RNA–Protein interactions for RNA: ENST00000412141.1

LINC00963-201, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best)

Gene LINC00963, Length 739 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-201ENST00000412141 NECTIN2Q92692 538 aa15.24■□□□□ 0.03
LINC00963-201ENST00000412141 PRKRIP1Q9H875 184 aaPredicted RBP15.24■□□□□ 0.03
LINC00963-201ENST00000412141 NIP7Q9Y221 180 aaKnown RBP eCLIP15.24■□□□□ 0.03
LINC00963-201ENST00000412141 ZNF652Q9Y2D9 606 aa15.24■□□□□ 0.03
LINC00963-201ENST00000412141 BRCA1P38398 1863 aaKnown RBP15.23■□□□□ 0.03
LINC00963-201ENST00000412141 TTLL7Q6ZT98 887 aa15.23■□□□□ 0.03
LINC00963-201ENST00000412141 SCN7AQ01118 1682 aa15.22■□□□□ 0.03
LINC00963-201ENST00000412141 C21orf2O43822 256 aa15.22■□□□□ 0.03
LINC00963-201ENST00000412141 HSPA6P17066 643 aa15.22■□□□□ 0.03
LINC00963-201ENST00000412141 CLEC4GQ6UXB4 293 aa15.22■□□□□ 0.03
LINC00963-201ENST00000412141 RUNDC1Q96C34 613 aa15.22■□□□□ 0.03
LINC00963-201ENST00000412141 NMRK2Q9NPI5 230 aa15.22■□□□□ 0.03
LINC00963-201ENST00000412141 NRXN2Q9P2S2 1712 aa15.21■□□□□ 0.03
LINC00963-201ENST00000412141 ANXA1P04083 346 aa15.21■□□□□ 0.03
LINC00963-201ENST00000412141 GTF2E1P29083 439 aaPredicted RBP15.21■□□□□ 0.03
LINC00963-201ENST00000412141 LMOD3Q0VAK6 560 aa15.21■□□□□ 0.03
LINC00963-201ENST00000412141 ZBTB3Q9H5J0 574 aa15.21■□□□□ 0.03
LINC00963-201ENST00000412141 GPTP24298 496 aa15.2■□□□□ 0.02
LINC00963-201ENST00000412141 KIF6Q6ZMV9 814 aa15.2■□□□□ 0.02
LINC00963-201ENST00000412141 ARFGEF1Q9Y6D6 1849 aa15.2■□□□□ 0.02
LINC00963-201ENST00000412141 KRT24Q2M2I5 525 aa15.19■□□□□ 0.02
LINC00963-201ENST00000412141 TPTE2Q6XPS3 522 aa15.19■□□□□ 0.02
LINC00963-201ENST00000412141 TRIM35Q9UPQ4 493 aa15.19■□□□□ 0.02
LINC00963-201ENST00000412141 KDM3BQ7LBC6 1761 aa15.19■□□□□ 0.02
LINC00963-201ENST00000412141 NFKBIEO00221 500 aa15.18■□□□□ 0.02
LINC00963-201ENST00000412141 SRGNP10124 158 aa15.18■□□□□ 0.02
LINC00963-201ENST00000412141 ZEB1P37275 1124 aaPredicted RBP15.18■□□□□ 0.02
LINC00963-201ENST00000412141 PRELPP51888 382 aa15.18■□□□□ 0.02
LINC00963-201ENST00000412141 PROSER3Q2NL68 480 aa15.18■□□□□ 0.02
LINC00963-201ENST00000412141 NUTM1Q86Y26 1132 aa15.18■□□□□ 0.02
LINC00963-201ENST00000412141 ANKRD31Q8N7Z5 1873 aa15.18■□□□□ 0.02
LINC00963-201ENST00000412141 MAP3K15Q6ZN16 1313 aa15.17■□□□□ 0.02
LINC00963-201ENST00000412141 LMNB1P20700 586 aa15.17■□□□□ 0.02
LINC00963-201ENST00000412141 AIMP1Q12904 312 aaKnown RBP15.17■□□□□ 0.02
LINC00963-201ENST00000412141 PRPF40BQ6NWY9 871 aaKnown RBP15.17■□□□□ 0.02
LINC00963-201ENST00000412141 CNKSR1Q969H4 720 aa15.17■□□□□ 0.02
LINC00963-201ENST00000412141 MASTLQ96GX5 879 aa15.17■□□□□ 0.02
LINC00963-201ENST00000412141 PDZRN3Q9UPQ7 1066 aa15.17■□□□□ 0.02
LINC00963-201ENST00000412141 BCORQ6W2J9 1755 aa15.16■□□□□ 0.02
LINC00963-201ENST00000412141 ERVV-1B6SEH8 477 aa15.16■□□□□ 0.02
LINC00963-201ENST00000412141 STYK1Q6J9G0 422 aa15.16■□□□□ 0.02
LINC00963-201ENST00000412141 RRAGCQ9HB90 399 aa15.16■□□□□ 0.02
LINC00963-201ENST00000412141 CHL1O00533 1208 aa15.15■□□□□ 0.02
LINC00963-201ENST00000412141 APAF1O14727 1248 aa15.15■□□□□ 0.02
LINC00963-201ENST00000412141 TOMM70O94826 608 aa15.15■□□□□ 0.02
LINC00963-201ENST00000412141 PDIA6Q15084 440 aa15.15■□□□□ 0.02
LINC00963-201ENST00000412141 ERFEQ4G0M1 354 aa15.15■□□□□ 0.02
LINC00963-201ENST00000412141 CCDC184Q52MB2 194 aa15.15■□□□□ 0.02
LINC00963-201ENST00000412141 ZNF428Q96B54 188 aa15.15■□□□□ 0.02
LINC00963-201ENST00000412141 KDM2BQ8NHM5 1336 aa15.15■□□□□ 0.02
LINC00963-201ENST00000412141 LAMB4A4D0S4 1761 aa15.14■□□□□ 0.01
LINC00963-201ENST00000412141 NPR1P16066 1061 aa15.14■□□□□ 0.01
LINC00963-201ENST00000412141 OLFM4Q6UX06 510 aa15.14■□□□□ 0.01
LINC00963-201ENST00000412141 C16orf71Q8IYS4 520 aaPredicted RBP15.14■□□□□ 0.01
LINC00963-201ENST00000412141 BABAM1Q9NWV8 329 aa15.14■□□□□ 0.01
LINC00963-201ENST00000412141 COL11A2P13942 1736 aaPredicted RBP15.14■□□□□ 0.01
LINC00963-201ENST00000412141 SUSD4Q5VX71 490 aa15.13■□□□□ 0.01
LINC00963-201ENST00000412141 COPS6Q7L5N1 327 aa15.13■□□□□ 0.01
LINC00963-201ENST00000412141 XAGE3Q8WTP9 111 aa15.13■□□□□ 0.01
LINC00963-201ENST00000412141 NYXQ9GZU5 481 aa15.13■□□□□ 0.01
LINC00963-201ENST00000412141 DLEC1Q9Y238 1755 aa15.13■□□□□ 0.01
LINC00963-201ENST00000412141 UBN2Q6ZU65 1347 aa15.13■□□□□ 0.01
LINC00963-201ENST00000412141 ABCC12Q96J65 1359 aa15.12■□□□□ 0.01
LINC00963-201ENST00000412141 ZNF316A6NFI3 1004 aaPredicted RBP15.12■□□□□ 0.01
LINC00963-201ENST00000412141 TCERG1O14776 1098 aaKnown RBP15.12■□□□□ 0.01
LINC00963-201ENST00000412141 RGL2O15211 777 aa15.12■□□□□ 0.01
LINC00963-201ENST00000412141 GIGYF2Q6Y7W6 1299 aaKnown RBP15.12■□□□□ 0.01
LINC00963-201ENST00000412141 TAOK3Q9H2K8 898 aa15.12■□□□□ 0.01
LINC00963-201ENST00000412141 SLX4Q8IY92 1834 aa15.12■□□□□ 0.01
LINC00963-201ENST00000412141 ERBB4Q15303 1308 aa15.12■□□□□ 0.01
LINC00963-201ENST00000412141 SBF1O95248 1867 aa15.12■□□□□ 0.01
LINC00963-201ENST00000412141 ELL2O00472 640 aaPredicted RBP15.11■□□□□ 0.01
LINC00963-201ENST00000412141 IFFO2Q5TF58 517 aa15.11■□□□□ 0.01
LINC00963-201ENST00000412141 HDGFL1Q5TGJ6 251 aa15.11■□□□□ 0.01
LINC00963-201ENST00000412141 LRP10Q7Z4F1 713 aa15.11■□□□□ 0.01
LINC00963-201ENST00000412141 ZNF34Q8IZ26 560 aa15.11■□□□□ 0.01
LINC00963-201ENST00000412141 CHPF2Q9P2E5 772 aa15.11■□□□□ 0.01
LINC00963-201ENST00000412141 KLRG2A4D1S0 409 aaPredicted RBP15.1■□□□□ 0.01
LINC00963-201ENST00000412141 APLP1P51693 650 aa15.1■□□□□ 0.01
LINC00963-201ENST00000412141 MBIPQ9NS73 344 aa15.1■□□□□ 0.01
LINC00963-201ENST00000412141 CACNA1SQ13698 1873 aa15.1■□□□□ 0.01
LINC00963-201ENST00000412141 GLTPD2A6NH11 291 aa15.09■□□□□ 0.01
LINC00963-201ENST00000412141 DUSP27Q5VZP5 1158 aa15.09■□□□□ 0.01
LINC00963-201ENST00000412141 C3orf67Q6ZVT6 689 aa15.09■□□□□ 0.01
LINC00963-201ENST00000412141 C7orf43Q8WVR3 580 aa15.09■□□□□ 0.01
LINC00963-201ENST00000412141 RPGRQ92834 1020 aaKnown RBP15.09■□□□□ 0.01
LINC00963-201ENST00000412141 CFAP44Q96MT7 982 aa15.09■□□□□ 0.01
LINC00963-201ENST00000412141 DDX21Q9NR30 783 aaKnown RBP eCLIP15.09■□□□□ 0.01
LINC00963-201ENST00000412141 NUP98P52948 1817 aa15.08■□□□□ 0.01
LINC00963-201ENST00000412141 CCDC88AQ3V6T2 1871 aa15.08■□□□□ 0.01
LINC00963-201ENST00000412141 NTSR2O95665 410 aa15.08■□□□□ 0
LINC00963-201ENST00000412141 ALDH1B1P30837 517 aa15.08■□□□□ 0
LINC00963-201ENST00000412141 CCDC93Q567U6 631 aa15.08■□□□□ 0
LINC00963-201ENST00000412141 SOGA3Q5TF21 947 aa15.08■□□□□ 0
LINC00963-201ENST00000412141 DPY19L2Q6NUT2 758 aa15.08■□□□□ 0
LINC00963-201ENST00000412141 PPP1R42Q7Z4L9 355 aa15.08■□□□□ 0
LINC00963-201ENST00000412141 SLC51AQ86UW1 340 aa15.08■□□□□ 0
LINC00963-201ENST00000412141 SYNE4Q8N205 404 aa15.08■□□□□ 0
LINC00963-201ENST00000412141 RBM46Q8TBY0 533 aaKnown RBP15.08■□□□□ 0
LINC00963-201ENST00000412141 UTP14AQ9BVJ6 771 aaKnown RBP15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms