -0.29
LINC01643-201ENST00000412218 NYXQ9GZU5 481 aa13.25□□□□□ -0.29
LINC01643-201ENST00000412218 ZNF219Q9P2Y4 722 aaPredicted RBP13.25□□□□□ -0.29
LINC01643-201ENST00000412218 LAS1LQ9Y4W2 734 aaKnown RBP13.25□□□□□ -0.29
LINC01643-201ENST00000412218 TIAM2Q8IVF5 1701 aa13.25□□□□□ -0.29
LINC01643-201ENST00000412218 KDM2BQ8NHM5 1336 aa13.24□□□□□ -0.29
LINC01643-201ENST00000412218 LTBP3Q9NS15 1303 aa13.24□□□□□ -0.29
LINC01643-201ENST00000412218 APAF1O14727 1248 aa13.24□□□□□ -0.29
LINC01643-201ENST00000412218 ANXA1P04083 346 aa13.24□□□□□ -0.29
LINC01643-201ENST00000412218 GIGYF2Q6Y7W6 1299 aaKnown RBP13.24□□□□□ -0.29
LINC01643-201ENST00000412218 ZNF34Q8IZ26 560 aa13.24□□□□□ -0.29
LINC01643-201ENST00000412218 CFAP44Q96MT7 982 aa13.24□□□□□ -0.29
LINC01643-201ENST00000412218 SBF1O95248 1867 aa13.24□□□□□ -0.29
LINC01643-201ENST00000412218 HOXB7P09629 217 aa13.23□□□□□ -0.29
LINC01643-201ENST00000412218 GPTP24298 496 aa13.23□□□□□ -0.29
LINC01643-201ENST00000412218 GTF2E1P29083 439 aaPredicted RBP13.23□□□□□ -0.29
LINC01643-201ENST00000412218 CRY2Q49AN0 593 aa13.23□□□□□ -0.29
LINC01643-201ENST00000412218 ERFEQ4G0M1 354 aa13.23□□□□□ -0.29
LINC01643-201ENST00000412218 CCDC184Q52MB2 194 aa13.23□□□□□ -0.29
LINC01643-201ENST00000412218 SOGA3Q5TF21 947 aa13.23□□□□□ -0.29
LINC01643-201ENST00000412218 SUSD4Q5VX71 490 aa13.23□□□□□ -0.29
LINC01643-201ENST00000412218 NUTM1Q86Y26 1132 aa13.23□□□□□ -0.29
LINC01643-201ENST00000412218 C7orf43Q8WVR3 580 aa13.23□□□□□ -0.29
LINC01643-201ENST00000412218 NECTIN2Q92692 538 aa13.23□□□□□ -0.29
LINC01643-201ENST00000412218 TAOK3Q9H2K8 898 aa13.23□□□□□ -0.29
LINC01643-201ENST00000412218 GTF3C3Q9Y5Q9 886 aa13.23□□□□□ -0.29
LINC01643-201ENST00000412218 NUP98P52948 1817 aa13.23□□□□□ -0.29
LINC01643-201ENST00000412218 SLX4Q8IY92 1834 aa13.23□□□□□ -0.29
LINC01643-201ENST00000412218 TOMM70O94826 608 aa13.22□□□□□ -0.29
LINC01643-201ENST00000412218 NTSR2O95665 410 aa13.22□□□□□ -0.29
LINC01643-201ENST00000412218 ZNF853P0CG23 659 aa13.22□□□□□ -0.29
LINC01643-201ENST00000412218 DDX21Q9NR30 783 aaKnown RBP eCLIP13.22□□□□□ -0.29
LINC01643-201ENST00000412218 MBIPQ9NS73 344 aa13.22□□□□□ -0.29
LINC01643-201ENST00000412218 FER1L6Q2WGJ9 1857 aa13.22□□□□□ -0.29
LINC01643-201ENST00000412218 HSPA6P17066 643 aa13.21□□□□□ -0.29
LINC01643-201ENST00000412218 PARP10Q53GL7 1025 aa13.21□□□□□ -0.29
LINC01643-201ENST00000412218 HDGFL1Q5TGJ6 251 aa13.21□□□□□ -0.29
LINC01643-201ENST00000412218 COPS6Q7L5N1 327 aa13.21□□□□□ -0.29
LINC01643-201ENST00000412218 XAGE3Q8WTP9 111 aa13.21□□□□□ -0.29
LINC01643-201ENST00000412218 IFT57Q9NWB7 429 aa13.21□□□□□ -0.29
LINC01643-201ENST00000412218 CHPF2Q9P2E5 772 aa13.21□□□□□ -0.29
LINC01643-201ENST00000412218 GLTPD2A6NH11 291 aa13.2□□□□□ -0.3
LINC01643-201ENST00000412218 CALD1Q05682 793 aaKnown RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms