RNA–Protein interactions for RNA: ENST00000400353.6

LINC00649-202, long intergenic non-protein coding RNA 649, humanhuman

TSL 3

Gene LINC00649, Length 2,090 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-202ENST00000400353 CNTROBQ8N137 903 aa13.1□□□□□ -0.31
LINC00649-202ENST00000400353 TNPO1Q92973 898 aaKnown RBP13.1□□□□□ -0.31
LINC00649-202ENST00000400353 GPATCH3Q96I76 525 aa13.1□□□□□ -0.31
LINC00649-202ENST00000400353 IL1RAPL2Q9NP60 686 aa13.1□□□□□ -0.31
LINC00649-202ENST00000400353 C5P01031 1676 aa13.1□□□□□ -0.31
LINC00649-202ENST00000400353 GRM8O00222 908 aa13.09□□□□□ -0.31
LINC00649-202ENST00000400353 PIP4K2BP78356 416 aa13.09□□□□□ -0.31
LINC00649-202ENST00000400353 SKOR2Q2VWA4 1001 aaPredicted RBP13.09□□□□□ -0.31
LINC00649-202ENST00000400353 CLEC17AQ6ZS10 378 aa13.09□□□□□ -0.31
LINC00649-202ENST00000400353 FMNL2Q96PY5 1086 aa13.09□□□□□ -0.31
LINC00649-202ENST00000400353 GLRX3O76003 335 aaKnown RBP13.09□□□□□ -0.31
LINC00649-202ENST00000400353 RIC3Q7Z5B4 369 aa13.09□□□□□ -0.31
LINC00649-202ENST00000400353 NUTM1Q86Y26 1132 aa13.09□□□□□ -0.31
LINC00649-202ENST00000400353 CLASRPQ8N2M8 674 aaKnown RBP13.09□□□□□ -0.31
LINC00649-202ENST00000400353 PI4K2BQ8TCG2 481 aa13.09□□□□□ -0.31
LINC00649-202ENST00000400353 TRAK2O60296 914 aa13.08□□□□□ -0.32
LINC00649-202ENST00000400353 TSHZ3Q63HK5 1081 aa13.08□□□□□ -0.32
LINC00649-202ENST00000400353 NFATC2IPQ8NCF5 419 aa13.08□□□□□ -0.32
LINC00649-202ENST00000400353 ERBB4Q15303 1308 aa13.08□□□□□ -0.32
LINC00649-202ENST00000400353 PRAMEF22A3QJZ6 481 aa13.08□□□□□ -0.32
LINC00649-202ENST00000400353 GOLGA6L22H0YM25 854 aa13.08□□□□□ -0.32
LINC00649-202ENST00000400353 CABP4P57796 275 aa13.08□□□□□ -0.32
LINC00649-202ENST00000400353 CHRNA2Q15822 529 aa13.08□□□□□ -0.32
LINC00649-202ENST00000400353 CABLES1Q8TDN4 633 aa13.08□□□□□ -0.32
LINC00649-202ENST00000400353 LAMB4A4D0S4 1761 aa13.07□□□□□ -0.32
LINC00649-202ENST00000400353 SOS2Q07890 1332 aaPredicted RBP13.07□□□□□ -0.32
LINC00649-202ENST00000400353 WDR17Q8IZU2 1322 aa13.07□□□□□ -0.32
LINC00649-202ENST00000400353 SLC39A6Q13433 755 aa13.07□□□□□ -0.32
LINC00649-202ENST00000400353 METTL22Q9BUU2 404 aaPredicted RBP13.07□□□□□ -0.32
LINC00649-202ENST00000400353 PCDH11XQ9BZA7 1347 aa13.07□□□□□ -0.32
LINC00649-202ENST00000400353 PCDH11YQ9BZA8 1340 aa13.07□□□□□ -0.32
LINC00649-202ENST00000400353 COL15A1P39059 1388 aa13.06□□□□□ -0.32
LINC00649-202ENST00000400353 CYP27B1O15528 508 aa13.06□□□□□ -0.32
LINC00649-202ENST00000400353 ANO2Q9NQ90 1003 aa13.06□□□□□ -0.32
LINC00649-202ENST00000400353 TAOK2Q9UL54 1235 aa13.06□□□□□ -0.32
LINC00649-202ENST00000400353 ISY1Q9ULR0 285 aaKnown RBP13.06□□□□□ -0.32
LINC00649-202ENST00000400353 UBAP1LF5GYI3 381 aa13.06□□□□□ -0.32
LINC00649-202ENST00000400353 AIMP1Q12904 312 aaKnown RBP13.06□□□□□ -0.32
LINC00649-202ENST00000400353 CWF19L2Q2TBE0 894 aaKnown RBP13.06□□□□□ -0.32
LINC00649-202ENST00000400353 XAGE3Q8WTP9 111 aa13.06□□□□□ -0.32
LINC00649-202ENST00000400353 RUFY2Q8WXA3 655 aa13.06□□□□□ -0.32
LINC00649-202ENST00000400353 SUCLG2Q96I99 432 aa13.06□□□□□ -0.32
LINC00649-202ENST00000400353 ZNF496Q96IT1 587 aaPredicted RBP13.06□□□□□ -0.32
LINC00649-202ENST00000400353 AK9Q5TCS8 1911 aa13.05□□□□□ -0.32
LINC00649-202ENST00000400353 NEURL1BA8MQ27 555 aa13.05□□□□□ -0.32
LINC00649-202ENST00000400353 IFIT2P09913 472 aaKnown RBP13.05□□□□□ -0.32
LINC00649-202ENST00000400353 G3BP1Q13283 466 aaKnown RBP eCLIP13.05□□□□□ -0.32
LINC00649-202ENST00000400353 PRDM11Q9NQV5 511 aa13.05□□□□□ -0.32
LINC00649-202ENST00000400353 ECHDC1Q9NTX5 307 aa13.05□□□□□ -0.32
LINC00649-202ENST00000400353 TOM1O60784 492 aa13.04□□□□□ -0.32
LINC00649-202ENST00000400353 PAXIP1Q6ZW49 1069 aaPredicted RBP13.04□□□□□ -0.32
LINC00649-202ENST00000400353 UNC5CLQ8IV45 518 aa13.04□□□□□ -0.32
LINC00649-202ENST00000400353 FOXD4L1Q9NU39 408 aa13.04□□□□□ -0.32
LINC00649-202ENST00000400353 FBXO3Q9UK99 471 aa13.04□□□□□ -0.32
LINC00649-202ENST00000400353 ERVV-2B6SEH9 535 aa13.04□□□□□ -0.32
LINC00649-202ENST00000400353 SGSM2O43147 1006 aa13.04□□□□□ -0.32
LINC00649-202ENST00000400353 IGKV5-2P06315 115 aa13.04□□□□□ -0.32
LINC00649-202ENST00000400353 GCKRQ14397 625 aa13.04□□□□□ -0.32
LINC00649-202ENST00000400353 ANKRD13DQ6ZTN6 518 aa13.04□□□□□ -0.32
LINC00649-202ENST00000400353 COPS6Q7L5N1 327 aa13.04□□□□□ -0.32
LINC00649-202ENST00000400353 ZCRB1Q8TBF4 217 aaKnown RBP13.04□□□□□ -0.32
LINC00649-202ENST00000400353 CERKQ8TCT0 537 aa13.04□□□□□ -0.32
LINC00649-202ENST00000400353 CNKSR2Q8WXI2 1034 aa13.04□□□□□ -0.32
LINC00649-202ENST00000400353 COL5A2P05997 1499 aaPredicted RBP13.03□□□□□ -0.32
LINC00649-202ENST00000400353 HIP1O00291 1037 aa13.03□□□□□ -0.32
LINC00649-202ENST00000400353 MYL6BP14649 208 aa13.03□□□□□ -0.32
LINC00649-202ENST00000400353 HSPA4P34932 840 aa13.03□□□□□ -0.32
LINC00649-202ENST00000400353 NEK4P51957 841 aa13.03□□□□□ -0.32
LINC00649-202ENST00000400353 BICC1Q9H694 974 aaKnown RBP13.03□□□□□ -0.32
LINC00649-202ENST00000400353 GOLGA6L3A6NEY3 463 aa13.03□□□□□ -0.32
LINC00649-202ENST00000400353 CYP2E1P05181 493 aaPredicted RBP13.03□□□□□ -0.32
LINC00649-202ENST00000400353 SSFA2P28290 1259 aa13.03□□□□□ -0.32
LINC00649-202ENST00000400353 NKX1-1Q15270 411 aaPredicted RBP13.03□□□□□ -0.32
LINC00649-202ENST00000400353 KIAA1211Q6ZU35 1233 aa13.03□□□□□ -0.32
LINC00649-202ENST00000400353 TOM1L2Q6ZVM7 507 aa13.03□□□□□ -0.32
LINC00649-202ENST00000400353 LRP10Q7Z4F1 713 aa13.03□□□□□ -0.32
LINC00649-202ENST00000400353 EVI5LQ96CN4 794 aa13.03□□□□□ -0.32
LINC00649-202ENST00000400353 MYD88Q99836 296 aa13.03□□□□□ -0.32
LINC00649-202ENST00000400353 CARD10Q9BWT7 1032 aa13.03□□□□□ -0.32
LINC00649-202ENST00000400353 RAD50Q92878 1312 aa13.03□□□□□ -0.32
LINC00649-202ENST00000400353 ABCA3Q99758 1704 aa13.03□□□□□ -0.32
LINC00649-202ENST00000400353 GLI3P10071 1580 aa13.02□□□□□ -0.32
LINC00649-202ENST00000400353 ROBO1Q9Y6N7 1651 aa13.02□□□□□ -0.32
LINC00649-202ENST00000400353 PLBD2Q8NHP8 589 aa13.02□□□□□ -0.33
LINC00649-202ENST00000400353 INTS4Q96HW7 963 aaKnown RBP13.02□□□□□ -0.33
LINC00649-202ENST00000400353 KAZALD1Q96I82 304 aa13.02□□□□□ -0.33
LINC00649-202ENST00000400353 CUL4AQ13619 759 aa13.01□□□□□ -0.33
LINC00649-202ENST00000400353 NAP1L5Q96NT1 182 aaPredicted RBP13.01□□□□□ -0.33
LINC00649-202ENST00000400353 DIAPH3Q9NSV4 1193 aa13.01□□□□□ -0.33
LINC00649-202ENST00000400353 USP16Q9Y5T5 823 aa13.01□□□□□ -0.33
LINC00649-202ENST00000400353 FSD2A1L4K1 749 aa13.01□□□□□ -0.33
LINC00649-202ENST00000400353 BAG4O95429 457 aaKnown RBP13.01□□□□□ -0.33
LINC00649-202ENST00000400353 AACSQ86V21 672 aa13.01□□□□□ -0.33
LINC00649-202ENST00000400353 PA2G4Q9UQ80 394 aaKnown RBP13.01□□□□□ -0.33
LINC00649-202ENST00000400353 PAPPAQ13219 1627 aa13.01□□□□□ -0.33
LINC00649-202ENST00000400353 UBR2Q8IWV8 1755 aa13□□□□□ -0.33
LINC00649-202ENST00000400353 ARFGEF2Q9Y6D5 1785 aa13□□□□□ -0.33
LINC00649-202ENST00000400353 IL2RBP14784 551 aa13□□□□□ -0.33
LINC00649-202ENST00000400353 TMX3Q96JJ7 454 aa13□□□□□ -0.33
LINC00649-202ENST00000400353 LSG1Q9H089 658 aaKnown RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms