RNA–Protein interactions for RNA: ENST00000399352.5

ITSN1-209, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 5,408 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-209ENST00000399352 CAPN2P17655 700 aa18.57■□□□□ 0.56
ITSN1-209ENST00000399352 ATRIPQ8WXE1 791 aa18.57■□□□□ 0.56
ITSN1-209ENST00000399352 NSD3Q9BZ95 1437 aa18.57■□□□□ 0.56
ITSN1-209ENST00000399352 SEC63Q9UGP8 760 aaKnown RBP18.57■□□□□ 0.56
ITSN1-209ENST00000399352 GOLGA8AA7E2F4 631 aa18.57■□□□□ 0.56
ITSN1-209ENST00000399352 SPTY2D1Q68D10 685 aaPredicted RBP18.57■□□□□ 0.56
ITSN1-209ENST00000399352 ZNF692Q9BU19 519 aaPredicted RBP18.57■□□□□ 0.56
ITSN1-209ENST00000399352 CNPY2Q9Y2B0 182 aa18.57■□□□□ 0.56
ITSN1-209ENST00000399352 CCDC94Q9BW85 323 aaPredicted RBP18.56■□□□□ 0.56
ITSN1-209ENST00000399352 UBASH3AP57075 661 aa18.56■□□□□ 0.56
ITSN1-209ENST00000399352 SSRP1Q08945 709 aaKnown RBP18.56■□□□□ 0.56
ITSN1-209ENST00000399352 TMX3Q96JJ7 454 aa18.56■□□□□ 0.56
ITSN1-209ENST00000399352 CTAGE15A4D2H0 777 aa18.56■□□□□ 0.56
ITSN1-209ENST00000399352 CTAGE8P0CG41 777 aa18.56■□□□□ 0.56
ITSN1-209ENST00000399352 CTAGE6Q86UF2 777 aa18.56■□□□□ 0.56
ITSN1-209ENST00000399352 RAB11FIP4Q86YS3 637 aa18.56■□□□□ 0.56
ITSN1-209ENST00000399352 CTAGE4Q8IX94 777 aa18.56■□□□□ 0.56
ITSN1-209ENST00000399352 CTCFLQ8NI51 663 aaPredicted RBP18.56■□□□□ 0.56
ITSN1-209ENST00000399352 CCDC97Q96F63 343 aaPredicted RBP18.56■□□□□ 0.56
ITSN1-209ENST00000399352 DRC1Q96MC2 740 aa18.56■□□□□ 0.56
ITSN1-209ENST00000399352 ZNF213O14771 459 aa18.55■□□□□ 0.56
ITSN1-209ENST00000399352 CCDC144CPQ8IYA2 1237 aa18.55■□□□□ 0.56
ITSN1-209ENST00000399352 N4BP3O15049 544 aa18.55■□□□□ 0.56
ITSN1-209ENST00000399352 CAVIN2O95810 425 aa18.55■□□□□ 0.56
ITSN1-209ENST00000399352 GTPBP4Q9BZE4 634 aaKnown RBP18.55■□□□□ 0.56
ITSN1-209ENST00000399352 FSD2A1L4K1 749 aa18.55■□□□□ 0.56
ITSN1-209ENST00000399352 TCERG1LQ5VWI1 586 aa18.55■□□□□ 0.56
ITSN1-209ENST00000399352 SLU7O95391 586 aaKnown RBP18.55■□□□□ 0.56
ITSN1-209ENST00000399352 ZSCAN22P10073 491 aaPredicted RBP18.55■□□□□ 0.56
ITSN1-209ENST00000399352 IDEP14735 1019 aa18.55■□□□□ 0.56
ITSN1-209ENST00000399352 CEP57Q86XR8 500 aa18.55■□□□□ 0.56
ITSN1-209ENST00000399352 RANBP6O60518 1105 aaKnown RBP18.54■□□□□ 0.56
ITSN1-209ENST00000399352 CCDC40Q4G0X9 1142 aa18.54■□□□□ 0.56
ITSN1-209ENST00000399352 USP48Q86UV5 1035 aa18.54■□□□□ 0.56
ITSN1-209ENST00000399352 CTNNA2P26232 953 aa18.54■□□□□ 0.56
ITSN1-209ENST00000399352 PRIM1P49642 420 aaKnown RBP18.54■□□□□ 0.56
ITSN1-209ENST00000399352 CCDC102BQ68D86 513 aa18.54■□□□□ 0.56
ITSN1-209ENST00000399352 USP16Q9Y5T5 823 aa18.54■□□□□ 0.56
ITSN1-209ENST00000399352 IFIT3O14879 490 aaKnown RBP18.54■□□□□ 0.56
ITSN1-209ENST00000399352 TAF7Q15545 349 aaPredicted RBP18.54■□□□□ 0.56
ITSN1-209ENST00000399352 CCDC194A0A1B0GVG4 234 aa18.54■□□□□ 0.56
ITSN1-209ENST00000399352 GNAT3A8MTJ3 354 aa18.54■□□□□ 0.56
ITSN1-209ENST00000399352 NLRP5P59047 1200 aa18.54■□□□□ 0.56
ITSN1-209ENST00000399352 FAM200AQ8TCP9 573 aa18.54■□□□□ 0.56
ITSN1-209ENST00000399352 CASKIN1Q8WXD9 1431 aa18.53■□□□□ 0.56
ITSN1-209ENST00000399352 IRX3P78415 501 aaPredicted RBP18.53■□□□□ 0.56
ITSN1-209ENST00000399352 NECAB1Q8N987 351 aa18.53■□□□□ 0.56
ITSN1-209ENST00000399352 HYPKQ9NX55 129 aa18.53■□□□□ 0.56
ITSN1-209ENST00000399352 MPHOSPH10O00566 681 aaKnown RBP18.53■□□□□ 0.56
ITSN1-209ENST00000399352 C6orf163Q5TEZ5 329 aa18.53■□□□□ 0.56
ITSN1-209ENST00000399352 AKR1B10O60218 316 aa18.53■□□□□ 0.56
ITSN1-209ENST00000399352 CCDC6Q16204 474 aa18.53■□□□□ 0.56
ITSN1-209ENST00000399352 C10orf67Q8IYJ2 551 aa18.53■□□□□ 0.56
ITSN1-209ENST00000399352 ORC3Q9UBD5 711 aaPredicted RBP18.53■□□□□ 0.56
ITSN1-209ENST00000399352 PHACTR2O75167 634 aa18.52■□□□□ 0.56
ITSN1-209ENST00000399352 DNAJC25Q9H1X3 360 aa18.52■□□□□ 0.56
ITSN1-209ENST00000399352 POLA1P09884 1462 aaPredicted RBP18.52■□□□□ 0.56
ITSN1-209ENST00000399352 MKNK2Q9HBH9 465 aa18.52■□□□□ 0.56
ITSN1-209ENST00000399352 TOM1L2Q6ZVM7 507 aa18.52■□□□□ 0.56
ITSN1-209ENST00000399352 HOMER2Q9NSB8 354 aa18.52■□□□□ 0.56
ITSN1-209ENST00000399352 IGHMBP2P38935 993 aaKnown RBP18.52■□□□□ 0.55
ITSN1-209ENST00000399352 RAB34Q9BZG1 259 aa18.52■□□□□ 0.55
ITSN1-209ENST00000399352 AKAP2Q9Y2D5 859 aa18.52■□□□□ 0.55
ITSN1-209ENST00000399352 CKAP4Q07065 602 aaKnown RBP18.51■□□□□ 0.55
ITSN1-209ENST00000399352 TMEM266Q2M3C6 531 aa18.51■□□□□ 0.55
ITSN1-209ENST00000399352 TTC22Q5TAA0 569 aa18.51■□□□□ 0.55
ITSN1-209ENST00000399352 EHBP1Q8NDI1 1231 aa18.51■□□□□ 0.55
ITSN1-209ENST00000399352 VPS18Q9P253 973 aa18.51■□□□□ 0.55
ITSN1-209ENST00000399352 MSL1Q68DK7 614 aa18.51■□□□□ 0.55
ITSN1-209ENST00000399352 CYB5RLQ6IPT4 315 aa18.51■□□□□ 0.55
ITSN1-209ENST00000399352 MYD88Q99836 296 aa18.51■□□□□ 0.55
ITSN1-209ENST00000399352 PRDM2Q13029 1718 aa18.51■□□□□ 0.55
ITSN1-209ENST00000399352 IARSP41252 1262 aaKnown RBP18.51■□□□□ 0.55
ITSN1-209ENST00000399352 TTC31Q49AM3 519 aaPredicted RBP18.51■□□□□ 0.55
ITSN1-209ENST00000399352 SPATA24Q86W54 205 aa18.51■□□□□ 0.55
ITSN1-209ENST00000399352 AOPEPQ8N6M6 819 aa18.51■□□□□ 0.55
ITSN1-209ENST00000399352 RTEL1-TNFRSF6BF6WH68 1400 aa18.5■□□□□ 0.55
ITSN1-209ENST00000399352 TRIM21P19474 475 aaKnown RBP18.5■□□□□ 0.55
ITSN1-209ENST00000399352 PLCD3Q8N3E9 789 aa18.5■□□□□ 0.55
ITSN1-209ENST00000399352 DACT1Q9NYF0 836 aa18.5■□□□□ 0.55
ITSN1-209ENST00000399352 PPM1EQ8WY54 764 aa18.5■□□□□ 0.55
ITSN1-209ENST00000399352 MICU3Q86XE3 530 aa18.5■□□□□ 0.55
ITSN1-209ENST00000399352 SYKP43405 635 aa18.49■□□□□ 0.55
ITSN1-209ENST00000399352 HAND2P61296 217 aa18.49■□□□□ 0.55
ITSN1-209ENST00000399352 IQCA1Q86XH1 822 aa18.49■□□□□ 0.55
ITSN1-209ENST00000399352 EVI5LQ96CN4 794 aa18.49■□□□□ 0.55
ITSN1-209ENST00000399352 ARAP1Q96P48 1450 aa18.49■□□□□ 0.55
ITSN1-209ENST00000399352 PAIP2Q9BPZ3 127 aaKnown RBP18.49■□□□□ 0.55
ITSN1-209ENST00000399352 KIAA0753Q2KHM9 967 aa18.49■□□□□ 0.55
ITSN1-209ENST00000399352 TRIM47Q96LD4 638 aa18.49■□□□□ 0.55
ITSN1-209ENST00000399352 KIF20AO95235 890 aa18.49■□□□□ 0.55
ITSN1-209ENST00000399352 SYT1P21579 422 aa18.49■□□□□ 0.55
ITSN1-209ENST00000399352 BICDL1Q6ZP65 573 aa18.49■□□□□ 0.55
ITSN1-209ENST00000399352 NEK1Q96PY6 1258 aa18.49■□□□□ 0.55
ITSN1-209ENST00000399352 A0A1W2PRG0 241 aa18.48■□□□□ 0.55
ITSN1-209ENST00000399352 PTGS1P23219 599 aa18.48■□□□□ 0.55
ITSN1-209ENST00000399352 ECHDC1Q9NTX5 307 aa18.48■□□□□ 0.55
ITSN1-209ENST00000399352 EBAG9O00559 213 aa18.48■□□□□ 0.55
ITSN1-209ENST00000399352 DNAJC21Q5F1R6 531 aaKnown RBP18.48■□□□□ 0.55
ITSN1-209ENST00000399352 CCDC155Q8N6L0 562 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms