RNA–Protein interactions for RNA: ENST00000409022.2

PTPN18-203, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-203ENST00000409022 NGEFQ8N5V2 710 aa24.18■■□□□ 1.46
PTPN18-203ENST00000409022 NIP7Q9Y221 180 aaKnown RBP eCLIP24.18■■□□□ 1.46
PTPN18-203ENST00000409022 ANP32CO43423 234 aa24.17■■□□□ 1.46
PTPN18-203ENST00000409022 MYL6BP14649 208 aa24.17■■□□□ 1.46
PTPN18-203ENST00000409022 TRIM35Q9UPQ4 493 aa24.16■■□□□ 1.46
PTPN18-203ENST00000409022 LAS1LQ9Y4W2 734 aaKnown RBP24.16■■□□□ 1.46
PTPN18-203ENST00000409022 LAMB4A4D0S4 1761 aa24.16■■□□□ 1.46
PTPN18-203ENST00000409022 CHL1O00533 1208 aa24.15■■□□□ 1.46
PTPN18-203ENST00000409022 EIF2S2P20042 333 aaKnown RBP24.15■■□□□ 1.46
PTPN18-203ENST00000409022 ZNF622Q969S3 477 aaKnown RBP eCLIP24.15■■□□□ 1.46
PTPN18-203ENST00000409022 MAP3K15Q6ZN16 1313 aa24.14■■□□□ 1.46
PTPN18-203ENST00000409022 GTF2E1P29083 439 aaPredicted RBP24.14■■□□□ 1.45
PTPN18-203ENST00000409022 AFDNP55196 1824 aaKnown RBP24.14■■□□□ 1.45
PTPN18-203ENST00000409022 NYXQ9GZU5 481 aa24.13■■□□□ 1.45
PTPN18-203ENST00000409022 BCORQ6W2J9 1755 aa24.12■■□□□ 1.45
PTPN18-203ENST00000409022 C1QTNF8P60827 252 aa24.12■■□□□ 1.45
PTPN18-203ENST00000409022 ZNF526Q8TF50 670 aaPredicted RBP24.12■■□□□ 1.45
PTPN18-203ENST00000409022 CNKSR1Q969H4 720 aa24.12■■□□□ 1.45
PTPN18-203ENST00000409022 CFAP44Q96MT7 982 aa24.12■■□□□ 1.45
PTPN18-203ENST00000409022 BRCA1P38398 1863 aaKnown RBP24.11■■□□□ 1.45
PTPN18-203ENST00000409022 APAF1O14727 1248 aa24.11■■□□□ 1.45
PTPN18-203ENST00000409022 HLFQ16534 295 aa24.11■■□□□ 1.45
PTPN18-203ENST00000409022 C9orf131Q5VYM1 1079 aa24.11■■□□□ 1.45
PTPN18-203ENST00000409022 STYK1Q6J9G0 422 aa24.11■■□□□ 1.45
PTPN18-203ENST00000409022 CCDC24Q8N4L8 307 aa24.11■■□□□ 1.45
PTPN18-203ENST00000409022 HOXB7P09629 217 aa24.1■■□□□ 1.45
PTPN18-203ENST00000409022 MASTLQ96GX5 879 aa24.1■■□□□ 1.45
PTPN18-203ENST00000409022 TTLL7Q6ZT98 887 aa24.09■■□□□ 1.45
PTPN18-203ENST00000409022 ZBTB3Q9H5J0 574 aa24.09■■□□□ 1.45
PTPN18-203ENST00000409022 RNF181Q9P0P0 153 aa24.09■■□□□ 1.45
PTPN18-203ENST00000409022 ARFGEF1Q9Y6D6 1849 aa24.09■■□□□ 1.45
PTPN18-203ENST00000409022 FAM177BA6PVY3 158 aa24.08■■□□□ 1.45
PTPN18-203ENST00000409022 SRGNP10124 158 aa24.08■■□□□ 1.45
PTPN18-203ENST00000409022 SOGA3Q5TF21 947 aa24.08■■□□□ 1.45
PTPN18-203ENST00000409022 GNAI1P63096 354 aa24.07■■□□□ 1.44
PTPN18-203ENST00000409022 IFT57Q9NWB7 429 aa24.07■■□□□ 1.44
PTPN18-203ENST00000409022 NPR1P16066 1061 aa24.06■■□□□ 1.44
PTPN18-203ENST00000409022 LMNB1P20700 586 aa24.06■■□□□ 1.44
PTPN18-203ENST00000409022 HSP90AB3PQ58FF7 597 aa24.06■■□□□ 1.44
PTPN18-203ENST00000409022 GIGYF2Q6Y7W6 1299 aaKnown RBP24.06■■□□□ 1.44
PTPN18-203ENST00000409022 CHMP4AQ9BY43 222 aa24.06■■□□□ 1.44
PTPN18-203ENST00000409022 MRS2Q9HD23 443 aa24.06■■□□□ 1.44
PTPN18-203ENST00000409022 PDIA6Q15084 440 aa24.05■■□□□ 1.44
PTPN18-203ENST00000409022 PARP10Q53GL7 1025 aa24.05■■□□□ 1.44
PTPN18-203ENST00000409022 HDGFL1Q5TGJ6 251 aa24.05■■□□□ 1.44
PTPN18-203ENST00000409022 DDX21Q9NR30 783 aaKnown RBP eCLIP24.05■■□□□ 1.44
PTPN18-203ENST00000409022 ZC3H4Q9UPT8 1303 aaKnown RBP24.05■■□□□ 1.44
PTPN18-203ENST00000409022 IBTKQ9P2D0 1353 aaPredicted RBP24.04■■□□□ 1.44
PTPN18-203ENST00000409022 PPP1R42Q7Z4L9 355 aa24.04■■□□□ 1.44
PTPN18-203ENST00000409022 NECTIN2Q92692 538 aa24.04■■□□□ 1.44
PTPN18-203ENST00000409022 KDM2BQ8NHM5 1336 aa24.04■■□□□ 1.44
PTPN18-203ENST00000409022 KLRG2A4D1S0 409 aaPredicted RBP24.03■■□□□ 1.44
PTPN18-203ENST00000409022 C21orf2O43822 256 aa24.03■■□□□ 1.44
PTPN18-203ENST00000409022 GPTP24298 496 aa24.03■■□□□ 1.44
PTPN18-203ENST00000409022 MBIPQ9NS73 344 aa24.03■■□□□ 1.44
PTPN18-203ENST00000409022 DLEC1Q9Y238 1755 aa24.03■■□□□ 1.44
PTPN18-203ENST00000409022 ALDH1B1P30837 517 aa24.02■■□□□ 1.44
PTPN18-203ENST00000409022 PRPF40BQ6NWY9 871 aaKnown RBP24.02■■□□□ 1.44
PTPN18-203ENST00000409022 COPS6Q7L5N1 327 aa24.02■■□□□ 1.44
PTPN18-203ENST00000409022 DBF4Q9UBU7 674 aaPredicted RBP24.02■■□□□ 1.44
PTPN18-203ENST00000409022 RASSF7Q02833 373 aa24.01■■□□□ 1.43
PTPN18-203ENST00000409022 AIMP1Q12904 312 aaKnown RBP24.01■■□□□ 1.43
PTPN18-203ENST00000409022 DUSP27Q5VZP5 1158 aa24.01■■□□□ 1.43
PTPN18-203ENST00000409022 LRP10Q7Z4F1 713 aa24.01■■□□□ 1.43
PTPN18-203ENST00000409022 ZNF34Q8IZ26 560 aa24.01■■□□□ 1.43
PTPN18-203ENST00000409022 ZNF219Q9P2Y4 722 aaPredicted RBP24.01■■□□□ 1.43
PTPN18-203ENST00000409022 ANXA1P04083 346 aa24■■□□□ 1.43
PTPN18-203ENST00000409022 ZNF853P0CG23 659 aa24■■□□□ 1.43
PTPN18-203ENST00000409022 KRT24Q2M2I5 525 aa24■■□□□ 1.43
PTPN18-203ENST00000409022 PROSER3Q2NL68 480 aa24■■□□□ 1.43
PTPN18-203ENST00000409022 XAGE3Q8WTP9 111 aa24■■□□□ 1.43
PTPN18-203ENST00000409022 ANKRD31Q8N7Z5 1873 aa23.99■■□□□ 1.43
PTPN18-203ENST00000409022 CCDC184Q52MB2 194 aa23.99■■□□□ 1.43
PTPN18-203ENST00000409022 TAOK3Q9H2K8 898 aa23.99■■□□□ 1.43
PTPN18-203ENST00000409022 HYPKQ9NX55 129 aa23.99■■□□□ 1.43
PTPN18-203ENST00000409022 CHPF2Q9P2E5 772 aa23.99■■□□□ 1.43
PTPN18-203ENST00000409022 RNF123Q5XPI4 1314 aa23.99■■□□□ 1.43
PTPN18-203ENST00000409022 CCDC27Q2M243 656 aa23.98■■□□□ 1.43
PTPN18-203ENST00000409022 NCBP3Q53F19 620 aaKnown RBP23.98■■□□□ 1.43
PTPN18-203ENST00000409022 SUSD4Q5VX71 490 aa23.98■■□□□ 1.43
PTPN18-203ENST00000409022 NUTM1Q86Y26 1132 aa23.98■■□□□ 1.43
PTPN18-203ENST00000409022 UTP14AQ9BVJ6 771 aaKnown RBP23.98■■□□□ 1.43
PTPN18-203ENST00000409022 UBN2Q6ZU65 1347 aa23.98■■□□□ 1.43
PTPN18-203ENST00000409022 SENP3-EIF4A1A0A087X0R7 540 aa23.97■■□□□ 1.43
PTPN18-203ENST00000409022 NFKBIEO00221 500 aa23.97■■□□□ 1.43
PTPN18-203ENST00000409022 ERFEQ4G0M1 354 aa23.97■■□□□ 1.43
PTPN18-203ENST00000409022 CCDC93Q567U6 631 aa23.97■■□□□ 1.43
PTPN18-203ENST00000409022 RPGRQ92834 1020 aaKnown RBP23.97■■□□□ 1.43
PTPN18-203ENST00000409022 LTBP3Q9NS15 1303 aa23.97■■□□□ 1.43
PTPN18-203ENST00000409022 RIC1Q4ADV7 1423 aa23.96■■□□□ 1.43
PTPN18-203ENST00000409022 C16orf71Q8IYS4 520 aaPredicted RBP23.96■■□□□ 1.43
PTPN18-203ENST00000409022 KIF3CO14782 793 aa23.95■■□□□ 1.42
PTPN18-203ENST00000409022 NTSR2O95665 410 aa23.95■■□□□ 1.42
PTPN18-203ENST00000409022 CRY2Q49AN0 593 aa23.95■■□□□ 1.42
PTPN18-203ENST00000409022 ABCC12Q96J65 1359 aa23.94■■□□□ 1.42
PTPN18-203ENST00000409022 COL11A2P13942 1736 aaPredicted RBP23.94■■□□□ 1.42
PTPN18-203ENST00000409022 TCIRG1Q13488 830 aa23.94■■□□□ 1.42
PTPN18-203ENST00000409022 ANKRD13DQ6ZTN6 518 aa23.94■■□□□ 1.42
PTPN18-203ENST00000409022 RTKN2Q8IZC4 609 aa23.94■■□□□ 1.42
PTPN18-203ENST00000409022 PLBD2Q8NHP8 589 aa23.94■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms