RNA–Protein interactions for RNA: ENST00000402434.6

RTN4-207, Transcript of reticulon 4, humanhuman

TSL 5 BASIC

Gene RTN4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-207ENST00000402434 MAP3K15Q6ZN16 1313 aa24.89■■□□□ 1.57
RTN4-207ENST00000402434 HLFQ16534 295 aa24.89■■□□□ 1.57
RTN4-207ENST00000402434 SETDB2Q96T68 719 aa24.89■■□□□ 1.57
RTN4-207ENST00000402434 NRXN2Q9P2S2 1712 aa24.89■■□□□ 1.57
RTN4-207ENST00000402434 ANXA1P04083 346 aa24.88■■□□□ 1.57
RTN4-207ENST00000402434 DBF4Q9UBU7 674 aaPredicted RBP24.88■■□□□ 1.57
RTN4-207ENST00000402434 AFDNP55196 1824 aaKnown RBP24.87■■□□□ 1.57
RTN4-207ENST00000402434 CARMIL3Q8ND23 1372 aa24.87■■□□□ 1.57
RTN4-207ENST00000402434 ZNF521Q96K83 1311 aa24.87■■□□□ 1.57
RTN4-207ENST00000402434 ELL2O00472 640 aaPredicted RBP24.87■■□□□ 1.57
RTN4-207ENST00000402434 KIF6Q6ZMV9 814 aa24.87■■□□□ 1.57
RTN4-207ENST00000402434 CHPF2Q9P2E5 772 aa24.87■■□□□ 1.57
RTN4-207ENST00000402434 PXDNLA1KZ92 1463 aa24.86■■□□□ 1.57
RTN4-207ENST00000402434 TSPYL6Q8N831 410 aa24.85■■□□□ 1.57
RTN4-207ENST00000402434 FANCIQ9NVI1 1328 aa24.85■■□□□ 1.57
RTN4-207ENST00000402434 COPS6Q7L5N1 327 aa24.84■■□□□ 1.57
RTN4-207ENST00000402434 CHMP4AQ9BY43 222 aa24.84■■□□□ 1.57
RTN4-207ENST00000402434 SPINK5Q9NQ38 1064 aaPredicted RBP24.84■■□□□ 1.57
RTN4-207ENST00000402434 GPR162Q16538 588 aa24.83■■□□□ 1.57
RTN4-207ENST00000402434 XAGE3Q8WTP9 111 aa24.83■■□□□ 1.57
RTN4-207ENST00000402434 ZBTB3Q9H5J0 574 aa24.83■■□□□ 1.57
RTN4-207ENST00000402434 KIAA1551Q9HCM1 1747 aa24.83■■□□□ 1.57
RTN4-207ENST00000402434 A0A0G2JLW4 131 aa24.83■■□□□ 1.56
RTN4-207ENST00000402434 GIGYF2Q6Y7W6 1299 aaKnown RBP24.83■■□□□ 1.56
RTN4-207ENST00000402434 HYPKQ9NX55 129 aa24.83■■□□□ 1.56
RTN4-207ENST00000402434 NIP7Q9Y221 180 aaKnown RBP eCLIP24.83■■□□□ 1.56
RTN4-207ENST00000402434 NUP98P52948 1817 aa24.82■■□□□ 1.56
RTN4-207ENST00000402434 GOLGB1Q14789 3259 aaKnown RBP24.82■■□□□ 1.56
RTN4-207ENST00000402434 DPEP1P16444 411 aa24.82■■□□□ 1.56
RTN4-207ENST00000402434 PRR5LQ6MZQ0 368 aa24.82■■□□□ 1.56
RTN4-207ENST00000402434 ATP10DQ9P241 1426 aa24.81■■□□□ 1.56
RTN4-207ENST00000402434 YBX3P16989 372 aaKnown RBP eCLIP24.81■■□□□ 1.562e-23■□□□□ 9.5
RTN4-207ENST00000402434 KCNA3P22001 575 aa24.81■■□□□ 1.56
RTN4-207ENST00000402434 MYH16Q9H6N6 1097 aa24.81■■□□□ 1.56
RTN4-207ENST00000402434 GOLGA2Q08379 1002 aa24.8■■□□□ 1.56
RTN4-207ENST00000402434 AIMP1Q12904 312 aaKnown RBP24.8■■□□□ 1.56
RTN4-207ENST00000402434 TWISTNBQ3B726 338 aaPredicted RBP24.8■■□□□ 1.56
RTN4-207ENST00000402434 CCDC30Q5VVM6 783 aa24.8■■□□□ 1.56
RTN4-207ENST00000402434 CNBD1Q8NA66 436 aa24.8■■□□□ 1.56
RTN4-207ENST00000402434 N4BP2Q86UW6 1770 aaPredicted RBP24.79■■□□□ 1.56
RTN4-207ENST00000402434 NBPF5PQ86XG9 351 aaPredicted RBP24.79■■□□□ 1.56
RTN4-207ENST00000402434 ZNF34Q8IZ26 560 aa24.79■■□□□ 1.56
RTN4-207ENST00000402434 UTRNP46939 3433 aa24.79■■□□□ 1.56
RTN4-207ENST00000402434 PELP1Q8IZL8 1130 aaKnown RBP24.78■■□□□ 1.56
RTN4-207ENST00000402434 BRIP1Q9BX63 1249 aa24.78■■□□□ 1.56
RTN4-207ENST00000402434 TPTE2Q6XPS3 522 aa24.77■■□□□ 1.56
RTN4-207ENST00000402434 GRIN3BO60391 1043 aa24.76■■□□□ 1.55
RTN4-207ENST00000402434 CHRNA5P30532 468 aa24.76■■□□□ 1.55
RTN4-207ENST00000402434 EXOSC9Q06265 439 aaKnown RBP24.76■■□□□ 1.55
RTN4-207ENST00000402434 ANKRD13DQ6ZTN6 518 aa24.76■■□□□ 1.55
RTN4-207ENST00000402434 PLBD2Q8NHP8 589 aa24.76■■□□□ 1.55
RTN4-207ENST00000402434 UBN2Q6ZU65 1347 aa24.75■■□□□ 1.55
RTN4-207ENST00000402434 VAMP4O75379 141 aa24.75■■□□□ 1.55
RTN4-207ENST00000402434 ST5P78524 1137 aa24.75■■□□□ 1.55
RTN4-207ENST00000402434 CCDC24Q8N4L8 307 aa24.75■■□□□ 1.55
RTN4-207ENST00000402434 PIM2Q9P1W9 311 aa24.75■■□□□ 1.55
RTN4-207ENST00000402434 PDZRN3Q9UPQ7 1066 aa24.75■■□□□ 1.55
RTN4-207ENST00000402434 BRCA1P38398 1863 aaKnown RBP24.74■■□□□ 1.55
RTN4-207ENST00000402434 NPHP1O15259 732 aa24.74■■□□□ 1.55
RTN4-207ENST00000402434 GPTP24298 496 aa24.74■■□□□ 1.55
RTN4-207ENST00000402434 PDE6BP35913 854 aa24.74■■□□□ 1.55
RTN4-207ENST00000402434 HSP90AB3PQ58FF7 597 aa24.74■■□□□ 1.55
RTN4-207ENST00000402434 PHAXQ9H814 394 aaKnown RBP24.74■■□□□ 1.55
RTN4-207ENST00000402434 ANKRD31Q8N7Z5 1873 aa24.73■■□□□ 1.55
RTN4-207ENST00000402434 TCIRG1Q13488 830 aa24.73■■□□□ 1.55
RTN4-207ENST00000402434 PARP10Q53GL7 1025 aa24.73■■□□□ 1.55
RTN4-207ENST00000402434 NYXQ9GZU5 481 aa24.73■■□□□ 1.55
RTN4-207ENST00000402434 WWC3Q9ULE0 1092 aa24.73■■□□□ 1.55
RTN4-207ENST00000402434 IBTKQ9P2D0 1353 aaPredicted RBP24.73■■□□□ 1.55
RTN4-207ENST00000402434 E9PSI1 815 aa24.71■■□□□ 1.55
RTN4-207ENST00000402434 H0YIN7 160 aa24.71■■□□□ 1.55
RTN4-207ENST00000402434 SUSD4Q5VX71 490 aa24.71■■□□□ 1.55
RTN4-207ENST00000402434 C2CD5Q86YS7 1000 aa24.71■■□□□ 1.55
RTN4-207ENST00000402434 STK31Q9BXU1 1019 aa24.71■■□□□ 1.55
RTN4-207ENST00000402434 KLRG2A4D1S0 409 aaPredicted RBP24.7■■□□□ 1.55
RTN4-207ENST00000402434 FAM177BA6PVY3 158 aa24.7■■□□□ 1.55
RTN4-207ENST00000402434 BCS1LQ9Y276 419 aa24.7■■□□□ 1.55
RTN4-207ENST00000402434 SLFN5Q08AF3 891 aa24.7■■□□□ 1.54
RTN4-207ENST00000402434 DALRD3Q5D0E6 543 aaKnown RBP24.7■■□□□ 1.54
RTN4-207ENST00000402434 NTSR2O95665 410 aa24.69■■□□□ 1.54
RTN4-207ENST00000402434 GTF2E1P29083 439 aaPredicted RBP24.69■■□□□ 1.54
RTN4-207ENST00000402434 PPP1R42Q7Z4L9 355 aa24.69■■□□□ 1.54
RTN4-207ENST00000402434 NLRP10Q86W26 655 aa24.69■■□□□ 1.54
RTN4-207ENST00000402434 TCERG1O14776 1098 aaKnown RBP24.68■■□□□ 1.54
RTN4-207ENST00000402434 SLC4A2P04920 1241 aa24.68■■□□□ 1.54
RTN4-207ENST00000402434 DLEC1Q9Y238 1755 aa24.68■■□□□ 1.54
RTN4-207ENST00000402434 SRGNP10124 158 aa24.67■■□□□ 1.54
RTN4-207ENST00000402434 RIC3Q7Z5B4 369 aa24.67■■□□□ 1.54
RTN4-207ENST00000402434 NUTM1Q86Y26 1132 aa24.67■■□□□ 1.54
RTN4-207ENST00000402434 ISCA1Q9BUE6 129 aa24.67■■□□□ 1.54
RTN4-207ENST00000402434 ANKRD36CQ5JPF3 1778 aa24.67■■□□□ 1.54
RTN4-207ENST00000402434 TRIM28Q13263 835 aaKnown RBP24.66■■□□□ 1.54
RTN4-207ENST00000402434 ERFEQ4G0M1 354 aa24.66■■□□□ 1.54
RTN4-207ENST00000402434 TRMT2AQ8IZ69 625 aaKnown RBP24.66■■□□□ 1.54
RTN4-207ENST00000402434 CDCA7LQ96GN5 454 aa24.66■■□□□ 1.54
RTN4-207ENST00000402434 UTP14AQ9BVJ6 771 aaKnown RBP24.66■■□□□ 1.54
RTN4-207ENST00000402434 RNF123Q5XPI4 1314 aa24.65■■□□□ 1.54
RTN4-207ENST00000402434 CACNA1FO60840 1977 aa24.65■■□□□ 1.54
RTN4-207ENST00000402434 CHD4Q14839 1912 aa24.65■■□□□ 1.54
RTN4-207ENST00000402434 DDX58O95786 925 aaKnown RBP24.65■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms