RNA–Protein interactions for RNA: ENST00000409076.6

SNX13-201, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-201ENST00000409076 NCOA5Q9HCD5 579 aaKnown RBP9.91□□□□□ -0.82
SNX13-201ENST00000409076 GLI2P10070 1586 aa9.91□□□□□ -0.82
SNX13-201ENST00000409076 PPRC1Q5VV67 1664 aaKnown RBP9.91□□□□□ -0.82
SNX13-201ENST00000409076 F13A1P00488 732 aa9.91□□□□□ -0.82
SNX13-201ENST00000409076 TTLL5Q6EMB2 1281 aa9.91□□□□□ -0.82
SNX13-201ENST00000409076 BLOC1S2Q6QNY1 142 aa9.91□□□□□ -0.82
SNX13-201ENST00000409076 CLASP1Q7Z460 1538 aa9.91□□□□□ -0.82
SNX13-201ENST00000409076 GNL2Q13823 731 aaKnown RBP9.91□□□□□ -0.82
SNX13-201ENST00000409076 CABLES1Q8TDN4 633 aa9.91□□□□□ -0.82
SNX13-201ENST00000409076 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.91□□□□□ -0.82
SNX13-201ENST00000409076 ISY1Q9ULR0 285 aaKnown RBP9.91□□□□□ -0.82
SNX13-201ENST00000409076 FAM135BQ49AJ0 1406 aa9.9□□□□□ -0.82
SNX13-201ENST00000409076 LTKP29376 864 aa9.9□□□□□ -0.82
SNX13-201ENST00000409076 ARID5BQ14865 1188 aa9.9□□□□□ -0.82
SNX13-201ENST00000409076 LARP1Q6PKG0 1096 aaKnown RBP9.9□□□□□ -0.82
SNX13-201ENST00000409076 KIF1BPQ96EK5 621 aa9.9□□□□□ -0.82
SNX13-201ENST00000409076 SBNO2Q9Y2G9 1366 aa9.9□□□□□ -0.82
SNX13-201ENST00000409076 PTPRCP08575 1304 aa9.9□□□□□ -0.82
SNX13-201ENST00000409076 POLR3DP05423 398 aaPredicted RBP9.9□□□□□ -0.82
SNX13-201ENST00000409076 RXRAP19793 462 aa9.9□□□□□ -0.82
SNX13-201ENST00000409076 FKBP4Q02790 459 aaKnown RBP eCLIP9.9□□□□□ -0.82
SNX13-201ENST00000409076 CHRNA2Q15822 529 aa9.9□□□□□ -0.82
SNX13-201ENST00000409076 WASHC4Q2M389 1173 aa9.9□□□□□ -0.82
SNX13-201ENST00000409076 ME1P48163 572 aa9.9□□□□□ -0.83
SNX13-201ENST00000409076 HDGFP51858 240 aaKnown RBP9.9□□□□□ -0.83
SNX13-201ENST00000409076 ME3Q16798 604 aa9.9□□□□□ -0.83
SNX13-201ENST00000409076 SMC2O95347 1197 aa9.89□□□□□ -0.83
SNX13-201ENST00000409076 APPP05067 770 aa9.89□□□□□ -0.83
SNX13-201ENST00000409076 RUFY2Q8WXA3 655 aa9.89□□□□□ -0.83
SNX13-201ENST00000409076 BRF1Q92994 677 aa9.89□□□□□ -0.83
SNX13-201ENST00000409076 KIF3AQ9Y496 699 aa9.89□□□□□ -0.83
SNX13-201ENST00000409076 TET3O43151 1660 aa9.89□□□□□ -0.83
SNX13-201ENST00000409076 SHPRHQ149N8 1683 aa9.89□□□□□ -0.83
SNX13-201ENST00000409076 CCDC192P0DO97 292 aa9.89□□□□□ -0.83
SNX13-201ENST00000409076 KRT85P78386 507 aa9.89□□□□□ -0.83
SNX13-201ENST00000409076 PDCL2Q8N4E4 241 aa9.89□□□□□ -0.83
SNX13-201ENST00000409076 SDF4Q9BRK5 362 aa9.89□□□□□ -0.83
SNX13-201ENST00000409076 RIOK3O14730 519 aaKnown RBP9.89□□□□□ -0.83
SNX13-201ENST00000409076 UBE3BQ7Z3V4 1068 aa9.89□□□□□ -0.83
SNX13-201ENST00000409076 CAMSAP1Q5T5Y3 1602 aa9.89□□□□□ -0.83
SNX13-201ENST00000409076 MYOM2P54296 1465 aa9.89□□□□□ -0.83
SNX13-201ENST00000409076 EFCAB6Q5THR3 1501 aa9.89□□□□□ -0.83
SNX13-201ENST00000409076 MTMR7Q9Y216 660 aa9.88□□□□□ -0.83
SNX13-201ENST00000409076 ATP6V1DQ9Y5K8 247 aa9.88□□□□□ -0.83
SNX13-201ENST00000409076 A0A0D9SFI3 127 aa9.88□□□□□ -0.83
SNX13-201ENST00000409076 MAP3K11Q16584 847 aa9.88□□□□□ -0.83
SNX13-201ENST00000409076 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.88□□□□□ -0.83
SNX13-201ENST00000409076 MCM2P49736 904 aa9.88□□□□□ -0.83
SNX13-201ENST00000409076 NBPF6Q5VWK0 638 aa9.88□□□□□ -0.83
SNX13-201ENST00000409076 PIBF1Q8WXW3 757 aa9.88□□□□□ -0.83
SNX13-201ENST00000409076 NBPF4Q96M43 638 aa9.88□□□□□ -0.83
SNX13-201ENST00000409076 BICC1Q9H694 974 aaKnown RBP9.88□□□□□ -0.83
SNX13-201ENST00000409076 TPCN1Q9ULQ1 816 aa9.88□□□□□ -0.83
SNX13-201ENST00000409076 GOLGA6L6A8MZA4 724 aa9.87□□□□□ -0.83
SNX13-201ENST00000409076 TTC6Q86TZ1 520 aa9.87□□□□□ -0.83
SNX13-201ENST00000409076 GOLIM4O00461 696 aa9.87□□□□□ -0.83
SNX13-201ENST00000409076 TAF7LQ5H9L4 462 aa9.87□□□□□ -0.83
SNX13-201ENST00000409076 HOMER1Q86YM7 354 aa9.87□□□□□ -0.83
SNX13-201ENST00000409076 GJB4Q9NTQ9 266 aa9.87□□□□□ -0.83
SNX13-201ENST00000409076 USP16Q9Y5T5 823 aa9.87□□□□□ -0.83
SNX13-201ENST00000409076 SGSM2O43147 1006 aa9.87□□□□□ -0.83
SNX13-201ENST00000409076 TNNT1P13805 278 aa9.87□□□□□ -0.83
SNX13-201ENST00000409076 UBE2HP62256 183 aa9.87□□□□□ -0.83
SNX13-201ENST00000409076 ZBTB3Q9H5J0 574 aa9.87□□□□□ -0.83
SNX13-201ENST00000409076 ECHDC1Q9NTX5 307 aa9.87□□□□□ -0.83
SNX13-201ENST00000409076 CLIP2Q9UDT6 1046 aa9.87□□□□□ -0.83
SNX13-201ENST00000409076 APOBRQ0VD83 1088 aa9.86□□□□□ -0.83
SNX13-201ENST00000409076 CREB3L3Q68CJ9 461 aa9.86□□□□□ -0.83
SNX13-201ENST00000409076 ZNF589Q86UQ0 364 aaPredicted RBP9.86□□□□□ -0.83
SNX13-201ENST00000409076 ABCC3O15438 1527 aa9.86□□□□□ -0.83
SNX13-201ENST00000409076 GLRX3O76003 335 aaKnown RBP9.86□□□□□ -0.83
SNX13-201ENST00000409076 KCNA6P17658 529 aa9.86□□□□□ -0.83
SNX13-201ENST00000409076 ZNF165P49910 485 aa9.86□□□□□ -0.83
SNX13-201ENST00000409076 TYRO3Q06418 890 aa9.86□□□□□ -0.83
SNX13-201ENST00000409076 GOLGA8FQ08AF8 430 aa9.86□□□□□ -0.83
SNX13-201ENST00000409076 GOLGA8DPQ0D2H9 430 aa9.86□□□□□ -0.83
SNX13-201ENST00000409076 NEXNQ0ZGT2 675 aa9.86□□□□□ -0.83
SNX13-201ENST00000409076 SUCLG2Q96I99 432 aa9.86□□□□□ -0.83
SNX13-201ENST00000409076 BCL2L12Q9HB09 334 aa9.86□□□□□ -0.83
SNX13-201ENST00000409076 AP5Z1O43299 807 aa9.86□□□□□ -0.83
SNX13-201ENST00000409076 CYP2E1P05181 493 aaPredicted RBP9.86□□□□□ -0.83
SNX13-201ENST00000409076 TIMM10P62072 90 aa9.86□□□□□ -0.83
SNX13-201ENST00000409076 ZNF594Q96JF6 807 aaPredicted RBP9.86□□□□□ -0.83
SNX13-201ENST00000409076 ZSWIM4Q9H7M6 989 aa9.86□□□□□ -0.83
SNX13-201ENST00000409076 HOXC9P31274 260 aa9.85□□□□□ -0.83
SNX13-201ENST00000409076 SLC4A8Q2Y0W8 1093 aa9.85□□□□□ -0.83
SNX13-201ENST00000409076 Q6ZUG5 572 aa9.85□□□□□ -0.83
SNX13-201ENST00000409076 PDILTQ8N807 584 aa9.85□□□□□ -0.83
SNX13-201ENST00000409076 EAF2Q96CJ1 260 aaPredicted RBP9.85□□□□□ -0.83
SNX13-201ENST00000409076 CPS1P31327 1500 aa9.85□□□□□ -0.83
SNX13-201ENST00000409076 ATP10DQ9P241 1426 aa9.85□□□□□ -0.83
SNX13-201ENST00000409076 ROBO2Q9HCK4 1378 aa9.85□□□□□ -0.83
SNX13-201ENST00000409076 NR1I2O75469 434 aa9.85□□□□□ -0.83
SNX13-201ENST00000409076 RRP12Q5JTH9 1297 aaKnown RBP9.85□□□□□ -0.83
SNX13-201ENST00000409076 GPHNQ9NQX3 736 aaPredicted RBP9.85□□□□□ -0.83
SNX13-201ENST00000409076 LAMC1P11047 1609 aa9.85□□□□□ -0.83
SNX13-201ENST00000409076 UHRF1BP1LA0JNW5 1464 aa9.85□□□□□ -0.83
SNX13-201ENST00000409076 PTCH1Q13635 1447 aa9.85□□□□□ -0.83
SNX13-201ENST00000409076 A0A0G2JLW4 131 aa9.85□□□□□ -0.83
SNX13-201ENST00000409076 HSPA4P34932 840 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms