RNA–Protein interactions for RNA: ENST00000407218.5

MECP2-203, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 5 BASIC

Gene MECP2, Length 1,174 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-203ENST00000407218 CAMTA2O94983 1202 aa21.48■■□□□ 1.03
MECP2-203ENST00000407218 MMP10P09238 476 aa21.48■■□□□ 1.03
MECP2-203ENST00000407218 KIF6Q6ZMV9 814 aa21.48■■□□□ 1.03
MECP2-203ENST00000407218 XAGE3Q8WTP9 111 aa21.48■■□□□ 1.03
MECP2-203ENST00000407218 YTHDC1Q96MU7 727 aaKnown RBP21.48■■□□□ 1.03
MECP2-203ENST00000407218 DDX21Q9NR30 783 aaKnown RBP eCLIP21.48■■□□□ 1.03
MECP2-203ENST00000407218 CCDC30Q5VVM6 783 aa21.47■■□□□ 1.03
MECP2-203ENST00000407218 ZBTB3Q9H5J0 574 aa21.47■■□□□ 1.03
MECP2-203ENST00000407218 BCL2L12Q9HB09 334 aa21.47■■□□□ 1.03
MECP2-203ENST00000407218 DBF4Q9UBU7 674 aaPredicted RBP21.47■■□□□ 1.03
MECP2-203ENST00000407218 UTRNP46939 3433 aa21.46■■□□□ 1.03
MECP2-203ENST00000407218 COPS6Q7L5N1 327 aa21.46■■□□□ 1.03
MECP2-203ENST00000407218 PELP1Q8IZL8 1130 aaKnown RBP21.46■■□□□ 1.03
MECP2-203ENST00000407218 VAMP4O75379 141 aa21.45■■□□□ 1.02
MECP2-203ENST00000407218 LRP10Q7Z4F1 713 aa21.45■■□□□ 1.02
MECP2-203ENST00000407218 STK31Q9BXU1 1019 aa21.45■■□□□ 1.02
MECP2-203ENST00000407218 YBX3P16989 372 aaKnown RBP eCLIP21.44■■□□□ 1.022e-6■□□□□ 10
MECP2-203ENST00000407218 HLFQ16534 295 aa21.44■■□□□ 1.02
MECP2-203ENST00000407218 TBC1D9BQ66K14 1250 aa21.44■■□□□ 1.02
MECP2-203ENST00000407218 ZBED9Q6R2W3 1325 aa21.44■■□□□ 1.02
MECP2-203ENST00000407218 C10orf71Q711Q0 1435 aa21.44■■□□□ 1.02
MECP2-203ENST00000407218 KIF13BQ9NQT8 1826 aa21.43■■□□□ 1.02
MECP2-203ENST00000407218 PHAXQ9H814 394 aaKnown RBP21.43■■□□□ 1.02
MECP2-203ENST00000407218 HYPKQ9NX55 129 aa21.43■■□□□ 1.02
MECP2-203ENST00000407218 SCN7AQ01118 1682 aa21.43■■□□□ 1.02
MECP2-203ENST00000407218 DDR1Q08345 913 aa21.42■■□□□ 1.02
MECP2-203ENST00000407218 NFIXQ14938 502 aa21.42■■□□□ 1.02
MECP2-203ENST00000407218 MAP3K15Q6ZN16 1313 aa21.42■■□□□ 1.02
MECP2-203ENST00000407218 ZNF784Q8NCA9 323 aaPredicted RBP21.42■■□□□ 1.02
MECP2-203ENST00000407218 ZNF652Q9Y2D9 606 aa21.42■■□□□ 1.02
MECP2-203ENST00000407218 PARP3Q9Y6F1 533 aa21.42■■□□□ 1.02
MECP2-203ENST00000407218 TGFB2P61812 414 aa21.41■■□□□ 1.02
MECP2-203ENST00000407218 FAM177BA6PVY3 158 aa21.4■■□□□ 1.02
MECP2-203ENST00000407218 SLC4A2P04920 1241 aa21.4■■□□□ 1.02
MECP2-203ENST00000407218 TRMT2AQ8IZ69 625 aaKnown RBP21.4■■□□□ 1.02
MECP2-203ENST00000407218 CHMP4AQ9BY43 222 aa21.4■■□□□ 1.02
MECP2-203ENST00000407218 BCORQ6W2J9 1755 aa21.4■■□□□ 1.02
MECP2-203ENST00000407218 PXDNLA1KZ92 1463 aa21.39■■□□□ 1.02
MECP2-203ENST00000407218 GPTP24298 496 aa21.39■■□□□ 1.01
MECP2-203ENST00000407218 G2E3Q7L622 706 aa21.39■■□□□ 1.01
MECP2-203ENST00000407218 ZNF428Q96B54 188 aa21.39■■□□□ 1.01
MECP2-203ENST00000407218 GOLGB1Q14789 3259 aaKnown RBP21.39■■□□□ 1.01
MECP2-203ENST00000407218 POLRMTO00411 1230 aaKnown RBP21.38■■□□□ 1.01
MECP2-203ENST00000407218 TM4SF1P30408 202 aa21.38■■□□□ 1.01
MECP2-203ENST00000407218 SETDB2Q96T68 719 aa21.38■■□□□ 1.01
MECP2-203ENST00000407218 BCL2L13Q9BXK5 485 aa21.38■■□□□ 1.01
MECP2-203ENST00000407218 NIP7Q9Y221 180 aaKnown RBP eCLIP21.38■■□□□ 1.01
MECP2-203ENST00000407218 ERVV-1B6SEH8 477 aa21.37■■□□□ 1.01
MECP2-203ENST00000407218 NPHP1O15259 732 aa21.37■■□□□ 1.01
MECP2-203ENST00000407218 CCDC24Q8N4L8 307 aa21.37■■□□□ 1.01
MECP2-203ENST00000407218 KIAA1551Q9HCM1 1747 aa21.37■■□□□ 1.01
MECP2-203ENST00000407218 CLEC4GQ6UXB4 293 aa21.36■■□□□ 1.01
MECP2-203ENST00000407218 ANKRD13DQ6ZTN6 518 aa21.36■■□□□ 1.01
MECP2-203ENST00000407218 RIC3Q7Z5B4 369 aa21.36■■□□□ 1.01
MECP2-203ENST00000407218 SERPINB2P05120 415 aa21.35■■□□□ 1.01
MECP2-203ENST00000407218 PLBD2Q8NHP8 589 aa21.35■■□□□ 1.01
MECP2-203ENST00000407218 FLIIQ13045 1269 aa21.34■■□□□ 1.01
MECP2-203ENST00000407218 GIGYF2Q6Y7W6 1299 aaKnown RBP21.34■■□□□ 1.01
MECP2-203ENST00000407218 CARMIL3Q8ND23 1372 aa21.34■■□□□ 1.01
MECP2-203ENST00000407218 NUP98P52948 1817 aa21.33■■□□□ 1.01
MECP2-203ENST00000407218 ATP5J2-PTCD1G3V325 749 aa21.32■■□□□ 1
MECP2-203ENST00000407218 DDX58O95786 925 aaKnown RBP21.32■■□□□ 1
MECP2-203ENST00000407218 FKBP5Q13451 457 aaPredicted RBP21.32■■□□□ 1
MECP2-203ENST00000407218 NBPF5PQ86XG9 351 aaPredicted RBP21.32■■□□□ 1
MECP2-203ENST00000407218 SSH1Q8WYL5 1049 aa21.32■■□□□ 1
MECP2-203ENST00000407218 SMC4Q9NTJ3 1288 aa21.32■■□□□ 1
MECP2-203ENST00000407218 PI4KAP2A4QPH2 592 aa21.31■■□□□ 1
MECP2-203ENST00000407218 PI4KAP1Q8N8J0 262 aa21.31■■□□□ 1
MECP2-203ENST00000407218 MYD88Q99836 296 aa21.31■■□□□ 1
MECP2-203ENST00000407218 WWC3Q9ULE0 1092 aa21.31■■□□□ 1
MECP2-203ENST00000407218 MAP3K2Q9Y2U5 619 aa21.31■■□□□ 1
MECP2-203ENST00000407218 UBN2Q6ZU65 1347 aa21.3■■□□□ 1
MECP2-203ENST00000407218 ATP10DQ9P241 1426 aa21.3■■□□□ 1
MECP2-203ENST00000407218 MRPL50Q8N5N7 158 aaKnown RBP21.3■■□□□ 1
MECP2-203ENST00000407218 CNBD1Q8NA66 436 aa21.3■■□□□ 1
MECP2-203ENST00000407218 AFDNP55196 1824 aaKnown RBP21.29■■□□□ 1
MECP2-203ENST00000407218 ADCY9O60503 1353 aa21.29■■□□□ 1
MECP2-203ENST00000407218 GTF2E1P29083 439 aaPredicted RBP21.29■■□□□ 1
MECP2-203ENST00000407218 TCIRG1Q13488 830 aa21.29■■□□□ 1
MECP2-203ENST00000407218 HSP90AB3PQ58FF7 597 aa21.29■■□□□ 1
MECP2-203ENST00000407218 SUSD4Q5VX71 490 aa21.29■■□□□ 1
MECP2-203ENST00000407218 PRR5LQ6MZQ0 368 aa21.29■■□□□ 1
MECP2-203ENST00000407218 NUTM1Q86Y26 1132 aa21.29■■□□□ 1
MECP2-203ENST00000407218 ZNF34Q8IZ26 560 aa21.29■■□□□ 1
MECP2-203ENST00000407218 A0A0G2JLW4 131 aa21.28■■□□□ 1
MECP2-203ENST00000407218 RGL2O15211 777 aa21.28■■□□□ 1
MECP2-203ENST00000407218 DPEP1P16444 411 aa21.28■■□□□ 1
MECP2-203ENST00000407218 KSR2Q6VAB6 950 aa21.28■■□□□ 1
MECP2-203ENST00000407218 NRXN2Q9P2S2 1712 aa21.28■■□□□ 1
MECP2-203ENST00000407218 N4BP2Q86UW6 1770 aaPredicted RBP21.28■■□□□ 1
MECP2-203ENST00000407218 ARFGEF2Q9Y6D5 1785 aa21.28■■□□□ 1
MECP2-203ENST00000407218 F6X3S4 739 aa21.27■■□□□ 1
MECP2-203ENST00000407218 CT47B1P0C2W7 299 aaPredicted RBP21.27■■□□□ 1
MECP2-203ENST00000407218 ST5P78524 1137 aa21.27■■□□□ 1
MECP2-203ENST00000407218 BRCA1P38398 1863 aaKnown RBP21.26■□□□□ 0.99
MECP2-203ENST00000407218 RARSP54136 660 aaKnown RBP21.26■□□□□ 0.99
MECP2-203ENST00000407218 NLRP10Q86W26 655 aa21.26■□□□□ 0.99
MECP2-203ENST00000407218 KCNA3P22001 575 aa21.25■□□□□ 0.99
MECP2-203ENST00000407218 ALDH1L2Q3SY69 923 aa21.25■□□□□ 0.99
MECP2-203ENST00000407218 PARP10Q53GL7 1025 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms