RNA–Protein interactions for RNA: ENST00000409823.7

PMS1-204, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 2,795 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-204ENST00000409823 AK7Q96M32 723 aa15.94■□□□□ 0.14
PMS1-204ENST00000409823 MS4A1P11836 297 aa15.94■□□□□ 0.14
PMS1-204ENST00000409823 MYD88Q99836 296 aa15.94■□□□□ 0.14
PMS1-204ENST00000409823 HLFQ16534 295 aa15.93■□□□□ 0.14
PMS1-204ENST00000409823 KIF6Q6ZMV9 814 aa15.93■□□□□ 0.14
PMS1-204ENST00000409823 CNTNAP4Q9C0A0 1308 aa15.93■□□□□ 0.14
PMS1-204ENST00000409823 TNS1Q9HBL0 1735 aaKnown RBP15.93■□□□□ 0.14
PMS1-204ENST00000409823 PLBD2Q8NHP8 589 aa15.92■□□□□ 0.14
PMS1-204ENST00000409823 CAMKK2Q96RR4 588 aa15.92■□□□□ 0.14
PMS1-204ENST00000409823 RTCBQ9Y3I0 505 aaKnown RBP15.92■□□□□ 0.14
PMS1-204ENST00000409823 C1orf115Q9H7X2 142 aa15.92■□□□□ 0.14
PMS1-204ENST00000409823 COL5A3P25940 1745 aaPredicted RBP15.92■□□□□ 0.14
PMS1-204ENST00000409823 COL15A1P39059 1388 aa15.92■□□□□ 0.14
PMS1-204ENST00000409823 ZNF827Q17R98 1081 aa15.92■□□□□ 0.14
PMS1-204ENST00000409823 BEND3Q5T5X7 828 aa15.92■□□□□ 0.14
PMS1-204ENST00000409823 INTS3Q68E01 1043 aaKnown RBP15.92■□□□□ 0.14
PMS1-204ENST00000409823 CACNA1FO60840 1977 aa15.91■□□□□ 0.14
PMS1-204ENST00000409823 BAG6P46379 1132 aa15.91■□□□□ 0.14
PMS1-204ENST00000409823 JARID2Q92833 1246 aaPredicted RBP15.91■□□□□ 0.14
PMS1-204ENST00000409823 RPS6KA4O75676 772 aa15.91■□□□□ 0.14
PMS1-204ENST00000409823 IGKV5-2P06315 115 aa15.91■□□□□ 0.14
PMS1-204ENST00000409823 RTL5Q5HYW3 569 aaPredicted RBP15.91■□□□□ 0.14
PMS1-204ENST00000409823 RC3H1Q5TC82 1133 aaKnown RBP15.91■□□□□ 0.14
PMS1-204ENST00000409823 MEIS3Q99687 375 aa15.91■□□□□ 0.14
PMS1-204ENST00000409823 SRCIN1Q9C0H9 1055 aa15.91■□□□□ 0.14
PMS1-204ENST00000409823 SRP68Q9UHB9 627 aaKnown RBP15.91■□□□□ 0.14
PMS1-204ENST00000409823 GPTP24298 496 aa15.9■□□□□ 0.14
PMS1-204ENST00000409823 CCT4P50991 539 aaKnown RBP15.9■□□□□ 0.14
PMS1-204ENST00000409823 ILDR2Q71H61 639 aa15.9■□□□□ 0.14
PMS1-204ENST00000409823 ARHGEF1Q92888 912 aaKnown RBP15.9■□□□□ 0.14
PMS1-204ENST00000409823 METTL22Q9BUU2 404 aaPredicted RBP15.9■□□□□ 0.14
PMS1-204ENST00000409823 TFCP2L1Q9NZI6 479 aa15.9■□□□□ 0.14
PMS1-204ENST00000409823 DDX19BQ9UMR2 479 aa15.9■□□□□ 0.14
PMS1-204ENST00000409823 MAP3K15Q6ZN16 1313 aa15.9■□□□□ 0.14
PMS1-204ENST00000409823 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.9■□□□□ 0.14
PMS1-204ENST00000409823 C4BP0C0L5 1744 aa15.9■□□□□ 0.14
PMS1-204ENST00000409823 ZBTB7BO15156 539 aaPredicted RBP15.89■□□□□ 0.13
PMS1-204ENST00000409823 NEXNQ0ZGT2 675 aa15.89■□□□□ 0.13
PMS1-204ENST00000409823 TAF1LQ8IZX4 1826 aa15.89■□□□□ 0.13
PMS1-204ENST00000409823 TRAPPC3LQ5T215 181 aa15.88■□□□□ 0.13
PMS1-204ENST00000409823 ANO8Q9HCE9 1232 aaPredicted RBP15.88■□□□□ 0.13
PMS1-204ENST00000409823 ZNF831Q5JPB2 1677 aa15.88■□□□□ 0.13
PMS1-204ENST00000409823 USPL1Q5W0Q7 1092 aa15.88■□□□□ 0.13
PMS1-204ENST00000409823 B4GALNT3Q6L9W6 998 aa15.88■□□□□ 0.13
PMS1-204ENST00000409823 FAM177BA6PVY3 158 aa15.87■□□□□ 0.13
PMS1-204ENST00000409823 MSH5O43196 834 aa15.87■□□□□ 0.13
PMS1-204ENST00000409823 CAMTA2O94983 1202 aa15.87■□□□□ 0.13
PMS1-204ENST00000409823 NBPF7P0C2Y1 421 aaPredicted RBP15.87■□□□□ 0.13
PMS1-204ENST00000409823 RFC4P35249 363 aa15.87■□□□□ 0.13
PMS1-204ENST00000409823 LINS1Q8NG48 757 aa15.87■□□□□ 0.13
PMS1-204ENST00000409823 CICQ96RK0 1608 aaPredicted RBP15.87■□□□□ 0.13
PMS1-204ENST00000409823 NEURL1BA8MQ27 555 aa15.87■□□□□ 0.13
PMS1-204ENST00000409823 BICDL1Q6ZP65 573 aa15.87■□□□□ 0.13
PMS1-204ENST00000409823 USP44Q9H0E7 712 aa15.87■□□□□ 0.13
PMS1-204ENST00000409823 GIGYF2Q6Y7W6 1299 aaKnown RBP15.87■□□□□ 0.13
PMS1-204ENST00000409823 ZBTB40Q9NUA8 1239 aa15.87■□□□□ 0.13
PMS1-204ENST00000409823 ZPR1O75312 459 aa15.86■□□□□ 0.13
PMS1-204ENST00000409823 UPF1Q92900 1129 aaKnown RBP eCLIP15.86■□□□□ 0.13
PMS1-204ENST00000409823 C9orf78Q9NZ63 289 aaPredicted RBP15.86■□□□□ 0.13
PMS1-204ENST00000409823 TCIRG1Q13488 830 aa15.86■□□□□ 0.13
PMS1-204ENST00000409823 AKT1S1Q96B36 256 aa15.86■□□□□ 0.13
PMS1-204ENST00000409823 PCDHB15Q9Y5E8 787 aa15.85■□□□□ 0.13
PMS1-204ENST00000409823 GCKRQ14397 625 aa15.85■□□□□ 0.13
PMS1-204ENST00000409823 RREB1Q92766 1687 aa15.84■□□□□ 0.13
PMS1-204ENST00000409823 ERVV-1B6SEH8 477 aa15.84■□□□□ 0.13
PMS1-204ENST00000409823 ARFGEF2Q9Y6D5 1785 aa15.84■□□□□ 0.13
PMS1-204ENST00000409823 A0A087WZG4 1122 aa15.84■□□□□ 0.13
PMS1-204ENST00000409823 BCL2L12Q9HB09 334 aa15.84■□□□□ 0.13
PMS1-204ENST00000409823 NARFQ9UHQ1 456 aa15.84■□□□□ 0.13
PMS1-204ENST00000409823 ATP10DQ9P241 1426 aa15.84■□□□□ 0.13
PMS1-204ENST00000409823 UBE3BQ7Z3V4 1068 aa15.83■□□□□ 0.13
PMS1-204ENST00000409823 CCDC125Q86Z20 511 aa15.83■□□□□ 0.13
PMS1-204ENST00000409823 SYNE4Q8N205 404 aa15.83■□□□□ 0.13
PMS1-204ENST00000409823 NIP7Q9Y221 180 aaKnown RBP eCLIP15.83■□□□□ 0.13
PMS1-204ENST00000409823 UTRNP46939 3433 aa15.83■□□□□ 0.12
PMS1-204ENST00000409823 PXDNLA1KZ92 1463 aa15.83■□□□□ 0.12
PMS1-204ENST00000409823 UBTFL1P0CB47 393 aaPredicted RBP15.83■□□□□ 0.12
PMS1-204ENST00000409823 COL23A1Q86Y22 540 aaPredicted RBP15.83■□□□□ 0.12
PMS1-204ENST00000409823 CCDC136Q96JN2 1154 aa15.83■□□□□ 0.12
PMS1-204ENST00000409823 UBN2Q6ZU65 1347 aa15.83■□□□□ 0.12
PMS1-204ENST00000409823 GRM8O00222 908 aa15.82■□□□□ 0.12
PMS1-204ENST00000409823 ALDH1L1O75891 902 aa15.82■□□□□ 0.12
PMS1-204ENST00000409823 SSFA2P28290 1259 aa15.82■□□□□ 0.12
PMS1-204ENST00000409823 TBC1D9BQ66K14 1250 aa15.82■□□□□ 0.12
PMS1-204ENST00000409823 FAM89AQ96GI7 184 aa15.82■□□□□ 0.12
PMS1-204ENST00000409823 PDGFDQ9GZP0 370 aaPredicted RBP15.82■□□□□ 0.12
PMS1-204ENST00000409823 CWC25Q9NXE8 425 aaPredicted RBP15.82■□□□□ 0.12
PMS1-204ENST00000409823 LRRFIP2Q9Y608 721 aaKnown RBP15.82■□□□□ 0.12
PMS1-204ENST00000409823 SLC15A2Q16348 729 aa15.82■□□□□ 0.12
PMS1-204ENST00000409823 ISCA1Q9BUE6 129 aa15.82■□□□□ 0.12
PMS1-204ENST00000409823 PPP4R2Q9NY27 417 aa15.82■□□□□ 0.12
PMS1-204ENST00000409823 USP42Q9H9J4 1324 aaKnown RBP15.82■□□□□ 0.12
PMS1-204ENST00000409823 NUP188Q5SRE5 1749 aa15.82■□□□□ 0.12
PMS1-204ENST00000409823 NLRP10Q86W26 655 aa15.81■□□□□ 0.12
PMS1-204ENST00000409823 STK32BQ9NY57 414 aa15.81■□□□□ 0.12
PMS1-204ENST00000409823 ZNF652Q9Y2D9 606 aa15.81■□□□□ 0.12
PMS1-204ENST00000409823 PNPLA7Q6ZV29 1317 aa15.81■□□□□ 0.12
PMS1-204ENST00000409823 CCDC191Q8NCU4 936 aa15.81■□□□□ 0.12
PMS1-204ENST00000409823 GNAI3P08754 354 aa15.8■□□□□ 0.12
PMS1-204ENST00000409823 ADRA2BP18089 450 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms