RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 LRP10Q7Z4F1 713 aa11.98□□□□□ -0.49
MSH2-202ENST00000406134 FOXD4L4Q8WXT5 416 aaPredicted RBP11.98□□□□□ -0.49
MSH2-202ENST00000406134 MEGF6O75095 1541 aa11.97□□□□□ -0.49
MSH2-202ENST00000406134 DDX60Q8IY21 1712 aaKnown RBP11.97□□□□□ -0.49
MSH2-202ENST00000406134 GADD45BO75293 160 aaPredicted RBP11.97□□□□□ -0.49
MSH2-202ENST00000406134 MCM2P49736 904 aa11.97□□□□□ -0.49
MSH2-202ENST00000406134 KIF1BPQ96EK5 621 aa11.97□□□□□ -0.49
MSH2-202ENST00000406134 JCADQ9P266 1359 aa11.97□□□□□ -0.49
MSH2-202ENST00000406134 GOLGA6L22H0YM25 854 aa11.97□□□□□ -0.49
MSH2-202ENST00000406134 PTH1RQ03431 593 aa11.97□□□□□ -0.49
MSH2-202ENST00000406134 NOL8Q76FK4 1167 aaKnown RBP11.97□□□□□ -0.49
MSH2-202ENST00000406134 NPHP4O75161 1426 aaPredicted RBP11.97□□□□□ -0.49
MSH2-202ENST00000406134 GCP02774 474 aa11.97□□□□□ -0.49
MSH2-202ENST00000406134 ZNF530Q6P9A1 599 aaPredicted RBP11.97□□□□□ -0.49
MSH2-202ENST00000406134 CWF19L2Q2TBE0 894 aaKnown RBP11.96□□□□□ -0.49
MSH2-202ENST00000406134 LRSAM1Q6UWE0 723 aa11.96□□□□□ -0.49
MSH2-202ENST00000406134 PA2G4Q9UQ80 394 aaKnown RBP11.96□□□□□ -0.49
MSH2-202ENST00000406134 CPA1P15085 419 aa11.96□□□□□ -0.5
MSH2-202ENST00000406134 ESCO1Q5FWF5 840 aa11.96□□□□□ -0.5
MSH2-202ENST00000406134 MAP3K2Q9Y2U5 619 aa11.96□□□□□ -0.5
MSH2-202ENST00000406134 SASH1O94885 1247 aa11.96□□□□□ -0.5
MSH2-202ENST00000406134 XPCQ01831 940 aaPredicted RBP11.96□□□□□ -0.5
MSH2-202ENST00000406134 ADCK5Q3MIX3 580 aa11.96□□□□□ -0.5
MSH2-202ENST00000406134 SYCE3A1L190 88 aa11.95□□□□□ -0.5
MSH2-202ENST00000406134 AK2P54819 239 aa11.95□□□□□ -0.5
MSH2-202ENST00000406134 KCNH5Q8NCM2 988 aa11.95□□□□□ -0.5
MSH2-202ENST00000406134 TTC41PQ6P2S7 1318 aa11.95□□□□□ -0.5
MSH2-202ENST00000406134 COL15A1P39059 1388 aa11.95□□□□□ -0.5
MSH2-202ENST00000406134 C1orf167Q5SNV9 1468 aa11.95□□□□□ -0.5
MSH2-202ENST00000406134 IGKV5-2P06315 115 aa11.95□□□□□ -0.5
MSH2-202ENST00000406134 TMEM87AQ8NBN3 555 aa11.95□□□□□ -0.5
MSH2-202ENST00000406134 SNRKQ9NRH2 765 aa11.95□□□□□ -0.5
MSH2-202ENST00000406134 C14orf37Q86TY3 774 aa11.94□□□□□ -0.5
MSH2-202ENST00000406134 SUCLG2Q96I99 432 aa11.94□□□□□ -0.5
MSH2-202ENST00000406134 LARP6Q9BRS8 491 aaKnown RBP11.94□□□□□ -0.5
MSH2-202ENST00000406134 SPG7Q9UQ90 795 aa11.94□□□□□ -0.5
MSH2-202ENST00000406134 DTNBO60941 627 aa11.94□□□□□ -0.5
MSH2-202ENST00000406134 ANKRD24Q8TF21 1146 aa11.94□□□□□ -0.5
MSH2-202ENST00000406134 GDPD2Q9HCC8 539 aa11.94□□□□□ -0.5
MSH2-202ENST00000406134 HYPKQ9NX55 129 aa11.94□□□□□ -0.5
MSH2-202ENST00000406134 TLR7Q9NYK1 1049 aaKnown RBP11.94□□□□□ -0.5
MSH2-202ENST00000406134 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.94□□□□□ -0.5
MSH2-202ENST00000406134 DBF4Q9UBU7 674 aaPredicted RBP11.94□□□□□ -0.5
MSH2-202ENST00000406134 CWC27Q6UX04 472 aaKnown RBP11.93□□□□□ -0.5
MSH2-202ENST00000406134 KSR2Q6VAB6 950 aa11.93□□□□□ -0.5
MSH2-202ENST00000406134 TAF6LQ9Y6J9 622 aa11.93□□□□□ -0.5
MSH2-202ENST00000406134 ERBB3P21860 1342 aa11.93□□□□□ -0.5
MSH2-202ENST00000406134 ABCA3Q99758 1704 aa11.93□□□□□ -0.5
MSH2-202ENST00000406134 PSME1Q06323 249 aa11.93□□□□□ -0.5
MSH2-202ENST00000406134 NECTIN1Q15223 517 aa11.93□□□□□ -0.5
MSH2-202ENST00000406134 ANKLE2Q86XL3 938 aa11.93□□□□□ -0.5
MSH2-202ENST00000406134 ALDH1L1O75891 902 aa11.92□□□□□ -0.5
MSH2-202ENST00000406134 MCCP23508 829 aa11.92□□□□□ -0.5
MSH2-202ENST00000406134 USP48Q86UV5 1035 aa11.92□□□□□ -0.5
MSH2-202ENST00000406134 NWD2Q9ULI1 1742 aa11.92□□□□□ -0.5
MSH2-202ENST00000406134 MED23Q9ULK4 1368 aa11.92□□□□□ -0.5
MSH2-202ENST00000406134 AMOTQ4VCS5 1084 aa11.92□□□□□ -0.5
MSH2-202ENST00000406134 TOGARAM1Q9Y4F4 1720 aa11.92□□□□□ -0.5
MSH2-202ENST00000406134 NCLP19338 710 aaKnown RBP11.92□□□□□ -0.5
MSH2-202ENST00000406134 PLEKHO1Q53GL0 409 aaPredicted RBP11.92□□□□□ -0.5
MSH2-202ENST00000406134 EPHA10Q5JZY3 1008 aa11.92□□□□□ -0.5
MSH2-202ENST00000406134 CNTROBQ8N137 903 aa11.92□□□□□ -0.5
MSH2-202ENST00000406134 EAF2Q96CJ1 260 aaPredicted RBP11.92□□□□□ -0.5
MSH2-202ENST00000406134 BICC1Q9H694 974 aaKnown RBP11.92□□□□□ -0.5
MSH2-202ENST00000406134 ZSCAN30Q86W11 494 aa11.91□□□□□ -0.5
MSH2-202ENST00000406134 TEFQ10587 303 aa11.91□□□□□ -0.5
MSH2-202ENST00000406134 ZSWIM6Q9HCJ5 1215 aa11.91□□□□□ -0.5
MSH2-202ENST00000406134 GLRX3O76003 335 aaKnown RBP11.9□□□□□ -0.5
MSH2-202ENST00000406134 FAM227BQ96M60 508 aa11.9□□□□□ -0.5
MSH2-202ENST00000406134 NOL7Q9UMY1 257 aaKnown RBP11.9□□□□□ -0.5
MSH2-202ENST00000406134 SYT1P21579 422 aa11.9□□□□□ -0.5
MSH2-202ENST00000406134 CNPY2Q9Y2B0 182 aa11.9□□□□□ -0.5
MSH2-202ENST00000406134 HS1BP3Q53T59 392 aa11.9□□□□□ -0.51
MSH2-202ENST00000406134 FUCA2Q9BTY2 467 aa11.9□□□□□ -0.51
MSH2-202ENST00000406134 ECHDC1Q9NTX5 307 aa11.9□□□□□ -0.51
MSH2-202ENST00000406134 GRM8O00222 908 aa11.89□□□□□ -0.51
MSH2-202ENST00000406134 RFX5P48382 616 aaPredicted RBP11.89□□□□□ -0.51
MSH2-202ENST00000406134 KLHDC4Q8TBB5 520 aa11.89□□□□□ -0.51
MSH2-202ENST00000406134 DDX21Q9NR30 783 aaKnown RBP eCLIP11.89□□□□□ -0.51
MSH2-202ENST00000406134 ZBTB7CA1YPR0 619 aa11.89□□□□□ -0.51
MSH2-202ENST00000406134 MBD3O95983 291 aa11.89□□□□□ -0.51
MSH2-202ENST00000406134 FOXD4L6Q3SYB3 417 aaPredicted RBP11.89□□□□□ -0.51
MSH2-202ENST00000406134 FOXD4L3Q6VB84 417 aaPredicted RBP11.89□□□□□ -0.51
MSH2-202ENST00000406134 CCDC171Q6TFL3 1326 aa11.89□□□□□ -0.51
MSH2-202ENST00000406134 A0A0D9SFI3 127 aa11.88□□□□□ -0.51
MSH2-202ENST00000406134 CASTP20810 708 aaKnown RBP11.88□□□□□ -0.51
MSH2-202ENST00000406134 LINS1Q8NG48 757 aa11.88□□□□□ -0.51
MSH2-202ENST00000406134 KCPQ6ZWJ8 1503 aa11.88□□□□□ -0.51
MSH2-202ENST00000406134 CHGBP05060 677 aa11.88□□□□□ -0.51
MSH2-202ENST00000406134 ZSCAN22P10073 491 aaPredicted RBP11.88□□□□□ -0.51
MSH2-202ENST00000406134 SLC39A6Q13433 755 aa11.88□□□□□ -0.51
MSH2-202ENST00000406134 ME3Q16798 604 aa11.88□□□□□ -0.51
MSH2-202ENST00000406134 LIMCH1Q9UPQ0 1083 aa11.88□□□□□ -0.51
MSH2-202ENST00000406134 WDR33Q9C0J8 1336 aaKnown RBP11.88□□□□□ -0.51
MSH2-202ENST00000406134 NEURL1BA8MQ27 555 aa11.88□□□□□ -0.51
MSH2-202ENST00000406134 ZNF500O60304 480 aaPredicted RBP11.88□□□□□ -0.51
MSH2-202ENST00000406134 MAP4K1Q92918 833 aa11.88□□□□□ -0.51
MSH2-202ENST00000406134 TRIM44Q96DX7 344 aaPredicted RBP11.88□□□□□ -0.51
MSH2-202ENST00000406134 MTMR6Q9Y217 621 aa11.88□□□□□ -0.51
MSH2-202ENST00000406134 TM6SF1Q9BZW5 370 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms