RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 PRAMEF22A3QJZ6 481 aa19.08■□□□□ 0.64
NIF3L1-205ENST00000409588 CHRNA5P30532 468 aa19.08■□□□□ 0.64
NIF3L1-205ENST00000409588 C1QTNF8P60827 252 aa19.08■□□□□ 0.64
NIF3L1-205ENST00000409588 TTLL6Q8N841 843 aa19.08■□□□□ 0.64
NIF3L1-205ENST00000409588 NRXN2Q9P2S2 1712 aa19.08■□□□□ 0.64
NIF3L1-205ENST00000409588 ERBB4Q15303 1308 aa19.07■□□□□ 0.64
NIF3L1-205ENST00000409588 NBPF26B4DH59 902 aa19.07■□□□□ 0.64
NIF3L1-205ENST00000409588 ERVV-1B6SEH8 477 aa19.07■□□□□ 0.64
NIF3L1-205ENST00000409588 NBPF10Q6P3W6 841 aaKnown RBP19.07■□□□□ 0.64
NIF3L1-205ENST00000409588 NBPF15Q8N660 670 aa19.07■□□□□ 0.64
NIF3L1-205ENST00000409588 ATP10DQ9P241 1426 aa19.07■□□□□ 0.64
NIF3L1-205ENST00000409588 NPHP1O15259 732 aa19.06■□□□□ 0.64
NIF3L1-205ENST00000409588 ATXN8OSP0DMR3 200 aa19.06■□□□□ 0.64
NIF3L1-205ENST00000409588 ST5P78524 1137 aa19.06■□□□□ 0.64
NIF3L1-205ENST00000409588 TPTE2Q6XPS3 522 aa19.06■□□□□ 0.64
NIF3L1-205ENST00000409588 C2CD5Q86YS7 1000 aa19.06■□□□□ 0.64
NIF3L1-205ENST00000409588 CNBD1Q8NA66 436 aa19.06■□□□□ 0.64
NIF3L1-205ENST00000409588 SP7Q8TDD2 431 aaPredicted RBP19.06■□□□□ 0.64
NIF3L1-205ENST00000409588 TSPYL4Q9UJ04 414 aa19.06■□□□□ 0.64
NIF3L1-205ENST00000409588 DLG5Q8TDM6 1919 aa19.06■□□□□ 0.64
NIF3L1-205ENST00000409588 PITPNM1O00562 1244 aa19.05■□□□□ 0.64
NIF3L1-205ENST00000409588 PRR5LQ6MZQ0 368 aa19.05■□□□□ 0.64
NIF3L1-205ENST00000409588 ADAMTS8Q9UP79 889 aa19.05■□□□□ 0.64
NIF3L1-205ENST00000409588 BRCA1P38398 1863 aaKnown RBP19.04■□□□□ 0.64
NIF3L1-205ENST00000409588 THUMPD2Q9BTF0 503 aaKnown RBP19.04■□□□□ 0.64
NIF3L1-205ENST00000409588 AFDNP55196 1824 aaKnown RBP19.03■□□□□ 0.64
NIF3L1-205ENST00000409588 ARFGEF1Q9Y6D6 1849 aa19.03■□□□□ 0.64
NIF3L1-205ENST00000409588 NBPF5PQ86XG9 351 aaPredicted RBP19.03■□□□□ 0.64
NIF3L1-205ENST00000409588 CNKSR1Q969H4 720 aa19.02■□□□□ 0.64
NIF3L1-205ENST00000409588 SCN7AQ01118 1682 aa19.01■□□□□ 0.63
NIF3L1-205ENST00000409588 ZC3H4Q9UPT8 1303 aaKnown RBP19.01■□□□□ 0.63
NIF3L1-205ENST00000409588 CHL1O00533 1208 aa19.01■□□□□ 0.63
NIF3L1-205ENST00000409588 PIP4K2AP48426 406 aaPredicted RBP19.01■□□□□ 0.63
NIF3L1-205ENST00000409588 STYK1Q6J9G0 422 aa19.01■□□□□ 0.63
NIF3L1-205ENST00000409588 KIF6Q6ZMV9 814 aa19.01■□□□□ 0.63
NIF3L1-205ENST00000409588 NIP7Q9Y221 180 aaKnown RBP eCLIP19.01■□□□□ 0.63
NIF3L1-205ENST00000409588 RRP7AQ9Y3A4 280 aaKnown RBP19.01■□□□□ 0.63
NIF3L1-205ENST00000409588 KDM3BQ7LBC6 1761 aa19.01■□□□□ 0.63
NIF3L1-205ENST00000409588 KLRG2A4D1S0 409 aaPredicted RBP19■□□□□ 0.63
NIF3L1-205ENST00000409588 NEUROD2Q15784 382 aa19■□□□□ 0.63
NIF3L1-205ENST00000409588 SOGA3Q5TF21 947 aa19■□□□□ 0.63
NIF3L1-205ENST00000409588 C9orf131Q5VYM1 1079 aa19■□□□□ 0.63
NIF3L1-205ENST00000409588 CCDC146Q8IYE0 955 aa19■□□□□ 0.63
NIF3L1-205ENST00000409588 MASTLQ96GX5 879 aa19■□□□□ 0.63
NIF3L1-205ENST00000409588 NYXQ9GZU5 481 aa19■□□□□ 0.63
NIF3L1-205ENST00000409588 CALD1Q05682 793 aaKnown RBP18.99■□□□□ 0.63
NIF3L1-205ENST00000409588 ZNF622Q969S3 477 aaKnown RBP eCLIP18.99■□□□□ 0.63
NIF3L1-205ENST00000409588 TRIM35Q9UPQ4 493 aa18.99■□□□□ 0.63
NIF3L1-205ENST00000409588 MAP3K15Q6ZN16 1313 aa18.99■□□□□ 0.63
NIF3L1-205ENST00000409588 SRGNP10124 158 aa18.98■□□□□ 0.63
NIF3L1-205ENST00000409588 GTF2E1P29083 439 aaPredicted RBP18.98■□□□□ 0.63
NIF3L1-205ENST00000409588 HOXB7P09629 217 aa18.97■□□□□ 0.63
NIF3L1-205ENST00000409588 LMNB1P20700 586 aa18.97■□□□□ 0.63
NIF3L1-205ENST00000409588 CFAP44Q96MT7 982 aa18.97■□□□□ 0.63
NIF3L1-205ENST00000409588 KDM2BQ8NHM5 1336 aa18.97■□□□□ 0.63
NIF3L1-205ENST00000409588 LAMB4A4D0S4 1761 aa18.96■□□□□ 0.63
NIF3L1-205ENST00000409588 BCORQ6W2J9 1755 aa18.96■□□□□ 0.63
NIF3L1-205ENST00000409588 MYL6BP14649 208 aa18.96■□□□□ 0.63
NIF3L1-205ENST00000409588 NPR1P16066 1061 aa18.96■□□□□ 0.63
NIF3L1-205ENST00000409588 HLFQ16534 295 aa18.96■□□□□ 0.63
NIF3L1-205ENST00000409588 NGEFQ8N5V2 710 aa18.96■□□□□ 0.63
NIF3L1-205ENST00000409588 ZNF526Q8TF50 670 aaPredicted RBP18.96■□□□□ 0.63
NIF3L1-205ENST00000409588 CHMP4AQ9BY43 222 aa18.96■□□□□ 0.63
NIF3L1-205ENST00000409588 RNF181Q9P0P0 153 aa18.96■□□□□ 0.63
NIF3L1-205ENST00000409588 ZNF316A6NFI3 1004 aaPredicted RBP18.95■□□□□ 0.62
NIF3L1-205ENST00000409588 ALDH1B1P30837 517 aa18.95■□□□□ 0.62
NIF3L1-205ENST00000409588 FXR2P51116 673 aaKnown RBP eCLIP18.95■□□□□ 0.62
NIF3L1-205ENST00000409588 GIGYF2Q6Y7W6 1299 aaKnown RBP18.95■□□□□ 0.62
NIF3L1-205ENST00000409588 DLEC1Q9Y238 1755 aa18.94■□□□□ 0.62
NIF3L1-205ENST00000409588 EIF2S2P20042 333 aaKnown RBP18.94■□□□□ 0.62
NIF3L1-205ENST00000409588 TOMM70O94826 608 aa18.93■□□□□ 0.62
NIF3L1-205ENST00000409588 PDIA6Q15084 440 aa18.93■□□□□ 0.62
NIF3L1-205ENST00000409588 PARP10Q53GL7 1025 aa18.93■□□□□ 0.62
NIF3L1-205ENST00000409588 TTLL7Q6ZT98 887 aa18.93■□□□□ 0.62
NIF3L1-205ENST00000409588 PPP1R42Q7Z4L9 355 aa18.93■□□□□ 0.62
NIF3L1-205ENST00000409588 ZNF34Q8IZ26 560 aa18.93■□□□□ 0.62
NIF3L1-205ENST00000409588 IBTKQ9P2D0 1353 aaPredicted RBP18.93■□□□□ 0.62
NIF3L1-205ENST00000409588 KIF3CO14782 793 aa18.92■□□□□ 0.62
NIF3L1-205ENST00000409588 HSP90AB3PQ58FF7 597 aa18.92■□□□□ 0.62
NIF3L1-205ENST00000409588 CCDC24Q8N4L8 307 aa18.92■□□□□ 0.62
NIF3L1-205ENST00000409588 DDX21Q9NR30 783 aaKnown RBP eCLIP18.92■□□□□ 0.62
NIF3L1-205ENST00000409588 LAS1LQ9Y4W2 734 aaKnown RBP18.92■□□□□ 0.62
NIF3L1-205ENST00000409588 LTBP3Q9NS15 1303 aa18.92■□□□□ 0.62
NIF3L1-205ENST00000409588 SENP3-EIF4A1A0A087X0R7 540 aa18.91■□□□□ 0.62
NIF3L1-205ENST00000409588 APAF1O14727 1248 aa18.91■□□□□ 0.62
NIF3L1-205ENST00000409588 C21orf2O43822 256 aa18.91■□□□□ 0.62
NIF3L1-205ENST00000409588 GNAI1P63096 354 aa18.91■□□□□ 0.62
NIF3L1-205ENST00000409588 GRIPAP1Q4V328 841 aa18.91■□□□□ 0.62
NIF3L1-205ENST00000409588 LRP10Q7Z4F1 713 aa18.91■□□□□ 0.62
NIF3L1-205ENST00000409588 DPY19L2Q6NUT2 758 aa18.9■□□□□ 0.62
NIF3L1-205ENST00000409588 PRPF40BQ6NWY9 871 aaKnown RBP18.9■□□□□ 0.62
NIF3L1-205ENST00000409588 ZBTB3Q9H5J0 574 aa18.9■□□□□ 0.62
NIF3L1-205ENST00000409588 IFT57Q9NWB7 429 aa18.9■□□□□ 0.62
NIF3L1-205ENST00000409588 DBF4Q9UBU7 674 aaPredicted RBP18.9■□□□□ 0.62
NIF3L1-205ENST00000409588 RNF123Q5XPI4 1314 aa18.9■□□□□ 0.62
NIF3L1-205ENST00000409588 ANKRD31Q8N7Z5 1873 aa18.9■□□□□ 0.62
NIF3L1-205ENST00000409588 ANP32CO43423 234 aa18.89■□□□□ 0.61
NIF3L1-205ENST00000409588 ZNF853P0CG23 659 aa18.89■□□□□ 0.61
NIF3L1-205ENST00000409588 CRY2Q49AN0 593 aa18.89■□□□□ 0.61
NIF3L1-205ENST00000409588 CC2D2BQ6DHV5 1058 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms