RNA–Protein interactions for RNA: ENST00000407404.5

NR1H3-204, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 5 BASIC

Gene NR1H3, Length 1,330 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-204ENST00000407404 FANCIQ9NVI1 1328 aa21.62■■□□□ 1.05
NR1H3-204ENST00000407404 DCAF8L1A6NGE4 600 aa21.61■■□□□ 1.05
NR1H3-204ENST00000407404 SERPINB2P05120 415 aa21.61■■□□□ 1.05
NR1H3-204ENST00000407404 SETDB2Q96T68 719 aa21.61■■□□□ 1.05
NR1H3-204ENST00000407404 MAP3K15Q6ZN16 1313 aa21.61■■□□□ 1.05
NR1H3-204ENST00000407404 ZNF521Q96K83 1311 aa21.61■■□□□ 1.05
NR1H3-204ENST00000407404 C10orf71Q711Q0 1435 aa21.61■■□□□ 1.05
NR1H3-204ENST00000407404 KIF13BQ9NQT8 1826 aa21.61■■□□□ 1.05
NR1H3-204ENST00000407404 GOLGA2Q08379 1002 aa21.6■■□□□ 1.05
NR1H3-204ENST00000407404 HLFQ16534 295 aa21.6■■□□□ 1.05
NR1H3-204ENST00000407404 TSPYL6Q8N831 410 aa21.6■■□□□ 1.05
NR1H3-204ENST00000407404 MYH16Q9H6N6 1097 aa21.6■■□□□ 1.05
NR1H3-204ENST00000407404 SPINK5Q9NQ38 1064 aaPredicted RBP21.6■■□□□ 1.05
NR1H3-204ENST00000407404 AFDNP55196 1824 aaKnown RBP21.6■■□□□ 1.05
NR1H3-204ENST00000407404 SRCAPQ6ZRS2 3230 aa21.6■■□□□ 1.05
NR1H3-204ENST00000407404 COPS6Q7L5N1 327 aa21.59■■□□□ 1.05
NR1H3-204ENST00000407404 CARMIL3Q8ND23 1372 aa21.59■■□□□ 1.05
NR1H3-204ENST00000407404 XAGE3Q8WTP9 111 aa21.59■■□□□ 1.05
NR1H3-204ENST00000407404 ZBTB3Q9H5J0 574 aa21.59■■□□□ 1.05
NR1H3-204ENST00000407404 NRXN2Q9P2S2 1712 aa21.59■■□□□ 1.05
NR1H3-204ENST00000407404 AIMP1Q12904 312 aaKnown RBP21.58■■□□□ 1.05
NR1H3-204ENST00000407404 TWISTNBQ3B726 338 aaPredicted RBP21.58■■□□□ 1.05
NR1H3-204ENST00000407404 HYPKQ9NX55 129 aa21.58■■□□□ 1.05
NR1H3-204ENST00000407404 TGFB2P61812 414 aa21.57■■□□□ 1.04
NR1H3-204ENST00000407404 CCDC30Q5VVM6 783 aa21.57■■□□□ 1.04
NR1H3-204ENST00000407404 NIP7Q9Y221 180 aaKnown RBP eCLIP21.57■■□□□ 1.04
NR1H3-204ENST00000407404 NUP98P52948 1817 aa21.57■■□□□ 1.04
NR1H3-204ENST00000407404 EXOSC9Q06265 439 aaKnown RBP21.55■■□□□ 1.04
NR1H3-204ENST00000407404 GIGYF2Q6Y7W6 1299 aaKnown RBP21.55■■□□□ 1.04
NR1H3-204ENST00000407404 NPHP1O15259 732 aa21.55■■□□□ 1.04
NR1H3-204ENST00000407404 PXDNLA1KZ92 1463 aa21.54■■□□□ 1.04
NR1H3-204ENST00000407404 KIAA1551Q9HCM1 1747 aa21.54■■□□□ 1.04
NR1H3-204ENST00000407404 GPR162Q16538 588 aa21.54■■□□□ 1.04
NR1H3-204ENST00000407404 PRR5LQ6MZQ0 368 aa21.54■■□□□ 1.04
NR1H3-204ENST00000407404 NBPF5PQ86XG9 351 aaPredicted RBP21.54■■□□□ 1.04
NR1H3-204ENST00000407404 PELP1Q8IZL8 1130 aaKnown RBP21.54■■□□□ 1.04
NR1H3-204ENST00000407404 CNBD1Q8NA66 436 aa21.54■■□□□ 1.04
NR1H3-204ENST00000407404 ATP10DQ9P241 1426 aa21.53■■□□□ 1.04
NR1H3-204ENST00000407404 N4BP2Q86UW6 1770 aaPredicted RBP21.53■■□□□ 1.04
NR1H3-204ENST00000407404 A0A0G2JLW4 131 aa21.53■■□□□ 1.04
NR1H3-204ENST00000407404 E9PSI1 815 aa21.53■■□□□ 1.04
NR1H3-204ENST00000407404 STK31Q9BXU1 1019 aa21.53■■□□□ 1.04
NR1H3-204ENST00000407404 VAMP4O75379 141 aa21.52■■□□□ 1.03
NR1H3-204ENST00000407404 DPEP1P16444 411 aa21.52■■□□□ 1.03
NR1H3-204ENST00000407404 ANKRD13DQ6ZTN6 518 aa21.52■■□□□ 1.03
NR1H3-204ENST00000407404 ZNF34Q8IZ26 560 aa21.52■■□□□ 1.03
NR1H3-204ENST00000407404 FAM177BA6PVY3 158 aa21.51■■□□□ 1.03
NR1H3-204ENST00000407404 TCERG1O14776 1098 aaKnown RBP21.51■■□□□ 1.03
NR1H3-204ENST00000407404 GPTP24298 496 aa21.51■■□□□ 1.03
NR1H3-204ENST00000407404 ST5P78524 1137 aa21.51■■□□□ 1.03
NR1H3-204ENST00000407404 HSP90AB3PQ58FF7 597 aa21.51■■□□□ 1.03
NR1H3-204ENST00000407404 TPTE2Q6XPS3 522 aa21.51■■□□□ 1.03
NR1H3-204ENST00000407404 PLBD2Q8NHP8 589 aa21.51■■□□□ 1.03
NR1H3-204ENST00000407404 PHAXQ9H814 394 aaKnown RBP21.51■■□□□ 1.03
NR1H3-204ENST00000407404 SLFN5Q08AF3 891 aa21.5■■□□□ 1.03
NR1H3-204ENST00000407404 CCDC24Q8N4L8 307 aa21.5■■□□□ 1.03
NR1H3-204ENST00000407404 BRIP1Q9BX63 1249 aa21.49■■□□□ 1.03
NR1H3-204ENST00000407404 NYXQ9GZU5 481 aa21.49■■□□□ 1.03
NR1H3-204ENST00000407404 UBN2Q6ZU65 1347 aa21.48■■□□□ 1.03
NR1H3-204ENST00000407404 YBX3P16989 372 aaKnown RBP eCLIP21.48■■□□□ 1.03
NR1H3-204ENST00000407404 KCNA3P22001 575 aa21.48■■□□□ 1.03
NR1H3-204ENST00000407404 GTF2E1P29083 439 aaPredicted RBP21.48■■□□□ 1.03
NR1H3-204ENST00000407404 CHRNA5P30532 468 aa21.48■■□□□ 1.03
NR1H3-204ENST00000407404 PDE6BP35913 854 aa21.48■■□□□ 1.03
NR1H3-204ENST00000407404 TCIRG1Q13488 830 aa21.48■■□□□ 1.03
NR1H3-204ENST00000407404 PARP10Q53GL7 1025 aa21.48■■□□□ 1.03
NR1H3-204ENST00000407404 RIC3Q7Z5B4 369 aa21.48■■□□□ 1.03
NR1H3-204ENST00000407404 CDCA7LQ96GN5 454 aa21.48■■□□□ 1.03
NR1H3-204ENST00000407404 WWC3Q9ULE0 1092 aa21.48■■□□□ 1.03
NR1H3-204ENST00000407404 ANKRD36CQ5JPF3 1778 aa21.48■■□□□ 1.03
NR1H3-204ENST00000407404 ANKRD31Q8N7Z5 1873 aa21.47■■□□□ 1.03
NR1H3-204ENST00000407404 DDX58O95786 925 aaKnown RBP21.47■■□□□ 1.03
NR1H3-204ENST00000407404 SLC4A2P04920 1241 aa21.47■■□□□ 1.03
NR1H3-204ENST00000407404 PDZRN3Q9UPQ7 1066 aa21.47■■□□□ 1.03
NR1H3-204ENST00000407404 IBTKQ9P2D0 1353 aaPredicted RBP21.46■■□□□ 1.03
NR1H3-204ENST00000407404 H0YIN7 160 aa21.46■■□□□ 1.03
NR1H3-204ENST00000407404 HNRNPUQ00839 825 aaKnown RBP eCLIP21.46■■□□□ 1.03
NR1H3-204ENST00000407404 SUSD4Q5VX71 490 aa21.46■■□□□ 1.03
NR1H3-204ENST00000407404 PPP1R42Q7Z4L9 355 aa21.46■■□□□ 1.03
NR1H3-204ENST00000407404 C2CD5Q86YS7 1000 aa21.46■■□□□ 1.03
NR1H3-204ENST00000407404 PIM2Q9P1W9 311 aa21.46■■□□□ 1.03
NR1H3-204ENST00000407404 GRIN3BO60391 1043 aa21.45■■□□□ 1.02
NR1H3-204ENST00000407404 ARFGEF2Q9Y6D5 1785 aa21.45■■□□□ 1.02
NR1H3-204ENST00000407404 BRCA1P38398 1863 aaKnown RBP21.44■■□□□ 1.02
NR1H3-204ENST00000407404 BCS1LQ9Y276 419 aa21.44■■□□□ 1.02
NR1H3-204ENST00000407404 NTSR2O95665 410 aa21.43■■□□□ 1.02
NR1H3-204ENST00000407404 ERFEQ4G0M1 354 aa21.43■■□□□ 1.02
NR1H3-204ENST00000407404 G2E3Q7L622 706 aa21.43■■□□□ 1.02
NR1H3-204ENST00000407404 NLRP10Q86W26 655 aa21.43■■□□□ 1.02
NR1H3-204ENST00000407404 NUTM1Q86Y26 1132 aa21.43■■□□□ 1.02
NR1H3-204ENST00000407404 TRMT2AQ8IZ69 625 aaKnown RBP21.43■■□□□ 1.02
NR1H3-204ENST00000407404 UTP14AQ9BVJ6 771 aaKnown RBP21.43■■□□□ 1.02
NR1H3-204ENST00000407404 DLEC1Q9Y238 1755 aa21.43■■□□□ 1.02
NR1H3-204ENST00000407404 CACNA1FO60840 1977 aa21.43■■□□□ 1.02
NR1H3-204ENST00000407404 DALRD3Q5D0E6 543 aaKnown RBP21.42■■□□□ 1.02
NR1H3-204ENST00000407404 ISCA1Q9BUE6 129 aa21.42■■□□□ 1.02
NR1H3-204ENST00000407404 ATP5J2-PTCD1G3V325 749 aa21.41■■□□□ 1.02
NR1H3-204ENST00000407404 KSR2Q6VAB6 950 aa21.41■■□□□ 1.02
NR1H3-204ENST00000407404 FLIIQ13045 1269 aa21.4■■□□□ 1.02
NR1H3-204ENST00000407404 ZNF622Q969S3 477 aaKnown RBP eCLIP21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms