RNA–Protein interactions for RNA: ENST00000400761.7

PDGFA-202, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 5

Gene PDGFA, Length 689 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-202ENST00000400761 LGR6Q9HBX8 967 aa23.23■■□□□ 1.31
PDGFA-202ENST00000400761 CACNA1SQ13698 1873 aa23.23■■□□□ 1.31
PDGFA-202ENST00000400761 U2SURPO15042 1029 aaKnown RBP23.22■■□□□ 1.31
PDGFA-202ENST00000400761 PRR5LQ6MZQ0 368 aa23.22■■□□□ 1.31
PDGFA-202ENST00000400761 RASSF10A6NK89 507 aa23.21■■□□□ 1.31
PDGFA-202ENST00000400761 CANXP27824 592 aaKnown RBP23.21■■□□□ 1.31
PDGFA-202ENST00000400761 TBC1D9BQ66K14 1250 aa23.21■■□□□ 1.31
PDGFA-202ENST00000400761 VSIG10Q8N0Z9 540 aa23.21■■□□□ 1.31
PDGFA-202ENST00000400761 ARFGEF2Q9Y6D5 1785 aa23.2■■□□□ 1.3
PDGFA-202ENST00000400761 EIF5P55010 431 aaKnown RBP23.2■■□□□ 1.3
PDGFA-202ENST00000400761 CCDC24Q8N4L8 307 aa23.2■■□□□ 1.3
PDGFA-202ENST00000400761 MRS2Q9HD23 443 aa23.2■■□□□ 1.3
PDGFA-202ENST00000400761 NUDCQ9Y266 331 aa23.2■■□□□ 1.3
PDGFA-202ENST00000400761 ADAMTSL1Q8N6G6 1762 aa23.19■■□□□ 1.3
PDGFA-202ENST00000400761 A0A087WZG4 1122 aa23.19■■□□□ 1.3
PDGFA-202ENST00000400761 MAP2K1Q02750 393 aaPredicted RBP23.19■■□□□ 1.3
PDGFA-202ENST00000400761 MLLT1Q03111 559 aaPredicted RBP23.19■■□□□ 1.3
PDGFA-202ENST00000400761 DEFB115Q30KQ5 88 aa23.19■■□□□ 1.3
PDGFA-202ENST00000400761 CNKSR1Q969H4 720 aa23.19■■□□□ 1.3
PDGFA-202ENST00000400761 SCN7AQ01118 1682 aa23.19■■□□□ 1.3
PDGFA-202ENST00000400761 RNMTO43148 476 aaKnown RBP23.18■■□□□ 1.3
PDGFA-202ENST00000400761 RGS19P49795 217 aa23.18■■□□□ 1.3
PDGFA-202ENST00000400761 EAPPQ56P03 285 aaPredicted RBP23.18■■□□□ 1.3
PDGFA-202ENST00000400761 SOGA3Q5TF21 947 aa23.18■■□□□ 1.3
PDGFA-202ENST00000400761 PRPF40BQ6NWY9 871 aaKnown RBP23.18■■□□□ 1.3
PDGFA-202ENST00000400761 UBR2Q8IWV8 1755 aa23.18■■□□□ 1.3
PDGFA-202ENST00000400761 HMOX1P09601 288 aa23.17■■□□□ 1.3
PDGFA-202ENST00000400761 STYK1Q6J9G0 422 aa23.17■■□□□ 1.3
PDGFA-202ENST00000400761 WDR33Q9C0J8 1336 aaKnown RBP23.16■■□□□ 1.3
PDGFA-202ENST00000400761 U2AF1L5P0DN76 240 aaPredicted RBP23.16■■□□□ 1.3
PDGFA-202ENST00000400761 U2AF1Q01081 240 aaKnown RBP eCLIP23.16■■□□□ 1.3
PDGFA-202ENST00000400761 SRGNP10124 158 aa23.15■■□□□ 1.3
PDGFA-202ENST00000400761 HACL1Q9UJ83 578 aa23.15■■□□□ 1.3
PDGFA-202ENST00000400761 CLEC11AQ9Y240 323 aa23.15■■□□□ 1.3
PDGFA-202ENST00000400761 CCDC85CA6NKD9 419 aa23.14■■□□□ 1.29
PDGFA-202ENST00000400761 STARD3NLO95772 234 aa23.14■■□□□ 1.29
PDGFA-202ENST00000400761 ZNF541Q9H0D2 1346 aa23.13■■□□□ 1.29
PDGFA-202ENST00000400761 EPHX2P34913 555 aa23.13■■□□□ 1.29
PDGFA-202ENST00000400761 WDR43Q15061 677 aaKnown RBP eCLIP23.13■■□□□ 1.29
PDGFA-202ENST00000400761 CNTROBQ8N137 903 aa23.13■■□□□ 1.29
PDGFA-202ENST00000400761 MASTLQ96GX5 879 aa23.13■■□□□ 1.29
PDGFA-202ENST00000400761 CCER2I3L3R5 266 aa23.12■■□□□ 1.29
PDGFA-202ENST00000400761 CNBD1Q8NA66 436 aa23.12■■□□□ 1.29
PDGFA-202ENST00000400761 C7orf43Q8WVR3 580 aa23.12■■□□□ 1.29
PDGFA-202ENST00000400761 TBC1D2BQ9UPU7 963 aa23.12■■□□□ 1.29
PDGFA-202ENST00000400761 THSD7BQ9C0I4 1608 aa23.11■■□□□ 1.29
PDGFA-202ENST00000400761 MAP1SQ66K74 1059 aaPredicted RBP23.11■■□□□ 1.29
PDGFA-202ENST00000400761 PNMA8AQ86V59 439 aaPredicted RBP23.11■■□□□ 1.29
PDGFA-202ENST00000400761 ST5P78524 1137 aa23.1■■□□□ 1.29
PDGFA-202ENST00000400761 CCDC93Q567U6 631 aa23.1■■□□□ 1.29
PDGFA-202ENST00000400761 SETDB2Q96T68 719 aa23.1■■□□□ 1.29
PDGFA-202ENST00000400761 RSPH6AQ9H0K4 717 aa23.1■■□□□ 1.29
PDGFA-202ENST00000400761 ABT1Q9ULW3 272 aaKnown RBP23.1■■□□□ 1.29
PDGFA-202ENST00000400761 NPHP1O15259 732 aa23.08■■□□□ 1.29
PDGFA-202ENST00000400761 PRKAR2BP31323 418 aa23.08■■□□□ 1.29
PDGFA-202ENST00000400761 FKBP4Q02790 459 aaKnown RBP eCLIP23.08■■□□□ 1.29
PDGFA-202ENST00000400761 PNISRQ8TF01 805 aaKnown RBP23.08■■□□□ 1.29
PDGFA-202ENST00000400761 ZNF277Q9NRM2 450 aaPredicted RBP23.08■■□□□ 1.29
PDGFA-202ENST00000400761 ZNF330Q9Y3S2 320 aaPredicted RBP23.08■■□□□ 1.29
PDGFA-202ENST00000400761 RNF123Q5XPI4 1314 aa23.08■■□□□ 1.28
PDGFA-202ENST00000400761 IL6STP40189 918 aaPredicted RBP23.07■■□□□ 1.28
PDGFA-202ENST00000400761 TTC5Q8N0Z6 440 aa23.07■■□□□ 1.28
PDGFA-202ENST00000400761 ADAMTS8Q9UP79 889 aa23.07■■□□□ 1.28
PDGFA-202ENST00000400761 DDX21Q9NR30 783 aaKnown RBP eCLIP23.06■■□□□ 1.28
PDGFA-202ENST00000400761 BCORQ6W2J9 1755 aa23.05■■□□□ 1.28
PDGFA-202ENST00000400761 CAMTA2O94983 1202 aa23.05■■□□□ 1.28
PDGFA-202ENST00000400761 MTHFSDQ2M296 383 aaKnown RBP23.05■■□□□ 1.28
PDGFA-202ENST00000400761 ZNF496Q96IT1 587 aaPredicted RBP23.05■■□□□ 1.28
PDGFA-202ENST00000400761 BEGAINQ9BUH8 593 aa23.05■■□□□ 1.28
PDGFA-202ENST00000400761 TEX13AQ9BXU3 409 aaPredicted RBP23.05■■□□□ 1.28
PDGFA-202ENST00000400761 PDE4DIPQ5VU43 2346 aa23.04■■□□□ 1.28
PDGFA-202ENST00000400761 HEG1Q9ULI3 1381 aa23.04■■□□□ 1.28
PDGFA-202ENST00000400761 CAPNS2Q96L46 248 aa23.04■■□□□ 1.28
PDGFA-202ENST00000400761 FZD9O00144 591 aa23.03■■□□□ 1.28
PDGFA-202ENST00000400761 CCDC146Q8IYE0 955 aa23.03■■□□□ 1.28
PDGFA-202ENST00000400761 FAM9BQ8IZU0 186 aa23.03■■□□□ 1.28
PDGFA-202ENST00000400761 NPR1P16066 1061 aa23.02■■□□□ 1.28
PDGFA-202ENST00000400761 ECE1P42892 770 aa23.02■■□□□ 1.28
PDGFA-202ENST00000400761 GPC2Q8N158 579 aa23.02■■□□□ 1.28
PDGFA-202ENST00000400761 GPR101Q96P66 508 aaPredicted RBP23.02■■□□□ 1.28
PDGFA-202ENST00000400761 TNRC18O15417 2968 aaPredicted RBP23.01■■□□□ 1.27
PDGFA-202ENST00000400761 OLFM4Q6UX06 510 aa23.01■■□□□ 1.27
PDGFA-202ENST00000400761 PAXIP1Q6ZW49 1069 aaPredicted RBP23.01■■□□□ 1.27
PDGFA-202ENST00000400761 RTKN2Q8IZC4 609 aa23.01■■□□□ 1.27
PDGFA-202ENST00000400761 PHACTR3Q96KR7 559 aa23.01■■□□□ 1.27
PDGFA-202ENST00000400761 PLEKHF1Q96S99 279 aa23.01■■□□□ 1.27
PDGFA-202ENST00000400761 TRPM7Q96QT4 1865 aa23■■□□□ 1.27
PDGFA-202ENST00000400761 KLRG2A4D1S0 409 aaPredicted RBP23■■□□□ 1.27
PDGFA-202ENST00000400761 A1BGP04217 495 aa23■■□□□ 1.27
PDGFA-202ENST00000400761 IARSP41252 1262 aaKnown RBP23■■□□□ 1.27
PDGFA-202ENST00000400761 CYP4F22Q6NT55 531 aa23■■□□□ 1.27
PDGFA-202ENST00000400761 ZNF790Q6PG37 636 aa23■■□□□ 1.27
PDGFA-202ENST00000400761 NPM2Q86SE8 214 aaKnown RBP23■■□□□ 1.27
PDGFA-202ENST00000400761 FMR1Q06787 632 aaKnown RBP eCLIP22.99■■□□□ 1.27
PDGFA-202ENST00000400761 PNNQ9H307 717 aaKnown RBP22.99■■□□□ 1.27
PDGFA-202ENST00000400761 DLG5Q8TDM6 1919 aa22.99■■□□□ 1.27
PDGFA-202ENST00000400761 LTBP1Q14766 1721 aa22.99■■□□□ 1.27
PDGFA-202ENST00000400761 GRM1Q13255 1194 aa22.98■■□□□ 1.27
PDGFA-202ENST00000400761 NBPF5PQ86XG9 351 aaPredicted RBP22.98■■□□□ 1.27
PDGFA-202ENST00000400761 DZIP3Q86Y13 1208 aaKnown RBP22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms