RNA–Protein interactions for RNA: ENST00000401408.5

CLHC1-201, Transcript of clathrin heavy chain linker domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLHC1, Length 2,248 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1-201ENST00000401408 POU5F1Q01860 360 aaKnown RBP4.94□□□□□ -1.62
CLHC1-201ENST00000401408 HDAC1Q13547 482 aaPredicted RBP4.94□□□□□ -1.62
CLHC1-201ENST00000401408 ICE2Q659A1 982 aa4.94□□□□□ -1.62
CLHC1-201ENST00000401408 FILIP1Q7Z7B0 1213 aa4.94□□□□□ -1.62
CLHC1-201ENST00000401408 RPUSD2Q8IZ73 545 aaKnown RBP4.94□□□□□ -1.62
CLHC1-201ENST00000401408 PDILTQ8N807 584 aa4.94□□□□□ -1.62
CLHC1-201ENST00000401408 MTMR14Q8NCE2 650 aa4.94□□□□□ -1.62
CLHC1-201ENST00000401408 DDX27Q96GQ7 796 aaKnown RBP4.94□□□□□ -1.62
CLHC1-201ENST00000401408 PAGR1Q9BTK6 254 aa4.94□□□□□ -1.62
CLHC1-201ENST00000401408 DMGDHQ9UI17 866 aaKnown RBP4.94□□□□□ -1.62
CLHC1-201ENST00000401408 SUZ12Q15022 739 aaKnown RBP4.93□□□□□ -1.62
CLHC1-201ENST00000401408 JAZF1Q86VZ6 243 aa4.93□□□□□ -1.62
CLHC1-201ENST00000401408 C1orf131Q8NDD1 294 aaKnown RBP4.93□□□□□ -1.62
CLHC1-201ENST00000401408 SLC26A8Q96RN1 970 aa4.93□□□□□ -1.62
CLHC1-201ENST00000401408 NAP1L4Q99733 375 aaKnown RBP4.93□□□□□ -1.62
CLHC1-201ENST00000401408 MFRPQ9BY79 579 aa4.93□□□□□ -1.62
CLHC1-201ENST00000401408 BACH2Q9BYV9 841 aa4.93□□□□□ -1.62
CLHC1-201ENST00000401408 INO80BQ9C086 356 aaPredicted RBP4.93□□□□□ -1.62
CLHC1-201ENST00000401408 IFT57Q9NWB7 429 aa4.93□□□□□ -1.62
CLHC1-201ENST00000401408 SFMBT1Q9UHJ3 866 aa4.93□□□□□ -1.62
CLHC1-201ENST00000401408 PCDHB13Q9Y5F0 798 aa4.93□□□□□ -1.62
CLHC1-201ENST00000401408 EID1Q9Y6B2 187 aa4.93□□□□□ -1.62
CLHC1-201ENST00000401408 MYO5BQ9ULV0 1848 aa4.93□□□□□ -1.62
CLHC1-201ENST00000401408 PALM3A6NDB9 673 aaPredicted RBP4.93□□□□□ -1.62
CLHC1-201ENST00000401408 SOWAHDA6NJG2 315 aa4.93□□□□□ -1.62
CLHC1-201ENST00000401408 RFC5P40937 340 aa4.93□□□□□ -1.62
CLHC1-201ENST00000401408 SETDB1Q15047 1291 aa4.93□□□□□ -1.62
CLHC1-201ENST00000401408 PCGF5Q86SE9 256 aa4.93□□□□□ -1.62
CLHC1-201ENST00000401408 MSL3Q8N5Y2 521 aaKnown RBP4.93□□□□□ -1.62
CLHC1-201ENST00000401408 CEP120Q8N960 986 aa4.93□□□□□ -1.62
CLHC1-201ENST00000401408 STAG1Q8WVM7 1258 aa4.93□□□□□ -1.62
CLHC1-201ENST00000401408 JDP2Q8WYK2 163 aa4.93□□□□□ -1.62
CLHC1-201ENST00000401408 TINF2Q9BSI4 451 aa4.93□□□□□ -1.62
CLHC1-201ENST00000401408 GNL3Q9BVP2 549 aaKnown RBP eCLIP4.93□□□□□ -1.62
CLHC1-201ENST00000401408 DDX56Q9NY93 547 aaKnown RBP4.93□□□□□ -1.62
CLHC1-201ENST00000401408 TBC1D2BQ9UPU7 963 aa4.93□□□□□ -1.62
CLHC1-201ENST00000401408 HDAC5Q9UQL6 1122 aa4.93□□□□□ -1.62
CLHC1-201ENST00000401408 CCNB3Q8WWL7 1395 aa4.93□□□□□ -1.62
CLHC1-201ENST00000401408 ADGRB3O60242 1522 aa4.93□□□□□ -1.62
CLHC1-201ENST00000401408 SAFB2Q14151 953 aaKnown RBP eCLIP4.92□□□□□ -1.62
CLHC1-201ENST00000401408 IL17RAQ96F46 866 aa4.92□□□□□ -1.62
CLHC1-201ENST00000401408 C19orf44Q9H6X5 657 aa4.92□□□□□ -1.62
CLHC1-201ENST00000401408 BIN2Q9UBW5 565 aaPredicted RBP4.92□□□□□ -1.62
CLHC1-201ENST00000401408 MST1RQ04912 1400 aa4.92□□□□□ -1.62
CLHC1-201ENST00000401408 GLI3P10071 1580 aa4.92□□□□□ -1.62
CLHC1-201ENST00000401408 NOS1P29475 1434 aa4.92□□□□□ -1.62
CLHC1-201ENST00000401408 PTCH1Q13635 1447 aa4.92□□□□□ -1.62
CLHC1-201ENST00000401408 ADAMTS13Q76LX8 1427 aa4.92□□□□□ -1.62
CLHC1-201ENST00000401408 GIGYF1O75420 1035 aaPredicted RBP4.92□□□□□ -1.62
CLHC1-201ENST00000401408 APPP05067 770 aa4.92□□□□□ -1.62
CLHC1-201ENST00000401408 SCP2P22307 547 aa4.92□□□□□ -1.62
CLHC1-201ENST00000401408 HSD3B2P26439 372 aa4.92□□□□□ -1.62
CLHC1-201ENST00000401408 RAD51AP2Q09MP3 1159 aa4.92□□□□□ -1.62
CLHC1-201ENST00000401408 ENOX2Q16206 610 aaKnown RBP4.92□□□□□ -1.62
CLHC1-201ENST00000401408 PUS10Q3MIT2 529 aaKnown RBP4.92□□□□□ -1.62
CLHC1-201ENST00000401408 CCDC184Q52MB2 194 aa4.92□□□□□ -1.62
CLHC1-201ENST00000401408 PHLDB3Q6NSJ2 640 aa4.92□□□□□ -1.62
CLHC1-201ENST00000401408 DDX46Q7L014 1031 aaKnown RBP4.92□□□□□ -1.62
CLHC1-201ENST00000401408 FBXO33Q7Z6M2 555 aa4.92□□□□□ -1.62
CLHC1-201ENST00000401408 NT5DC4Q86YG4 428 aa4.92□□□□□ -1.62
CLHC1-201ENST00000401408 OTUD6BQ8N6M0 293 aa4.92□□□□□ -1.62
CLHC1-201ENST00000401408 ATL2Q8NHH9 583 aa4.92□□□□□ -1.62
CLHC1-201ENST00000401408 CTDP1Q9Y5B0 961 aaPredicted RBP4.92□□□□□ -1.62
CLHC1-201ENST00000401408 LMTK2Q8IWU2 1503 aa4.92□□□□□ -1.62
CLHC1-201ENST00000401408 PLEKHG1Q9ULL1 1385 aa4.92□□□□□ -1.62
CLHC1-201ENST00000401408 XRN1Q8IZH2 1706 aaKnown RBP4.91□□□□□ -1.62
CLHC1-201ENST00000401408 NUTM2FA1L443 756 aa4.91□□□□□ -1.62
CLHC1-201ENST00000401408 CD53P19397 219 aa4.91□□□□□ -1.62
CLHC1-201ENST00000401408 YY1P25490 414 aa4.91□□□□□ -1.62
CLHC1-201ENST00000401408 DHX8Q14562 1220 aaKnown RBP4.91□□□□□ -1.62
CLHC1-201ENST00000401408 DOK7Q18PE1 504 aa4.91□□□□□ -1.62
CLHC1-201ENST00000401408 ZNF746Q6NUN9 644 aaPredicted RBP4.91□□□□□ -1.62
CLHC1-201ENST00000401408 DEFB132Q7Z7B7 95 aa4.91□□□□□ -1.62
CLHC1-201ENST00000401408 LRRC59Q96AG4 307 aaKnown RBP4.91□□□□□ -1.62
CLHC1-201ENST00000401408 TRIM44Q96DX7 344 aaPredicted RBP4.91□□□□□ -1.62
CLHC1-201ENST00000401408 STAC3Q96MF2 364 aa4.91□□□□□ -1.62
CLHC1-201ENST00000401408 CEP63Q96MT8 703 aa4.91□□□□□ -1.62
CLHC1-201ENST00000401408 FEZ2Q9UHY8 353 aaPredicted RBP4.91□□□□□ -1.62
CLHC1-201ENST00000401408 MRPL42Q9Y6G3 142 aaKnown RBP4.91□□□□□ -1.62
CLHC1-201ENST00000401408 SCINQ9Y6U3 715 aa4.91□□□□□ -1.62
CLHC1-201ENST00000401408 PIK3R4Q99570 1358 aa4.91□□□□□ -1.62
CLHC1-201ENST00000401408 SCAMP3O14828 347 aaKnown RBP4.91□□□□□ -1.62
CLHC1-201ENST00000401408 FECHP22830 423 aa4.91□□□□□ -1.62
CLHC1-201ENST00000401408 CAMK2BQ13554 666 aa4.91□□□□□ -1.62
CLHC1-201ENST00000401408 IDI1Q13907 227 aa4.91□□□□□ -1.62
CLHC1-201ENST00000401408 MFSD10Q14728 455 aa4.91□□□□□ -1.62
CLHC1-201ENST00000401408 FAM212AQ96EL1 285 aa4.91□□□□□ -1.62
CLHC1-201ENST00000401408 L3MBTL3Q96JM7 780 aaPredicted RBP4.91□□□□□ -1.62
CLHC1-201ENST00000401408 ZNF512BQ96KM6 892 aaPredicted RBP4.91□□□□□ -1.62
CLHC1-201ENST00000401408 RSPH9Q9H1X1 276 aaPredicted RBP4.91□□□□□ -1.62
CLHC1-201ENST00000401408 PRM3Q9NNZ6 103 aa4.91□□□□□ -1.62
CLHC1-201ENST00000401408 TRPC5Q9UL62 973 aaPredicted RBP4.91□□□□□ -1.62
CLHC1-201ENST00000401408 PDZRN3Q9UPQ7 1066 aa4.91□□□□□ -1.62
CLHC1-201ENST00000401408 MTUS2Q5JR59 1369 aa4.9□□□□□ -1.62
CLHC1-201ENST00000401408 MYOM2P54296 1465 aa4.9□□□□□ -1.62
CLHC1-201ENST00000401408 CEP162Q5TB80 1403 aa4.9□□□□□ -1.62
CLHC1-201ENST00000401408 GNPATO15228 680 aa4.9□□□□□ -1.63
CLHC1-201ENST00000401408 UBE4AQ14139 1066 aa4.9□□□□□ -1.63
CLHC1-201ENST00000401408 MAP9Q49MG5 647 aa4.9□□□□□ -1.63
CLHC1-201ENST00000401408 PDCD7Q8N8D1 485 aaKnown RBP4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms