RNA–Protein interactions for RNA: ENST00000406434.5

FAM49A-202, Transcript of family with sequence similarity 49 member A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene FAM49A, Length 1,386 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49A-202ENST00000406434 NBPF15Q8N660 670 aa13.52□□□□□ -0.25
FAM49A-202ENST00000406434 CAMTA2O94983 1202 aa13.51□□□□□ -0.25
FAM49A-202ENST00000406434 MYL6BP14649 208 aa13.51□□□□□ -0.25
FAM49A-202ENST00000406434 DPEP1P16444 411 aa13.51□□□□□ -0.25
FAM49A-202ENST00000406434 BABAM1Q9NWV8 329 aa13.51□□□□□ -0.25
FAM49A-202ENST00000406434 NECTIN2Q92692 538 aa13.5□□□□□ -0.25
FAM49A-202ENST00000406434 SETDB2Q96T68 719 aa13.5□□□□□ -0.25
FAM49A-202ENST00000406434 BCS1LQ9Y276 419 aa13.5□□□□□ -0.25
FAM49A-202ENST00000406434 KDM3BQ7LBC6 1761 aa13.49□□□□□ -0.25
FAM49A-202ENST00000406434 N4BP2Q86UW6 1770 aaPredicted RBP13.49□□□□□ -0.25
FAM49A-202ENST00000406434 CHL1O00533 1208 aa13.49□□□□□ -0.25
FAM49A-202ENST00000406434 NPHP1O15259 732 aa13.49□□□□□ -0.25
FAM49A-202ENST00000406434 CCDC24Q8N4L8 307 aa13.49□□□□□ -0.25
FAM49A-202ENST00000406434 CHRNA5P30532 468 aa13.48□□□□□ -0.25
FAM49A-202ENST00000406434 C10orf71Q711Q0 1435 aa13.48□□□□□ -0.25
FAM49A-202ENST00000406434 CHD4Q14839 1912 aa13.48□□□□□ -0.25
FAM49A-202ENST00000406434 FAM177BA6PVY3 158 aa13.47□□□□□ -0.25
FAM49A-202ENST00000406434 KRT24Q2M2I5 525 aa13.47□□□□□ -0.25
FAM49A-202ENST00000406434 ZNF652Q9Y2D9 606 aa13.47□□□□□ -0.25
FAM49A-202ENST00000406434 PXDNLA1KZ92 1463 aa13.47□□□□□ -0.25
FAM49A-202ENST00000406434 ANXA1P04083 346 aa13.46□□□□□ -0.25
FAM49A-202ENST00000406434 KCNA3P22001 575 aa13.46□□□□□ -0.25
FAM49A-202ENST00000406434 CALD1Q05682 793 aaKnown RBP13.46□□□□□ -0.25
FAM49A-202ENST00000406434 HLFQ16534 295 aa13.46□□□□□ -0.25
FAM49A-202ENST00000406434 CLEC4GQ6UXB4 293 aa13.46□□□□□ -0.25
FAM49A-202ENST00000406434 KIF6Q6ZMV9 814 aa13.46□□□□□ -0.25
FAM49A-202ENST00000406434 TTLL7Q6ZT98 887 aa13.46□□□□□ -0.25
FAM49A-202ENST00000406434 FAM9BQ8IZU0 186 aa13.46□□□□□ -0.25
FAM49A-202ENST00000406434 CFAP44Q96MT7 982 aa13.46□□□□□ -0.25
FAM49A-202ENST00000406434 PIM2Q9P1W9 311 aa13.46□□□□□ -0.25
FAM49A-202ENST00000406434 SALL2Q9Y467 1007 aaPredicted RBP13.46□□□□□ -0.25
FAM49A-202ENST00000406434 AFDNP55196 1824 aaKnown RBP13.46□□□□□ -0.25
FAM49A-202ENST00000406434 KIF13BQ9NQT8 1826 aa13.46□□□□□ -0.26
FAM49A-202ENST00000406434 ARHGAP27Q6ZUM4 889 aa13.45□□□□□ -0.26
FAM49A-202ENST00000406434 NIP7Q9Y221 180 aaKnown RBP eCLIP13.45□□□□□ -0.26
FAM49A-202ENST00000406434 AIMP1Q12904 312 aaKnown RBP13.45□□□□□ -0.26
FAM49A-202ENST00000406434 NBPF5PQ86XG9 351 aaPredicted RBP13.45□□□□□ -0.26
FAM49A-202ENST00000406434 C2CD5Q86YS7 1000 aa13.45□□□□□ -0.26
FAM49A-202ENST00000406434 ZBTB3Q9H5J0 574 aa13.45□□□□□ -0.26
FAM49A-202ENST00000406434 MBIPQ9NS73 344 aa13.45□□□□□ -0.26
FAM49A-202ENST00000406434 CARMIL3Q8ND23 1372 aa13.44□□□□□ -0.26
FAM49A-202ENST00000406434 H0YIN7 160 aa13.44□□□□□ -0.26
FAM49A-202ENST00000406434 ELL2O00472 640 aaPredicted RBP13.44□□□□□ -0.26
FAM49A-202ENST00000406434 GNAI1P63096 354 aa13.44□□□□□ -0.26
FAM49A-202ENST00000406434 PROSER3Q2NL68 480 aa13.44□□□□□ -0.26
FAM49A-202ENST00000406434 DALRD3Q5D0E6 543 aaKnown RBP13.44□□□□□ -0.26
FAM49A-202ENST00000406434 PRR5LQ6MZQ0 368 aa13.44□□□□□ -0.26
FAM49A-202ENST00000406434 CNBD1Q8NA66 436 aa13.44□□□□□ -0.26
FAM49A-202ENST00000406434 ZNF622Q969S3 477 aaKnown RBP eCLIP13.44□□□□□ -0.26
FAM49A-202ENST00000406434 IFT57Q9NWB7 429 aa13.44□□□□□ -0.26
FAM49A-202ENST00000406434 LAMB4A4D0S4 1761 aa13.43□□□□□ -0.26
FAM49A-202ENST00000406434 ERBB4Q15303 1308 aa13.43□□□□□ -0.26
FAM49A-202ENST00000406434 MAP3K15Q6ZN16 1313 aa13.43□□□□□ -0.26
FAM49A-202ENST00000406434 ERVV-1B6SEH8 477 aa13.43□□□□□ -0.26
FAM49A-202ENST00000406434 ZNF853P0CG23 659 aa13.43□□□□□ -0.26
FAM49A-202ENST00000406434 GTF2E1P29083 439 aaPredicted RBP13.43□□□□□ -0.26
FAM49A-202ENST00000406434 PDE6BP35913 854 aa13.43□□□□□ -0.26
FAM49A-202ENST00000406434 ST5P78524 1137 aa13.43□□□□□ -0.26
FAM49A-202ENST00000406434 PDIA6Q15084 440 aa13.43□□□□□ -0.26
FAM49A-202ENST00000406434 HDGFL1Q5TGJ6 251 aa13.43□□□□□ -0.26
FAM49A-202ENST00000406434 DUSP27Q5VZP5 1158 aa13.43□□□□□ -0.26
FAM49A-202ENST00000406434 BRIP1Q9BX63 1249 aa13.43□□□□□ -0.26
FAM49A-202ENST00000406434 UTRNP46939 3433 aa13.42□□□□□ -0.26
FAM49A-202ENST00000406434 GOLGB1Q14789 3259 aaKnown RBP13.42□□□□□ -0.26
FAM49A-202ENST00000406434 SCN7AQ01118 1682 aa13.42□□□□□ -0.26
FAM49A-202ENST00000406434 GPTP24298 496 aa13.42□□□□□ -0.26
FAM49A-202ENST00000406434 TPTE2Q6XPS3 522 aa13.42□□□□□ -0.26
FAM49A-202ENST00000406434 COPS6Q7L5N1 327 aa13.42□□□□□ -0.26
FAM49A-202ENST00000406434 ZNF784Q8NCA9 323 aaPredicted RBP13.42□□□□□ -0.26
FAM49A-202ENST00000406434 KIAA1551Q9HCM1 1747 aa13.41□□□□□ -0.26
FAM49A-202ENST00000406434 WWC1Q8IX03 1113 aa13.41□□□□□ -0.26
FAM49A-202ENST00000406434 TTLL6Q8N841 843 aa13.41□□□□□ -0.26
FAM49A-202ENST00000406434 XAGE3Q8WTP9 111 aa13.41□□□□□ -0.26
FAM49A-202ENST00000406434 CHPF2Q9P2E5 772 aa13.41□□□□□ -0.26
FAM49A-202ENST00000406434 BCORQ6W2J9 1755 aa13.4□□□□□ -0.26
FAM49A-202ENST00000406434 RGL2O15211 777 aa13.4□□□□□ -0.26
FAM49A-202ENST00000406434 DDX21Q9NR30 783 aaKnown RBP eCLIP13.4□□□□□ -0.26
FAM49A-202ENST00000406434 NRXN2Q9P2S2 1712 aa13.4□□□□□ -0.26
FAM49A-202ENST00000406434 NUP98P52948 1817 aa13.39□□□□□ -0.27
FAM49A-202ENST00000406434 HOXB7P09629 217 aa13.39□□□□□ -0.27
FAM49A-202ENST00000406434 CCDC27Q2M243 656 aa13.39□□□□□ -0.27
FAM49A-202ENST00000406434 GIGYF2Q6Y7W6 1299 aaKnown RBP13.39□□□□□ -0.27
FAM49A-202ENST00000406434 LRP10Q7Z4F1 713 aa13.39□□□□□ -0.27
FAM49A-202ENST00000406434 C8orf58Q8NAV2 365 aa13.39□□□□□ -0.27
FAM49A-202ENST00000406434 TSR2Q969E8 191 aaKnown RBP13.39□□□□□ -0.27
FAM49A-202ENST00000406434 PDZRN3Q9UPQ7 1066 aa13.39□□□□□ -0.27
FAM49A-202ENST00000406434 NUTM1Q86Y26 1132 aa13.38□□□□□ -0.27
FAM49A-202ENST00000406434 NYXQ9GZU5 481 aa13.38□□□□□ -0.27
FAM49A-202ENST00000406434 DBF4Q9UBU7 674 aaPredicted RBP13.38□□□□□ -0.27
FAM49A-202ENST00000406434 SUSD4Q5VX71 490 aa13.37□□□□□ -0.27
FAM49A-202ENST00000406434 ZNF34Q8IZ26 560 aa13.37□□□□□ -0.27
FAM49A-202ENST00000406434 ZNF526Q8TF50 670 aaPredicted RBP13.37□□□□□ -0.27
FAM49A-202ENST00000406434 BRCA1P38398 1863 aaKnown RBP13.37□□□□□ -0.27
FAM49A-202ENST00000406434 SRGNP10124 158 aa13.36□□□□□ -0.27
FAM49A-202ENST00000406434 ERFEQ4G0M1 354 aa13.36□□□□□ -0.27
FAM49A-202ENST00000406434 PPP1R42Q7Z4L9 355 aa13.36□□□□□ -0.27
FAM49A-202ENST00000406434 TSPYL6Q8N831 410 aa13.36□□□□□ -0.27
FAM49A-202ENST00000406434 CNKSR1Q969H4 720 aa13.36□□□□□ -0.27
FAM49A-202ENST00000406434 ZNF428Q96B54 188 aa13.36□□□□□ -0.27
FAM49A-202ENST00000406434 MASTLQ96GX5 879 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms