RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 MX2P20592 715 aa8.12□□□□□ -1.11
PMS1-203ENST00000409593 MBIPQ9NS73 344 aa8.12□□□□□ -1.11
PMS1-203ENST00000409593 KHNYNO15037 678 aaKnown RBP8.11□□□□□ -1.11
PMS1-203ENST00000409593 BNIP3LO60238 219 aa8.11□□□□□ -1.11
PMS1-203ENST00000409593 FAM69CQ0P6D2 419 aa8.11□□□□□ -1.11
PMS1-203ENST00000409593 C1orf53Q5VUE5 145 aa8.11□□□□□ -1.11
PMS1-203ENST00000409593 KLRG1Q96E93 195 aa8.11□□□□□ -1.11
PMS1-203ENST00000409593 HSH2DQ96JZ2 352 aa8.11□□□□□ -1.11
PMS1-203ENST00000409593 ATXN7L1Q9ULK2 861 aaPredicted RBP8.11□□□□□ -1.11
PMS1-203ENST00000409593 PCDHGC4Q9Y5F7 938 aa8.11□□□□□ -1.11
PMS1-203ENST00000409593 FKBP5Q13451 457 aaPredicted RBP8.11□□□□□ -1.11
PMS1-203ENST00000409593 CFHR5Q9BXR6 569 aa8.11□□□□□ -1.11
PMS1-203ENST00000409593 ADAMTS2O95450 1211 aa8.1□□□□□ -1.11
PMS1-203ENST00000409593 ZSCAN1Q8NBB4 408 aa8.1□□□□□ -1.11
PMS1-203ENST00000409593 GPC6Q9Y625 555 aaPredicted RBP8.1□□□□□ -1.11
PMS1-203ENST00000409593 IGF1RP08069 1367 aa8.1□□□□□ -1.11
PMS1-203ENST00000409593 FGFR3P22607 806 aa8.09□□□□□ -1.11
PMS1-203ENST00000409593 SRSF11Q05519 484 aaKnown RBP8.09□□□□□ -1.11
PMS1-203ENST00000409593 MKNK1Q9BUB5 465 aa8.09□□□□□ -1.11
PMS1-203ENST00000409593 NDFIP2Q9NV92 336 aa8.09□□□□□ -1.11
PMS1-203ENST00000409593 NSFL1CQ9UNZ2 370 aaKnown RBP8.09□□□□□ -1.11
PMS1-203ENST00000409593 MAPTP10636 758 aaKnown RBP8.08□□□□□ -1.12
PMS1-203ENST00000409593 OCLNQ16625 522 aa8.08□□□□□ -1.12
PMS1-203ENST00000409593 RTN1Q16799 776 aa8.08□□□□□ -1.12
PMS1-203ENST00000409593 CLP1Q92989 425 aaKnown RBP8.08□□□□□ -1.12
PMS1-203ENST00000409593 SUSD3Q96L08 255 aa8.08□□□□□ -1.12
PMS1-203ENST00000409593 ANKIB1Q9P2G1 1089 aa8.08□□□□□ -1.12
PMS1-203ENST00000409593 FAM157BP0CG42 384 aa8.08□□□□□ -1.12
PMS1-203ENST00000409593 ZNF280CQ8ND82 737 aa8.08□□□□□ -1.12
PMS1-203ENST00000409593 C7orf43Q8WVR3 580 aa8.08□□□□□ -1.12
PMS1-203ENST00000409593 CXXC1Q9P0U4 656 aaPredicted RBP8.08□□□□□ -1.12
PMS1-203ENST00000409593 BMP4P12644 408 aa8.07□□□□□ -1.12
PMS1-203ENST00000409593 CD33P20138 364 aa8.07□□□□□ -1.12
PMS1-203ENST00000409593 TNP2Q05952 138 aa8.07□□□□□ -1.12
PMS1-203ENST00000409593 SAMD5Q5TGI4 173 aa8.07□□□□□ -1.12
PMS1-203ENST00000409593 CEP63Q96MT8 703 aa8.07□□□□□ -1.12
PMS1-203ENST00000409593 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.07□□□□□ -1.12
PMS1-203ENST00000409593 ATP2B4P23634 1241 aa8.06□□□□□ -1.12
PMS1-203ENST00000409593 CTBSQ01459 385 aa8.06□□□□□ -1.12
PMS1-203ENST00000409593 HIF1AQ16665 826 aa8.06□□□□□ -1.12
PMS1-203ENST00000409593 SVOPQ8N4V2 548 aa8.06□□□□□ -1.12
PMS1-203ENST00000409593 QTRT2Q9H974 415 aaKnown RBP8.06□□□□□ -1.12
PMS1-203ENST00000409593 KLK14Q9P0G3 267 aa8.06□□□□□ -1.12
PMS1-203ENST00000409593 CARNS1A5YM72 827 aa8.05□□□□□ -1.12
PMS1-203ENST00000409593 FAM181BA6NEQ2 426 aa8.05□□□□□ -1.12
PMS1-203ENST00000409593 SLURP2P0DP57 97 aa8.05□□□□□ -1.12
PMS1-203ENST00000409593 LORP23490 312 aaPredicted RBP8.05□□□□□ -1.12
PMS1-203ENST00000409593 DGKZQ13574 1117 aa8.05□□□□□ -1.12
PMS1-203ENST00000409593 SLAIN2Q9P270 581 aa8.05□□□□□ -1.12
PMS1-203ENST00000409593 TMEM88BA6NKF7 163 aa8.05□□□□□ -1.12
PMS1-203ENST00000409593 MAP2K3P46734 347 aa8.05□□□□□ -1.12
PMS1-203ENST00000409593 WHAMMQ8TF30 809 aa8.05□□□□□ -1.12
PMS1-203ENST00000409593 BRD7Q9NPI1 651 aa8.05□□□□□ -1.12
PMS1-203ENST00000409593 STRN4Q9NRL3 753 aa8.04□□□□□ -1.12
PMS1-203ENST00000409593 MARK1Q9P0L2 795 aa8.04□□□□□ -1.12
PMS1-203ENST00000409593 C2CD2LO14523 706 aa8.03□□□□□ -1.12
PMS1-203ENST00000409593 EFSO43281 561 aa8.03□□□□□ -1.12
PMS1-203ENST00000409593 TYRO3Q06418 890 aa8.03□□□□□ -1.12
PMS1-203ENST00000409593 NAA30Q147X3 362 aaPredicted RBP8.03□□□□□ -1.12
PMS1-203ENST00000409593 ZNF385CQ66K41 422 aaPredicted RBP8.03□□□□□ -1.12
PMS1-203ENST00000409593 CAPN12Q6ZSI9 719 aa8.03□□□□□ -1.12
PMS1-203ENST00000409593 BTLAQ7Z6A9 289 aa8.03□□□□□ -1.12
PMS1-203ENST00000409593 HCN2Q9UL51 889 aa8.03□□□□□ -1.12
PMS1-203ENST00000409593 TGFBR3LH3BV60 316 aa8.02□□□□□ -1.13
PMS1-203ENST00000409593 MAP3K10Q02779 954 aa8.02□□□□□ -1.13
PMS1-203ENST00000409593 LYPD4Q6UWN0 246 aa8.02□□□□□ -1.13
PMS1-203ENST00000409593 MYO19Q96H55 970 aa8.02□□□□□ -1.13
PMS1-203ENST00000409593 OXCT2Q9BYC2 517 aaPredicted RBP8.02□□□□□ -1.13
PMS1-203ENST00000409593 PTCD1O75127 700 aaKnown RBP8.02□□□□□ -1.13
PMS1-203ENST00000409593 SFSWAPQ12872 951 aaKnown RBP8.02□□□□□ -1.13
PMS1-203ENST00000409593 LAMC2Q13753 1193 aa8.02□□□□□ -1.13
PMS1-203ENST00000409593 ACDQ96AP0 544 aa8.02□□□□□ -1.13
PMS1-203ENST00000409593 LRFN2Q9ULH4 789 aa8.02□□□□□ -1.13
PMS1-203ENST00000409593 PRR12Q9ULL5 1215 aa8.02□□□□□ -1.13
PMS1-203ENST00000409593 BCS1LQ9Y276 419 aa8.02□□□□□ -1.13
PMS1-203ENST00000409593 CELA2BP08218 269 aaPredicted RBP8.01□□□□□ -1.13
PMS1-203ENST00000409593 C11orf91Q3C1V1 193 aa8.01□□□□□ -1.13
PMS1-203ENST00000409593 COX20Q5RI15 118 aa8.01□□□□□ -1.13
PMS1-203ENST00000409593 C16orf46Q6P387 395 aa8.01□□□□□ -1.13
PMS1-203ENST00000409593 SAP130Q9H0E3 1048 aa8.01□□□□□ -1.13
PMS1-203ENST00000409593 GRIN2CQ14957 1233 aa8□□□□□ -1.13
PMS1-203ENST00000409593 FAM182BQ5T319 152 aa8□□□□□ -1.13
PMS1-203ENST00000409593 IER5Q5VY09 327 aa8□□□□□ -1.13
PMS1-203ENST00000409593 COL26A1Q96A83 441 aa8□□□□□ -1.13
PMS1-203ENST00000409593 USTQ9Y2C2 406 aa8□□□□□ -1.13
PMS1-203ENST00000409593 SCNN1AP37088 669 aa7.99□□□□□ -1.13
PMS1-203ENST00000409593 IDH3AP50213 366 aa7.99□□□□□ -1.13
PMS1-203ENST00000409593 RETREG2Q8NC44 543 aa7.99□□□□□ -1.13
PMS1-203ENST00000409593 IFT43Q96FT9 208 aa7.99□□□□□ -1.13
PMS1-203ENST00000409593 GGA1Q9UJY5 639 aa7.99□□□□□ -1.13
PMS1-203ENST00000409593 KCNH4Q9UQ05 1017 aa7.99□□□□□ -1.13
PMS1-203ENST00000409593 BCRP11274 1271 aa7.98□□□□□ -1.13
PMS1-203ENST00000409593 RAB44Q7Z6P3 723 aaPredicted RBP7.98□□□□□ -1.13
PMS1-203ENST00000409593 GOLGA6L1Q8N7Z2 621 aa7.98□□□□□ -1.13
PMS1-203ENST00000409593 SEPT3Q9UH03 358 aa7.98□□□□□ -1.13
PMS1-203ENST00000409593 GDF2Q9UK05 429 aaPredicted RBP7.98□□□□□ -1.13
PMS1-203ENST00000409593 NEURL1BA8MQ27 555 aa7.98□□□□□ -1.13
PMS1-203ENST00000409593 ARAFP10398 606 aa7.98□□□□□ -1.13
PMS1-203ENST00000409593 PCBP4P57723 403 aaKnown RBP7.98□□□□□ -1.13
PMS1-203ENST00000409593 SPEM2Q0P670 501 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms