RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 NOS2P35228 1153 aa7.6□□□□□ -1.19
HMGB3P18-201ENST00000406327 ATP2B2Q01814 1243 aa7.6□□□□□ -1.19
HMGB3P18-201ENST00000406327 CENPCQ03188 943 aa7.6□□□□□ -1.19
HMGB3P18-201ENST00000406327 C11orf91Q3C1V1 193 aa7.6□□□□□ -1.19
HMGB3P18-201ENST00000406327 GNASQ5JWF2 1037 aa7.6□□□□□ -1.19
HMGB3P18-201ENST00000406327 TMEM214Q6NUQ4 689 aaKnown RBP7.6□□□□□ -1.19
HMGB3P18-201ENST00000406327 PPARGC1BQ86YN6 1023 aaKnown RBP7.6□□□□□ -1.19
HMGB3P18-201ENST00000406327 NGLY1Q96IV0 654 aa7.6□□□□□ -1.19
HMGB3P18-201ENST00000406327 FAM13BQ9NYF5 915 aa7.6□□□□□ -1.19
HMGB3P18-201ENST00000406327 PLCB3Q01970 1234 aa7.59□□□□□ -1.19
HMGB3P18-201ENST00000406327 FMR1Q06787 632 aaKnown RBP eCLIP7.59□□□□□ -1.19
HMGB3P18-201ENST00000406327 C1orf53Q5VUE5 145 aa7.59□□□□□ -1.19
HMGB3P18-201ENST00000406327 ALDH16A1Q8IZ83 802 aa7.59□□□□□ -1.19
HMGB3P18-201ENST00000406327 RHBDD1Q8TEB9 315 aa7.59□□□□□ -1.19
HMGB3P18-201ENST00000406327 L3MBTL2Q969R5 705 aa7.59□□□□□ -1.19
HMGB3P18-201ENST00000406327 ALKBH8Q96BT7 664 aaKnown RBP7.59□□□□□ -1.19
HMGB3P18-201ENST00000406327 FHDC1Q9C0D6 1143 aaPredicted RBP7.59□□□□□ -1.19
HMGB3P18-201ENST00000406327 FZD6O60353 706 aa7.58□□□□□ -1.2
HMGB3P18-201ENST00000406327 RPLP1P05386 114 aaKnown RBP7.58□□□□□ -1.2
HMGB3P18-201ENST00000406327 P4HBP07237 508 aaKnown RBP7.58□□□□□ -1.2
HMGB3P18-201ENST00000406327 WDR4P57081 412 aaKnown RBP7.58□□□□□ -1.2
HMGB3P18-201ENST00000406327 CBLBQ13191 982 aa7.58□□□□□ -1.2
HMGB3P18-201ENST00000406327 TTC16Q8NEE8 873 aa7.58□□□□□ -1.2
HMGB3P18-201ENST00000406327 ITPKCQ96DU7 683 aa7.58□□□□□ -1.2
HMGB3P18-201ENST00000406327 FAM129BQ96TA1 746 aa7.58□□□□□ -1.2
HMGB3P18-201ENST00000406327 GPC6Q9Y625 555 aaPredicted RBP7.58□□□□□ -1.2
HMGB3P18-201ENST00000406327 PRPF40AO75400 957 aaKnown RBP7.57□□□□□ -1.2
HMGB3P18-201ENST00000406327 NEFLP07196 543 aa7.57□□□□□ -1.2
HMGB3P18-201ENST00000406327 MZF1P28698 734 aaPredicted RBP7.57□□□□□ -1.2
HMGB3P18-201ENST00000406327 XPCQ01831 940 aaPredicted RBP7.57□□□□□ -1.2
HMGB3P18-201ENST00000406327 EHHADHQ08426 723 aa7.57□□□□□ -1.2
HMGB3P18-201ENST00000406327 NBPF1Q3BBV0 1214 aa7.57□□□□□ -1.2
HMGB3P18-201ENST00000406327 LRFN2Q9ULH4 789 aa7.57□□□□□ -1.2
HMGB3P18-201ENST00000406327 RELBQ01201 579 aa7.56□□□□□ -1.2
HMGB3P18-201ENST00000406327 DGKZQ13574 1117 aa7.56□□□□□ -1.2
HMGB3P18-201ENST00000406327 SLC27A3Q5K4L6 730 aa7.56□□□□□ -1.2
HMGB3P18-201ENST00000406327 KDF1Q8NAX2 398 aaPredicted RBP7.56□□□□□ -1.2
HMGB3P18-201ENST00000406327 IFT43Q96FT9 208 aa7.56□□□□□ -1.2
HMGB3P18-201ENST00000406327 PHACTR1Q9C0D0 580 aa7.56□□□□□ -1.2
HMGB3P18-201ENST00000406327 MRS2Q9HD23 443 aa7.56□□□□□ -1.2
HMGB3P18-201ENST00000406327 USP3Q9Y6I4 520 aa7.56□□□□□ -1.2
HMGB3P18-201ENST00000406327 H3BM21 787 aa7.55□□□□□ -1.2
HMGB3P18-201ENST00000406327 UPP2O95045 317 aa7.55□□□□□ -1.2
HMGB3P18-201ENST00000406327 LDHBP07195 334 aaKnown RBP7.55□□□□□ -1.2
HMGB3P18-201ENST00000406327 ZAP70P43403 619 aa7.55□□□□□ -1.2
HMGB3P18-201ENST00000406327 MAPK8P45983 427 aa7.55□□□□□ -1.2
HMGB3P18-201ENST00000406327 DSC3Q14574 896 aa7.55□□□□□ -1.2
HMGB3P18-201ENST00000406327 GJD3Q8N144 294 aa7.55□□□□□ -1.2
HMGB3P18-201ENST00000406327 MEIOBQ8N635 442 aa7.55□□□□□ -1.2
HMGB3P18-201ENST00000406327 ZDHHC1Q8WTX9 485 aa7.55□□□□□ -1.2
HMGB3P18-201ENST00000406327 TSEN34Q9BSV6 310 aaKnown RBP7.55□□□□□ -1.2
HMGB3P18-201ENST00000406327 KLF16Q9BXK1 252 aaPredicted RBP7.55□□□□□ -1.2
HMGB3P18-201ENST00000406327 CCDC87Q9NVE4 849 aa7.55□□□□□ -1.2
HMGB3P18-201ENST00000406327 HCN4Q9Y3Q4 1203 aa7.55□□□□□ -1.2
HMGB3P18-201ENST00000406327 TIMP2P16035 220 aa7.54□□□□□ -1.2
HMGB3P18-201ENST00000406327 VEGFBP49765 207 aa7.54□□□□□ -1.2
HMGB3P18-201ENST00000406327 ALG1LQ6GMV1 187 aa7.54□□□□□ -1.2
HMGB3P18-201ENST00000406327 ZNF295-AS1Q8N0V1 137 aa7.54□□□□□ -1.2
HMGB3P18-201ENST00000406327 AGBL1Q96MI9 1066 aa7.54□□□□□ -1.2
HMGB3P18-201ENST00000406327 ZDHHC3Q9NYG2 299 aa7.54□□□□□ -1.2
HMGB3P18-201ENST00000406327 RECKO95980 971 aa7.53□□□□□ -1.2
HMGB3P18-201ENST00000406327 TATP17735 454 aaPredicted RBP7.53□□□□□ -1.2
HMGB3P18-201ENST00000406327 DNM1Q05193 864 aaKnown RBP7.53□□□□□ -1.2
HMGB3P18-201ENST00000406327 TSNAXIP1Q2TAA8 658 aa7.53□□□□□ -1.2
HMGB3P18-201ENST00000406327 RHPN1Q8TCX5 695 aa7.53□□□□□ -1.2
HMGB3P18-201ENST00000406327 ZFAND3Q9H8U3 227 aa7.53□□□□□ -1.2
HMGB3P18-201ENST00000406327 POLIQ9UNA4 740 aa7.53□□□□□ -1.2
HMGB3P18-201ENST00000406327 ERBB4Q15303 1308 aa7.52□□□□□ -1.2
HMGB3P18-201ENST00000406327 GPR182O15218 404 aa7.52□□□□□ -1.21
HMGB3P18-201ENST00000406327 PDGFAP04085 211 aa7.52□□□□□ -1.21
HMGB3P18-201ENST00000406327 PLA2G4AP47712 749 aa7.52□□□□□ -1.21
HMGB3P18-201ENST00000406327 RNF144AP50876 292 aaPredicted RBP7.52□□□□□ -1.21
HMGB3P18-201ENST00000406327 NBPF10Q6P3W6 841 aaKnown RBP7.52□□□□□ -1.21
HMGB3P18-201ENST00000406327 ETFBKMTQ8IXQ9 262 aa7.52□□□□□ -1.21
HMGB3P18-201ENST00000406327 FBF1Q8TES7 1133 aa7.52□□□□□ -1.21
HMGB3P18-201ENST00000406327 EDEM1Q92611 657 aa7.52□□□□□ -1.21
HMGB3P18-201ENST00000406327 FRMD6Q96NE9 622 aa7.52□□□□□ -1.21
HMGB3P18-201ENST00000406327 C8orf37Q96NL8 207 aa7.52□□□□□ -1.21
HMGB3P18-201ENST00000406327 GRIP2Q9C0E4 1043 aa7.52□□□□□ -1.21
HMGB3P18-201ENST00000406327 ZNF395Q9H8N7 513 aaPredicted RBP7.52□□□□□ -1.21
HMGB3P18-201ENST00000406327 ANKIB1Q9P2G1 1089 aa7.52□□□□□ -1.21
HMGB3P18-201ENST00000406327 TGFBR3LH3BV60 316 aa7.51□□□□□ -1.21
HMGB3P18-201ENST00000406327 SCAMP3O14828 347 aaKnown RBP7.51□□□□□ -1.21
HMGB3P18-201ENST00000406327 BMP1P13497 986 aa7.51□□□□□ -1.21
HMGB3P18-201ENST00000406327 TAGLNQ01995 201 aaKnown RBP7.51□□□□□ -1.21
HMGB3P18-201ENST00000406327 MRPL58Q14197 206 aaKnown RBP7.51□□□□□ -1.21
HMGB3P18-201ENST00000406327 ENOX2Q16206 610 aaKnown RBP7.51□□□□□ -1.21
HMGB3P18-201ENST00000406327 SH3PXD2AQ5TCZ1 1133 aa7.51□□□□□ -1.21
HMGB3P18-201ENST00000406327 IER5Q5VY09 327 aa7.51□□□□□ -1.21
HMGB3P18-201ENST00000406327 TMC4Q7Z404 712 aa7.51□□□□□ -1.21
HMGB3P18-201ENST00000406327 ATCAYQ86WG3 371 aa7.51□□□□□ -1.21
HMGB3P18-201ENST00000406327 TREML1Q86YW5 311 aa7.51□□□□□ -1.21
HMGB3P18-201ENST00000406327 PIK3R5Q8WYR1 880 aa7.51□□□□□ -1.21
HMGB3P18-201ENST00000406327 KLK14Q9P0G3 267 aa7.51□□□□□ -1.21
HMGB3P18-201ENST00000406327 USP35Q9P2H5 1018 aa7.51□□□□□ -1.21
HMGB3P18-201ENST00000406327 PARP3Q9Y6F1 533 aa7.51□□□□□ -1.21
HMGB3P18-201ENST00000406327 SPATA31C2B4DYI2 1134 aa7.5□□□□□ -1.21
HMGB3P18-201ENST00000406327 ZBTB39O15060 712 aa7.5□□□□□ -1.21
HMGB3P18-201ENST00000406327 CAPN5O15484 640 aaPredicted RBP7.5□□□□□ -1.21
HMGB3P18-201ENST00000406327 SORBS3O60504 671 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms