RNA–Protein interactions for RNA: ENST00000409020.5

NIF3L1-202, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-202ENST00000409020 EIF4A1P60842 406 aaKnown RBP12.71□□□□□ -0.37
NIF3L1-202ENST00000409020 ARHGAP27Q6ZUM4 889 aa12.71□□□□□ -0.37
NIF3L1-202ENST00000409020 DZIP3Q86Y13 1208 aaKnown RBP12.71□□□□□ -0.37
NIF3L1-202ENST00000409020 SPINK5Q9NQ38 1064 aaPredicted RBP12.71□□□□□ -0.37
NIF3L1-202ENST00000409020 PIM2Q9P1W9 311 aa12.71□□□□□ -0.37
NIF3L1-202ENST00000409020 BCORQ6W2J9 1755 aa12.71□□□□□ -0.38
NIF3L1-202ENST00000409020 TMPOP42166 694 aaKnown RBP12.7□□□□□ -0.38
NIF3L1-202ENST00000409020 DALRD3Q5D0E6 543 aaKnown RBP12.7□□□□□ -0.38
NIF3L1-202ENST00000409020 PRR5LQ6MZQ0 368 aa12.7□□□□□ -0.38
NIF3L1-202ENST00000409020 GIGYF1O75420 1035 aaPredicted RBP12.7□□□□□ -0.38
NIF3L1-202ENST00000409020 NEUROD2Q15784 382 aa12.7□□□□□ -0.38
NIF3L1-202ENST00000409020 ADAMTS8Q9UP79 889 aa12.7□□□□□ -0.38
NIF3L1-202ENST00000409020 ANKRD31Q8N7Z5 1873 aa12.69□□□□□ -0.38
NIF3L1-202ENST00000409020 LAMB4A4D0S4 1761 aa12.69□□□□□ -0.38
NIF3L1-202ENST00000409020 HLFQ16534 295 aa12.69□□□□□ -0.38
NIF3L1-202ENST00000409020 DIEXFQ68CQ4 756 aaKnown RBP12.69□□□□□ -0.38
NIF3L1-202ENST00000409020 C2CD5Q86YS7 1000 aa12.69□□□□□ -0.38
NIF3L1-202ENST00000409020 COL11A2P13942 1736 aaPredicted RBP12.68□□□□□ -0.38
NIF3L1-202ENST00000409020 C1QTNF8P60827 252 aa12.68□□□□□ -0.38
NIF3L1-202ENST00000409020 NGEFQ8N5V2 710 aa12.68□□□□□ -0.38
NIF3L1-202ENST00000409020 PNNQ9H307 717 aaKnown RBP12.68□□□□□ -0.38
NIF3L1-202ENST00000409020 TSPYL4Q9UJ04 414 aa12.68□□□□□ -0.38
NIF3L1-202ENST00000409020 ARFGEF1Q9Y6D6 1849 aa12.68□□□□□ -0.38
NIF3L1-202ENST00000409020 RASSF7Q02833 373 aa12.67□□□□□ -0.38
NIF3L1-202ENST00000409020 PNISRQ8TF01 805 aaKnown RBP12.67□□□□□ -0.38
NIF3L1-202ENST00000409020 SETDB2Q96T68 719 aa12.67□□□□□ -0.38
NIF3L1-202ENST00000409020 TRIM35Q9UPQ4 493 aa12.67□□□□□ -0.38
NIF3L1-202ENST00000409020 PDIA4P13667 645 aaKnown RBP12.67□□□□□ -0.38
NIF3L1-202ENST00000409020 MYL6BP14649 208 aa12.67□□□□□ -0.38
NIF3L1-202ENST00000409020 PRELPP51888 382 aa12.67□□□□□ -0.38
NIF3L1-202ENST00000409020 WDR43Q15061 677 aaKnown RBP eCLIP12.67□□□□□ -0.38
NIF3L1-202ENST00000409020 KRT24Q2M2I5 525 aa12.67□□□□□ -0.38
NIF3L1-202ENST00000409020 CCDC184Q52MB2 194 aa12.67□□□□□ -0.38
NIF3L1-202ENST00000409020 TTLL7Q6ZT98 887 aa12.67□□□□□ -0.38
NIF3L1-202ENST00000409020 NPM2Q86SE8 214 aaKnown RBP12.67□□□□□ -0.38
NIF3L1-202ENST00000409020 GPBP1L1Q9HC44 474 aaPredicted RBP12.67□□□□□ -0.38
NIF3L1-202ENST00000409020 DLEC1Q9Y238 1755 aa12.66□□□□□ -0.38
NIF3L1-202ENST00000409020 FAM177BA6PVY3 158 aa12.66□□□□□ -0.38
NIF3L1-202ENST00000409020 MKRN4PQ13434 485 aaPredicted RBP12.66□□□□□ -0.38
NIF3L1-202ENST00000409020 C9orf131Q5VYM1 1079 aa12.66□□□□□ -0.38
NIF3L1-202ENST00000409020 CNBD1Q8NA66 436 aa12.66□□□□□ -0.38
NIF3L1-202ENST00000409020 SENP3-EIF4A1A0A087X0R7 540 aa12.65□□□□□ -0.38
NIF3L1-202ENST00000409020 H0YIN7 160 aa12.65□□□□□ -0.38
NIF3L1-202ENST00000409020 ANXA1P04083 346 aa12.65□□□□□ -0.38
NIF3L1-202ENST00000409020 PROSER3Q2NL68 480 aa12.65□□□□□ -0.38
NIF3L1-202ENST00000409020 RUNDC1Q96C34 613 aa12.65□□□□□ -0.38
NIF3L1-202ENST00000409020 BRIP1Q9BX63 1249 aa12.65□□□□□ -0.38
NIF3L1-202ENST00000409020 LRP10Q7Z4F1 713 aa12.64□□□□□ -0.39
NIF3L1-202ENST00000409020 NIP7Q9Y221 180 aaKnown RBP eCLIP12.64□□□□□ -0.39
NIF3L1-202ENST00000409020 EIF2S2P20042 333 aaKnown RBP12.64□□□□□ -0.39
NIF3L1-202ENST00000409020 PDE4CQ08493 712 aa12.64□□□□□ -0.39
NIF3L1-202ENST00000409020 PDIA6Q15084 440 aa12.64□□□□□ -0.39
NIF3L1-202ENST00000409020 CLEC4GQ6UXB4 293 aa12.64□□□□□ -0.39
NIF3L1-202ENST00000409020 NBPF5PQ86XG9 351 aaPredicted RBP12.64□□□□□ -0.39
NIF3L1-202ENST00000409020 TTLL6Q8N841 843 aa12.64□□□□□ -0.39
NIF3L1-202ENST00000409020 NECTIN2Q92692 538 aa12.64□□□□□ -0.39
NIF3L1-202ENST00000409020 ZNF622Q969S3 477 aaKnown RBP eCLIP12.64□□□□□ -0.39
NIF3L1-202ENST00000409020 RNF39Q9H2S5 420 aa12.64□□□□□ -0.39
NIF3L1-202ENST00000409020 NFKBIEO00221 500 aa12.63□□□□□ -0.39
NIF3L1-202ENST00000409020 KIF3CO14782 793 aa12.63□□□□□ -0.39
NIF3L1-202ENST00000409020 ZBTB3Q9H5J0 574 aa12.63□□□□□ -0.39
NIF3L1-202ENST00000409020 RNF181Q9P0P0 153 aa12.63□□□□□ -0.39
NIF3L1-202ENST00000409020 ZNF652Q9Y2D9 606 aa12.63□□□□□ -0.39
NIF3L1-202ENST00000409020 LAS1LQ9Y4W2 734 aaKnown RBP12.63□□□□□ -0.39
NIF3L1-202ENST00000409020 NPHP1O15259 732 aa12.62□□□□□ -0.39
NIF3L1-202ENST00000409020 PDE6BP35913 854 aa12.62□□□□□ -0.39
NIF3L1-202ENST00000409020 ST5P78524 1137 aa12.62□□□□□ -0.39
NIF3L1-202ENST00000409020 NMRK2Q9NPI5 230 aa12.62□□□□□ -0.39
NIF3L1-202ENST00000409020 TNRC6CQ9HCJ0 1690 aaKnown RBP12.61□□□□□ -0.39
NIF3L1-202ENST00000409020 ABCC12Q96J65 1359 aa12.61□□□□□ -0.39
NIF3L1-202ENST00000409020 MAP3K15Q6ZN16 1313 aa12.61□□□□□ -0.39
NIF3L1-202ENST00000409020 UBN2Q6ZU65 1347 aa12.61□□□□□ -0.39
NIF3L1-202ENST00000409020 CHL1O00533 1208 aa12.61□□□□□ -0.39
NIF3L1-202ENST00000409020 C21orf2O43822 256 aa12.61□□□□□ -0.39
NIF3L1-202ENST00000409020 SRGNP10124 158 aa12.61□□□□□ -0.39
NIF3L1-202ENST00000409020 GPTP24298 496 aa12.61□□□□□ -0.39
NIF3L1-202ENST00000409020 LMOD3Q0VAK6 560 aa12.61□□□□□ -0.39
NIF3L1-202ENST00000409020 GLIPR1L2Q4G1C9 344 aa12.61□□□□□ -0.39
NIF3L1-202ENST00000409020 APAF1O14727 1248 aa12.61□□□□□ -0.39
NIF3L1-202ENST00000409020 OLFM4Q6UX06 510 aa12.61□□□□□ -0.39
NIF3L1-202ENST00000409020 SLC51AQ86UW1 340 aa12.61□□□□□ -0.39
NIF3L1-202ENST00000409020 NUTM1Q86Y26 1132 aa12.61□□□□□ -0.39
NIF3L1-202ENST00000409020 SBF1O95248 1867 aa12.6□□□□□ -0.39
NIF3L1-202ENST00000409020 PRPF40BQ6NWY9 871 aaKnown RBP12.6□□□□□ -0.39
NIF3L1-202ENST00000409020 KIF6Q6ZMV9 814 aa12.6□□□□□ -0.39
NIF3L1-202ENST00000409020 BABAM1Q9NWV8 329 aa12.6□□□□□ -0.39
NIF3L1-202ENST00000409020 SLX4Q8IY92 1834 aa12.59□□□□□ -0.39
NIF3L1-202ENST00000409020 ERVV-1B6SEH8 477 aa12.59□□□□□ -0.39
NIF3L1-202ENST00000409020 DEKP35659 375 aaKnown RBP12.59□□□□□ -0.39
NIF3L1-202ENST00000409020 ERFEQ4G0M1 354 aa12.59□□□□□ -0.39
NIF3L1-202ENST00000409020 ZNF428Q96B54 188 aa12.59□□□□□ -0.39
NIF3L1-202ENST00000409020 CACNA1SQ13698 1873 aa12.58□□□□□ -0.4
NIF3L1-202ENST00000409020 KLRG2A4D1S0 409 aaPredicted RBP12.58□□□□□ -0.4
NIF3L1-202ENST00000409020 TPTE2Q6XPS3 522 aa12.58□□□□□ -0.4
NIF3L1-202ENST00000409020 MASTLQ96GX5 879 aa12.58□□□□□ -0.4
NIF3L1-202ENST00000409020 CCDC136Q96JN2 1154 aa12.58□□□□□ -0.4
NIF3L1-202ENST00000409020 NUP98P52948 1817 aa12.58□□□□□ -0.4
NIF3L1-202ENST00000409020 ERBB4Q15303 1308 aa12.58□□□□□ -0.4
NIF3L1-202ENST00000409020 ZNF316A6NFI3 1004 aaPredicted RBP12.57□□□□□ -0.4
NIF3L1-202ENST00000409020 RGL2O15211 777 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms