RNA–Protein interactions for RNA: ENST00000401522.7

CHRFAM7A-203, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 1 (best) BASIC

Gene CHRFAM7A, Length 1,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-203ENST00000401522 SLC27A3Q5K4L6 730 aa19.7■□□□□ 0.74
CHRFAM7A-203ENST00000401522 SIRT2Q8IXJ6 389 aa19.7■□□□□ 0.74
CHRFAM7A-203ENST00000401522 CCNL1Q9UK58 526 aaPredicted RBP19.7■□□□□ 0.74
CHRFAM7A-203ENST00000401522 NECTIN2Q92692 538 aa19.7■□□□□ 0.74
CHRFAM7A-203ENST00000401522 EIF5BO60841 1220 aaKnown RBP19.69■□□□□ 0.74
CHRFAM7A-203ENST00000401522 MCM4P33991 863 aa19.69■□□□□ 0.74
CHRFAM7A-203ENST00000401522 PROM2Q8N271 834 aa19.69■□□□□ 0.74
CHRFAM7A-203ENST00000401522 STK31Q9BXU1 1019 aa19.69■□□□□ 0.74
CHRFAM7A-203ENST00000401522 DBF4Q9UBU7 674 aaPredicted RBP19.69■□□□□ 0.74
CHRFAM7A-203ENST00000401522 ERBB4Q15303 1308 aa19.69■□□□□ 0.74
CHRFAM7A-203ENST00000401522 PDIA6Q15084 440 aa19.68■□□□□ 0.74
CHRFAM7A-203ENST00000401522 RGPD3A6NKT7 1758 aaPredicted RBP19.68■□□□□ 0.74
CHRFAM7A-203ENST00000401522 RGPD4Q7Z3J3 1758 aa19.68■□□□□ 0.74
CHRFAM7A-203ENST00000401522 SLC4A2P04920 1241 aa19.68■□□□□ 0.74
CHRFAM7A-203ENST00000401522 SF3B2Q13435 895 aaKnown RBP19.68■□□□□ 0.74
CHRFAM7A-203ENST00000401522 INTS3Q68E01 1043 aaKnown RBP19.68■□□□□ 0.74
CHRFAM7A-203ENST00000401522 CHPF2Q9P2E5 772 aa19.68■□□□□ 0.74
CHRFAM7A-203ENST00000401522 KCNQ4P56696 695 aa19.67■□□□□ 0.74
CHRFAM7A-203ENST00000401522 TXNRD1Q16881 649 aa19.67■□□□□ 0.74
CHRFAM7A-203ENST00000401522 L1TD1Q5T7N2 865 aaKnown RBP19.67■□□□□ 0.74
CHRFAM7A-203ENST00000401522 SPRYD3Q8NCJ5 442 aa19.67■□□□□ 0.74
CHRFAM7A-203ENST00000401522 DDX21Q9NR30 783 aaKnown RBP eCLIP19.67■□□□□ 0.74
CHRFAM7A-203ENST00000401522 LRRC4BQ9NT99 713 aa19.67■□□□□ 0.74
CHRFAM7A-203ENST00000401522 COL5A3P25940 1745 aaPredicted RBP19.67■□□□□ 0.74
CHRFAM7A-203ENST00000401522 A1BGP04217 495 aa19.66■□□□□ 0.74
CHRFAM7A-203ENST00000401522 HMGB2P26583 209 aaKnown RBP19.66■□□□□ 0.74
CHRFAM7A-203ENST00000401522 LINC00116Q8NCU8 138 aa19.66■□□□□ 0.74
CHRFAM7A-203ENST00000401522 CACNA1FO60840 1977 aa19.66■□□□□ 0.74
CHRFAM7A-203ENST00000401522 NBPF26B4DH59 902 aa19.65■□□□□ 0.74
CHRFAM7A-203ENST00000401522 NBPF14Q5TI25 921 aa19.65■□□□□ 0.74
CHRFAM7A-203ENST00000401522 NBPF10Q6P3W6 841 aaKnown RBP19.65■□□□□ 0.74
CHRFAM7A-203ENST00000401522 NBPF15Q8N660 670 aa19.65■□□□□ 0.74
CHRFAM7A-203ENST00000401522 CAMKK2Q96RR4 588 aa19.65■□□□□ 0.74
CHRFAM7A-203ENST00000401522 HYPKQ9NX55 129 aa19.65■□□□□ 0.74
CHRFAM7A-203ENST00000401522 CRKLP46109 303 aaKnown RBP19.64■□□□□ 0.74
CHRFAM7A-203ENST00000401522 INTS5Q6P9B9 1019 aaKnown RBP19.64■□□□□ 0.74
CHRFAM7A-203ENST00000401522 TBC1D9Q6ZT07 1266 aa19.64■□□□□ 0.74
CHRFAM7A-203ENST00000401522 LRP10Q7Z4F1 713 aa19.64■□□□□ 0.74
CHRFAM7A-203ENST00000401522 DDIT3P35638 169 aa19.64■□□□□ 0.73
CHRFAM7A-203ENST00000401522 BAG6P46379 1132 aa19.64■□□□□ 0.73
CHRFAM7A-203ENST00000401522 PROSER3Q2NL68 480 aa19.64■□□□□ 0.73
CHRFAM7A-203ENST00000401522 RC3H1Q5TC82 1133 aaKnown RBP19.64■□□□□ 0.73
CHRFAM7A-203ENST00000401522 DCTPP1Q9H773 170 aa19.64■□□□□ 0.73
CHRFAM7A-203ENST00000401522 CCDC87Q9NVE4 849 aa19.64■□□□□ 0.73
CHRFAM7A-203ENST00000401522 CIZ1Q9ULV3 898 aaPredicted RBP19.64■□□□□ 0.73
CHRFAM7A-203ENST00000401522 TAF1LQ8IZX4 1826 aa19.64■□□□□ 0.73
CHRFAM7A-203ENST00000401522 CNTNAP4Q9C0A0 1308 aa19.64■□□□□ 0.73
CHRFAM7A-203ENST00000401522 CDC45O75419 566 aa19.63■□□□□ 0.73
CHRFAM7A-203ENST00000401522 EN1Q05925 392 aaPredicted RBP19.63■□□□□ 0.73
CHRFAM7A-203ENST00000401522 RTN4Q9NQC3 1192 aaKnown RBP19.63■□□□□ 0.73
CHRFAM7A-203ENST00000401522 PTPRCP08575 1304 aa19.63■□□□□ 0.73
CHRFAM7A-203ENST00000401522 RREB1Q92766 1687 aa19.62■□□□□ 0.73
CHRFAM7A-203ENST00000401522 ANXA1P04083 346 aa19.62■□□□□ 0.73
CHRFAM7A-203ENST00000401522 MYL6BP14649 208 aa19.62■□□□□ 0.73
CHRFAM7A-203ENST00000401522 PIP4K2AP48426 406 aaPredicted RBP19.62■□□□□ 0.73
CHRFAM7A-203ENST00000401522 ILDR2Q71H61 639 aa19.62■□□□□ 0.73
CHRFAM7A-203ENST00000401522 ANKRD44Q8N8A2 993 aa19.62■□□□□ 0.73
CHRFAM7A-203ENST00000401522 ZBTB1Q9Y2K1 713 aa19.62■□□□□ 0.73
CHRFAM7A-203ENST00000401522 DDX11L8A8MPP1 907 aa19.61■□□□□ 0.73
CHRFAM7A-203ENST00000401522 IL6STP40189 918 aaPredicted RBP19.61■□□□□ 0.73
CHRFAM7A-203ENST00000401522 G2E3Q7L622 706 aa19.61■□□□□ 0.73
CHRFAM7A-203ENST00000401522 RPAP2Q8IXW5 612 aaPredicted RBP19.61■□□□□ 0.73
CHRFAM7A-203ENST00000401522 PHAXQ9H814 394 aaKnown RBP19.61■□□□□ 0.73
CHRFAM7A-203ENST00000401522 MYH14Q7Z406 1995 aaKnown RBP19.61■□□□□ 0.73
CHRFAM7A-203ENST00000401522 FLIIQ13045 1269 aa19.61■□□□□ 0.73
CHRFAM7A-203ENST00000401522 EZH2Q15910 746 aaKnown RBP19.61■□□□□ 0.73
CHRFAM7A-203ENST00000401522 UPF1Q92900 1129 aaKnown RBP eCLIP19.61■□□□□ 0.73
CHRFAM7A-203ENST00000401522 KIF2CQ99661 725 aa19.61■□□□□ 0.73
CHRFAM7A-203ENST00000401522 ATP10DQ9P241 1426 aa19.6■□□□□ 0.73
CHRFAM7A-203ENST00000401522 C4BP0C0L5 1744 aa19.6■□□□□ 0.73
CHRFAM7A-203ENST00000401522 DEFB132Q7Z7B7 95 aa19.59■□□□□ 0.73
CHRFAM7A-203ENST00000401522 PLEKHM2Q8IWE5 1019 aa19.59■□□□□ 0.73
CHRFAM7A-203ENST00000401522 EIF5P55010 431 aaKnown RBP19.59■□□□□ 0.73
CHRFAM7A-203ENST00000401522 COPS6Q7L5N1 327 aa19.58■□□□□ 0.72
CHRFAM7A-203ENST00000401522 TRAK2O60296 914 aa19.57■□□□□ 0.72
CHRFAM7A-203ENST00000401522 RPS6KA4O75676 772 aa19.57■□□□□ 0.72
CHRFAM7A-203ENST00000401522 XAGE3Q8WTP9 111 aa19.57■□□□□ 0.72
CHRFAM7A-203ENST00000401522 GSPT1P15170 499 aaKnown RBP19.57■□□□□ 0.72
CHRFAM7A-203ENST00000401522 TTC22Q5TAA0 569 aa19.57■□□□□ 0.72
CHRFAM7A-203ENST00000401522 CEP85Q6P2H3 762 aa19.57■□□□□ 0.72
CHRFAM7A-203ENST00000401522 FKBP5Q13451 457 aaPredicted RBP19.56■□□□□ 0.72
CHRFAM7A-203ENST00000401522 FSD2A1L4K1 749 aa19.55■□□□□ 0.72
CHRFAM7A-203ENST00000401522 GOLGA6L3A6NEY3 463 aa19.55■□□□□ 0.72
CHRFAM7A-203ENST00000401522 K7ELQ4 463 aaPredicted RBP19.55■□□□□ 0.72
CHRFAM7A-203ENST00000401522 GNPATO15228 680 aa19.55■□□□□ 0.72
CHRFAM7A-203ENST00000401522 AIMP1Q12904 312 aaKnown RBP19.55■□□□□ 0.72
CHRFAM7A-203ENST00000401522 AK7Q96M32 723 aa19.55■□□□□ 0.72
CHRFAM7A-203ENST00000401522 DDX58O95786 925 aaKnown RBP19.55■□□□□ 0.72
CHRFAM7A-203ENST00000401522 FAM43AQ8N2R8 423 aa19.55■□□□□ 0.72
CHRFAM7A-203ENST00000401522 AKT1S1Q96B36 256 aa19.55■□□□□ 0.72
CHRFAM7A-203ENST00000401522 RTCBQ9Y3I0 505 aaKnown RBP19.55■□□□□ 0.72
CHRFAM7A-203ENST00000401522 PTMSP20962 102 aa19.54■□□□□ 0.72
CHRFAM7A-203ENST00000401522 ANKRD13DQ6ZTN6 518 aa19.54■□□□□ 0.72
CHRFAM7A-203ENST00000401522 ZNF330Q9Y3S2 320 aaPredicted RBP19.54■□□□□ 0.72
CHRFAM7A-203ENST00000401522 RAB3GAP1Q15042 981 aa19.53■□□□□ 0.72
CHRFAM7A-203ENST00000401522 KSR2Q6VAB6 950 aa19.53■□□□□ 0.72
CHRFAM7A-203ENST00000401522 TTLL7Q6ZT98 887 aa19.53■□□□□ 0.72
CHRFAM7A-203ENST00000401522 GBP4Q96PP9 640 aa19.53■□□□□ 0.72
CHRFAM7A-203ENST00000401522 A0A087WZG4 1122 aa19.53■□□□□ 0.72
CHRFAM7A-203ENST00000401522 PI4KAP2A4QPH2 592 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms