RNA–Protein interactions for RNA: ENST00000411739.6

NEDD1-202, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 2 BASIC

Gene NEDD1, Length 2,490 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-202ENST00000411739 SERPINB2P05120 415 aa15.51■□□□□ 0.07
NEDD1-202ENST00000411739 NCBP3Q53F19 620 aaKnown RBP15.51■□□□□ 0.07
NEDD1-202ENST00000411739 COPS6Q7L5N1 327 aa15.51■□□□□ 0.07
NEDD1-202ENST00000411739 XAGE3Q8WTP9 111 aa15.51■□□□□ 0.07
NEDD1-202ENST00000411739 IL16Q14005 1332 aa15.51■□□□□ 0.07
NEDD1-202ENST00000411739 CD2APQ9Y5K6 639 aa15.5■□□□□ 0.07
NEDD1-202ENST00000411739 EXOSC9Q06265 439 aaKnown RBP15.5■□□□□ 0.07
NEDD1-202ENST00000411739 KIF6Q6ZMV9 814 aa15.5■□□□□ 0.07
NEDD1-202ENST00000411739 DDX21Q9NR30 783 aaKnown RBP eCLIP15.5■□□□□ 0.07
NEDD1-202ENST00000411739 A0A0G2JLW4 131 aa15.49■□□□□ 0.07
NEDD1-202ENST00000411739 SETDB2Q96T68 719 aa15.49■□□□□ 0.07
NEDD1-202ENST00000411739 ZNF521Q96K83 1311 aa15.49■□□□□ 0.07
NEDD1-202ENST00000411739 GPTP24298 496 aa15.49■□□□□ 0.07
NEDD1-202ENST00000411739 CDCA7LQ96GN5 454 aa15.49■□□□□ 0.07
NEDD1-202ENST00000411739 ERBB4Q15303 1308 aa15.48■□□□□ 0.07
NEDD1-202ENST00000411739 MAP3K15Q6ZN16 1313 aa15.48■□□□□ 0.07
NEDD1-202ENST00000411739 HOXB7P09629 217 aa15.48■□□□□ 0.07
NEDD1-202ENST00000411739 TWISTNBQ3B726 338 aaPredicted RBP15.48■□□□□ 0.07
NEDD1-202ENST00000411739 PHAXQ9H814 394 aaKnown RBP15.48■□□□□ 0.07
NEDD1-202ENST00000411739 NIP7Q9Y221 180 aaKnown RBP eCLIP15.48■□□□□ 0.07
NEDD1-202ENST00000411739 GOLGA2Q08379 1002 aa15.48■□□□□ 0.07
NEDD1-202ENST00000411739 SCN7AQ01118 1682 aa15.47■□□□□ 0.07
NEDD1-202ENST00000411739 DBF4Q9UBU7 674 aaPredicted RBP15.47■□□□□ 0.07
NEDD1-202ENST00000411739 CARMIL3Q8ND23 1372 aa15.47■□□□□ 0.07
NEDD1-202ENST00000411739 CHRNA5P30532 468 aa15.46■□□□□ 0.07
NEDD1-202ENST00000411739 GPR162Q16538 588 aa15.46■□□□□ 0.07
NEDD1-202ENST00000411739 ZNF652Q9Y2D9 606 aa15.46■□□□□ 0.07
NEDD1-202ENST00000411739 NPHP1O15259 732 aa15.46■□□□□ 0.07
NEDD1-202ENST00000411739 DPEP1P16444 411 aa15.46■□□□□ 0.07
NEDD1-202ENST00000411739 CLEC4GQ6UXB4 293 aa15.46■□□□□ 0.07
NEDD1-202ENST00000411739 BCORQ6W2J9 1755 aa15.45■□□□□ 0.06
NEDD1-202ENST00000411739 C10orf71Q711Q0 1435 aa15.45■□□□□ 0.06
NEDD1-202ENST00000411739 ERVV-1B6SEH8 477 aa15.45■□□□□ 0.06
NEDD1-202ENST00000411739 PRR5LQ6MZQ0 368 aa15.45■□□□□ 0.06
NEDD1-202ENST00000411739 MYH16Q9H6N6 1097 aa15.45■□□□□ 0.06
NEDD1-202ENST00000411739 AFDNP55196 1824 aaKnown RBP15.45■□□□□ 0.06
NEDD1-202ENST00000411739 YBX3P16989 372 aaKnown RBP eCLIP15.44■□□□□ 0.063e-8■□□□□ 10.5
NEDD1-202ENST00000411739 CCDC30Q5VVM6 783 aa15.44■□□□□ 0.06
NEDD1-202ENST00000411739 NBPF5PQ86XG9 351 aaPredicted RBP15.44■□□□□ 0.06
NEDD1-202ENST00000411739 VAMP4O75379 141 aa15.44■□□□□ 0.06
NEDD1-202ENST00000411739 HYPKQ9NX55 129 aa15.44■□□□□ 0.06
NEDD1-202ENST00000411739 N4BP2Q86UW6 1770 aaPredicted RBP15.43■□□□□ 0.06
NEDD1-202ENST00000411739 HNRNPUQ00839 825 aaKnown RBP eCLIP15.43■□□□□ 0.06
NEDD1-202ENST00000411739 GIGYF2Q6Y7W6 1299 aaKnown RBP15.43■□□□□ 0.06
NEDD1-202ENST00000411739 NUTM1Q86Y26 1132 aa15.43■□□□□ 0.06
NEDD1-202ENST00000411739 UBN2Q6ZU65 1347 aa15.43■□□□□ 0.06
NEDD1-202ENST00000411739 PXDNLA1KZ92 1463 aa15.43■□□□□ 0.06
NEDD1-202ENST00000411739 G2E3Q7L622 706 aa15.43■□□□□ 0.06
NEDD1-202ENST00000411739 CNBD1Q8NA66 436 aa15.43■□□□□ 0.06
NEDD1-202ENST00000411739 DCAF8L1A6NGE4 600 aa15.42■□□□□ 0.06
NEDD1-202ENST00000411739 KCNA3P22001 575 aa15.42■□□□□ 0.06
NEDD1-202ENST00000411739 SUSD4Q5VX71 490 aa15.42■□□□□ 0.06
NEDD1-202ENST00000411739 ANKRD13DQ6ZTN6 518 aa15.42■□□□□ 0.06
NEDD1-202ENST00000411739 SLC4A2P04920 1241 aa15.42■□□□□ 0.06
NEDD1-202ENST00000411739 TGFB2P61812 414 aa15.42■□□□□ 0.06
NEDD1-202ENST00000411739 SLFN5Q08AF3 891 aa15.42■□□□□ 0.06
NEDD1-202ENST00000411739 NUP98P52948 1817 aa15.42■□□□□ 0.06
NEDD1-202ENST00000411739 ATP5J2-PTCD1G3V325 749 aa15.41■□□□□ 0.06
NEDD1-202ENST00000411739 ZNF34Q8IZ26 560 aa15.41■□□□□ 0.06
NEDD1-202ENST00000411739 GTF2E1P29083 439 aaPredicted RBP15.41■□□□□ 0.06
NEDD1-202ENST00000411739 STK31Q9BXU1 1019 aa15.41■□□□□ 0.06
NEDD1-202ENST00000411739 BCS1LQ9Y276 419 aa15.41■□□□□ 0.06
NEDD1-202ENST00000411739 E9PSI1 815 aa15.4■□□□□ 0.06
NEDD1-202ENST00000411739 RIC3Q7Z5B4 369 aa15.4■□□□□ 0.06
NEDD1-202ENST00000411739 C2CD5Q86YS7 1000 aa15.4■□□□□ 0.06
NEDD1-202ENST00000411739 PLBD2Q8NHP8 589 aa15.4■□□□□ 0.06
NEDD1-202ENST00000411739 ERFEQ4G0M1 354 aa15.4■□□□□ 0.06
NEDD1-202ENST00000411739 TPTE2Q6XPS3 522 aa15.4■□□□□ 0.06
NEDD1-202ENST00000411739 SYNE4Q8N205 404 aa15.4■□□□□ 0.06
NEDD1-202ENST00000411739 ST5P78524 1137 aa15.39■□□□□ 0.05
NEDD1-202ENST00000411739 TCIRG1Q13488 830 aa15.39■□□□□ 0.05
NEDD1-202ENST00000411739 NRXN2Q9P2S2 1712 aa15.39■□□□□ 0.05
NEDD1-202ENST00000411739 KIF13BQ9NQT8 1826 aa15.39■□□□□ 0.05
NEDD1-202ENST00000411739 KIAA1551Q9HCM1 1747 aa15.39■□□□□ 0.05
NEDD1-202ENST00000411739 BRIP1Q9BX63 1249 aa15.38■□□□□ 0.05
NEDD1-202ENST00000411739 ATP10DQ9P241 1426 aa15.38■□□□□ 0.05
NEDD1-202ENST00000411739 RTL5Q5HYW3 569 aaPredicted RBP15.38■□□□□ 0.05
NEDD1-202ENST00000411739 ZNF622Q969S3 477 aaKnown RBP eCLIP15.38■□□□□ 0.05
NEDD1-202ENST00000411739 RGL2O15211 777 aa15.37■□□□□ 0.05
NEDD1-202ENST00000411739 NLRP10Q86W26 655 aa15.37■□□□□ 0.05
NEDD1-202ENST00000411739 MYD88Q99836 296 aa15.37■□□□□ 0.05
NEDD1-202ENST00000411739 PIM2Q9P1W9 311 aa15.37■□□□□ 0.05
NEDD1-202ENST00000411739 ZNF219Q9P2Y4 722 aaPredicted RBP15.37■□□□□ 0.05
NEDD1-202ENST00000411739 ABCC12Q96J65 1359 aa15.37■□□□□ 0.05
NEDD1-202ENST00000411739 PI4KAP2A4QPH2 592 aa15.37■□□□□ 0.05
NEDD1-202ENST00000411739 H0YIN7 160 aa15.37■□□□□ 0.05
NEDD1-202ENST00000411739 NTSR2O95665 410 aa15.37■□□□□ 0.05
NEDD1-202ENST00000411739 PI4KAP1Q8N8J0 262 aa15.37■□□□□ 0.05
NEDD1-202ENST00000411739 JARID2Q92833 1246 aaPredicted RBP15.37■□□□□ 0.05
NEDD1-202ENST00000411739 MAP3K2Q9Y2U5 619 aa15.37■□□□□ 0.05
NEDD1-202ENST00000411739 ANKRD31Q8N7Z5 1873 aa15.36■□□□□ 0.05
NEDD1-202ENST00000411739 PDE6BP35913 854 aa15.36■□□□□ 0.05
NEDD1-202ENST00000411739 HSP90AB3PQ58FF7 597 aa15.36■□□□□ 0.05
NEDD1-202ENST00000411739 UTP14AQ9BVJ6 771 aaKnown RBP15.36■□□□□ 0.05
NEDD1-202ENST00000411739 BCL2L13Q9BXK5 485 aa15.36■□□□□ 0.05
NEDD1-202ENST00000411739 FLIIQ13045 1269 aa15.35■□□□□ 0.05
NEDD1-202ENST00000411739 DALRD3Q5D0E6 543 aaKnown RBP15.35■□□□□ 0.05
NEDD1-202ENST00000411739 C3orf67Q6ZVT6 689 aa15.35■□□□□ 0.05
NEDD1-202ENST00000411739 PPP1R42Q7Z4L9 355 aa15.35■□□□□ 0.05
NEDD1-202ENST00000411739 TRMT2AQ8IZ69 625 aaKnown RBP15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms