RNA–Protein interactions for RNA: ENST00000404583.5

CDPF1-203, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CDPF1, Length 1,439 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-203ENST00000404583 CHD4Q14839 1912 aa18.85■□□□□ 0.61
CDPF1-203ENST00000404583 POLRMTO00411 1230 aaKnown RBP18.84■□□□□ 0.61
CDPF1-203ENST00000404583 HLFQ16534 295 aa18.84■□□□□ 0.61
CDPF1-203ENST00000404583 TWISTNBQ3B726 338 aaPredicted RBP18.84■□□□□ 0.61
CDPF1-203ENST00000404583 MYH16Q9H6N6 1097 aa18.84■□□□□ 0.61
CDPF1-203ENST00000404583 EXOSC9Q06265 439 aaKnown RBP18.83■□□□□ 0.61
CDPF1-203ENST00000404583 KIF6Q6ZMV9 814 aa18.83■□□□□ 0.61
CDPF1-203ENST00000404583 DBF4Q9UBU7 674 aaPredicted RBP18.83■□□□□ 0.61
CDPF1-203ENST00000404583 NUP98P52948 1817 aa18.83■□□□□ 0.61
CDPF1-203ENST00000404583 AFDNP55196 1824 aaKnown RBP18.83■□□□□ 0.61
CDPF1-203ENST00000404583 MAP3K15Q6ZN16 1313 aa18.83■□□□□ 0.6
CDPF1-203ENST00000404583 AIMP1Q12904 312 aaKnown RBP18.83■□□□□ 0.6
CDPF1-203ENST00000404583 CLEC4GQ6UXB4 293 aa18.83■□□□□ 0.6
CDPF1-203ENST00000404583 COPS6Q7L5N1 327 aa18.83■□□□□ 0.6
CDPF1-203ENST00000404583 XAGE3Q8WTP9 111 aa18.83■□□□□ 0.6
CDPF1-203ENST00000404583 ZBTB3Q9H5J0 574 aa18.83■□□□□ 0.6
CDPF1-203ENST00000404583 ZNF652Q9Y2D9 606 aa18.83■□□□□ 0.6
CDPF1-203ENST00000404583 ERVV-1B6SEH8 477 aa18.82■□□□□ 0.6
CDPF1-203ENST00000404583 CCDC30Q5VVM6 783 aa18.82■□□□□ 0.6
CDPF1-203ENST00000404583 NLGN2Q8NFZ4 835 aa18.82■□□□□ 0.6
CDPF1-203ENST00000404583 CDCA7LQ96GN5 454 aa18.82■□□□□ 0.6
CDPF1-203ENST00000404583 TCERG1O14776 1098 aaKnown RBP18.81■□□□□ 0.6
CDPF1-203ENST00000404583 SERPINB2P05120 415 aa18.81■□□□□ 0.6
CDPF1-203ENST00000404583 PELP1Q8IZL8 1130 aaKnown RBP18.81■□□□□ 0.6
CDPF1-203ENST00000404583 SETDB2Q96T68 719 aa18.81■□□□□ 0.6
CDPF1-203ENST00000404583 CD2APQ9Y5K6 639 aa18.81■□□□□ 0.6
CDPF1-203ENST00000404583 E9PSI1 815 aa18.8■□□□□ 0.6
CDPF1-203ENST00000404583 VAMP4O75379 141 aa18.8■□□□□ 0.6
CDPF1-203ENST00000404583 SLFN5Q08AF3 891 aa18.8■□□□□ 0.6
CDPF1-203ENST00000404583 HYPKQ9NX55 129 aa18.8■□□□□ 0.6
CDPF1-203ENST00000404583 KIF13BQ9NQT8 1826 aa18.79■□□□□ 0.6
CDPF1-203ENST00000404583 RGL2O15211 777 aa18.79■□□□□ 0.6
CDPF1-203ENST00000404583 HNRNPUQ00839 825 aaKnown RBP eCLIP18.79■□□□□ 0.6
CDPF1-203ENST00000404583 CHMP4AQ9BY43 222 aa18.79■□□□□ 0.6
CDPF1-203ENST00000404583 PHAXQ9H814 394 aaKnown RBP18.79■□□□□ 0.6
CDPF1-203ENST00000404583 NIP7Q9Y221 180 aaKnown RBP eCLIP18.79■□□□□ 0.6
CDPF1-203ENST00000404583 NRXN2Q9P2S2 1712 aa18.79■□□□□ 0.6
CDPF1-203ENST00000404583 GPR162Q16538 588 aa18.78■□□□□ 0.6
CDPF1-203ENST00000404583 GIGYF2Q6Y7W6 1299 aaKnown RBP18.78■□□□□ 0.6
CDPF1-203ENST00000404583 CARMIL3Q8ND23 1372 aa18.78■□□□□ 0.6
CDPF1-203ENST00000404583 C10orf71Q711Q0 1435 aa18.77■□□□□ 0.6
CDPF1-203ENST00000404583 STK31Q9BXU1 1019 aa18.76■□□□□ 0.59
CDPF1-203ENST00000404583 N4BP2Q86UW6 1770 aaPredicted RBP18.76■□□□□ 0.59
CDPF1-203ENST00000404583 FAM177BA6PVY3 158 aa18.75■□□□□ 0.59
CDPF1-203ENST00000404583 GPTP24298 496 aa18.75■□□□□ 0.59
CDPF1-203ENST00000404583 ANKRD13DQ6ZTN6 518 aa18.75■□□□□ 0.59
CDPF1-203ENST00000404583 TRMT2AQ8IZ69 625 aaKnown RBP18.75■□□□□ 0.59
CDPF1-203ENST00000404583 CCDC24Q8N4L8 307 aa18.75■□□□□ 0.59
CDPF1-203ENST00000404583 CACNA1FO60840 1977 aa18.75■□□□□ 0.59
CDPF1-203ENST00000404583 SLC4A2P04920 1241 aa18.74■□□□□ 0.59
CDPF1-203ENST00000404583 PRR5LQ6MZQ0 368 aa18.74■□□□□ 0.59
CDPF1-203ENST00000404583 ZNF784Q8NCA9 323 aaPredicted RBP18.74■□□□□ 0.59
CDPF1-203ENST00000404583 PLBD2Q8NHP8 589 aa18.74■□□□□ 0.59
CDPF1-203ENST00000404583 TGFB2P61812 414 aa18.74■□□□□ 0.59
CDPF1-203ENST00000404583 NBPF5PQ86XG9 351 aaPredicted RBP18.74■□□□□ 0.59
CDPF1-203ENST00000404583 ZNF34Q8IZ26 560 aa18.74■□□□□ 0.59
CDPF1-203ENST00000404583 ATP10DQ9P241 1426 aa18.73■□□□□ 0.59
CDPF1-203ENST00000404583 KIAA1551Q9HCM1 1747 aa18.73■□□□□ 0.59
CDPF1-203ENST00000404583 A0A0G2JLW4 131 aa18.73■□□□□ 0.59
CDPF1-203ENST00000404583 NPHP1O15259 732 aa18.73■□□□□ 0.59
CDPF1-203ENST00000404583 G2E3Q7L622 706 aa18.73■□□□□ 0.59
CDPF1-203ENST00000404583 CNBD1Q8NA66 436 aa18.73■□□□□ 0.59
CDPF1-203ENST00000404583 UBN2Q6ZU65 1347 aa18.73■□□□□ 0.59
CDPF1-203ENST00000404583 ANKRD36CQ5JPF3 1778 aa18.72■□□□□ 0.59
CDPF1-203ENST00000404583 TCIRG1Q13488 830 aa18.72■□□□□ 0.59
CDPF1-203ENST00000404583 RIC3Q7Z5B4 369 aa18.72■□□□□ 0.59
CDPF1-203ENST00000404583 WWC3Q9ULE0 1092 aa18.72■□□□□ 0.59
CDPF1-203ENST00000404583 PXDNLA1KZ92 1463 aa18.72■□□□□ 0.59
CDPF1-203ENST00000404583 ARFGEF2Q9Y6D5 1785 aa18.72■□□□□ 0.59
CDPF1-203ENST00000404583 ANKRD31Q8N7Z5 1873 aa18.72■□□□□ 0.59
CDPF1-203ENST00000404583 DPEP1P16444 411 aa18.71■□□□□ 0.59
CDPF1-203ENST00000404583 HSP90AB3PQ58FF7 597 aa18.71■□□□□ 0.59
CDPF1-203ENST00000404583 SUSD4Q5VX71 490 aa18.71■□□□□ 0.59
CDPF1-203ENST00000404583 TPTE2Q6XPS3 522 aa18.71■□□□□ 0.59
CDPF1-203ENST00000404583 YBX3P16989 372 aaKnown RBP eCLIP18.7■□□□□ 0.58
CDPF1-203ENST00000404583 CHRNA5P30532 468 aa18.7■□□□□ 0.58
CDPF1-203ENST00000404583 ST5P78524 1137 aa18.7■□□□□ 0.58
CDPF1-203ENST00000404583 DDX58O95786 925 aaKnown RBP18.69■□□□□ 0.58
CDPF1-203ENST00000404583 KCNA3P22001 575 aa18.69■□□□□ 0.58
CDPF1-203ENST00000404583 ZNF428Q96B54 188 aa18.69■□□□□ 0.58
CDPF1-203ENST00000404583 BRIP1Q9BX63 1249 aa18.69■□□□□ 0.58
CDPF1-203ENST00000404583 ATP5J2-PTCD1G3V325 749 aa18.68■□□□□ 0.58
CDPF1-203ENST00000404583 GTF2E1P29083 439 aaPredicted RBP18.68■□□□□ 0.58
CDPF1-203ENST00000404583 PARP10Q53GL7 1025 aa18.68■□□□□ 0.58
CDPF1-203ENST00000404583 NUTM1Q86Y26 1132 aa18.68■□□□□ 0.58
CDPF1-203ENST00000404583 NYXQ9GZU5 481 aa18.68■□□□□ 0.58
CDPF1-203ENST00000404583 PI4KAP2A4QPH2 592 aa18.67■□□□□ 0.58
CDPF1-203ENST00000404583 FLIIQ13045 1269 aa18.67■□□□□ 0.58
CDPF1-203ENST00000404583 KSR2Q6VAB6 950 aa18.67■□□□□ 0.58
CDPF1-203ENST00000404583 PPP1R42Q7Z4L9 355 aa18.67■□□□□ 0.58
CDPF1-203ENST00000404583 NLRP10Q86W26 655 aa18.67■□□□□ 0.58
CDPF1-203ENST00000404583 PI4KAP1Q8N8J0 262 aa18.67■□□□□ 0.58
CDPF1-203ENST00000404583 ISCA1Q9BUE6 129 aa18.67■□□□□ 0.58
CDPF1-203ENST00000404583 BRCA1P38398 1863 aaKnown RBP18.67■□□□□ 0.58
CDPF1-203ENST00000404583 ZBED9Q6R2W3 1325 aa18.67■□□□□ 0.58
CDPF1-203ENST00000404583 NTSR2O95665 410 aa18.66■□□□□ 0.58
CDPF1-203ENST00000404583 PDE6BP35913 854 aa18.66■□□□□ 0.58
CDPF1-203ENST00000404583 ERFEQ4G0M1 354 aa18.66■□□□□ 0.58
CDPF1-203ENST00000404583 C2CD5Q86YS7 1000 aa18.66■□□□□ 0.58
CDPF1-203ENST00000404583 MYD88Q99836 296 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms