RNA–Protein interactions for RNA: ENST00000399299.5

SMIM11A-203, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best) BASIC

Gene SMIM11A, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-203ENST00000399299 ARHGAP27Q6ZUM4 889 aa19.47■□□□□ 0.71
SMIM11A-203ENST00000399299 ERVV-1B6SEH8 477 aa19.46■□□□□ 0.71
SMIM11A-203ENST00000399299 C2CD5Q86YS7 1000 aa19.46■□□□□ 0.71
SMIM11A-203ENST00000399299 ST5P78524 1137 aa19.45■□□□□ 0.7
SMIM11A-203ENST00000399299 TTLL6Q8N841 843 aa19.45■□□□□ 0.7
SMIM11A-203ENST00000399299 MAP3K15Q6ZN16 1313 aa19.45■□□□□ 0.7
SMIM11A-203ENST00000399299 NPHP1O15259 732 aa19.44■□□□□ 0.7
SMIM11A-203ENST00000399299 NBPF5PQ86XG9 351 aaPredicted RBP19.44■□□□□ 0.7
SMIM11A-203ENST00000399299 NIP7Q9Y221 180 aaKnown RBP eCLIP19.44■□□□□ 0.7
SMIM11A-203ENST00000399299 ARFGEF2Q9Y6D5 1785 aa19.44■□□□□ 0.7
SMIM11A-203ENST00000399299 SBF1O95248 1867 aa19.43■□□□□ 0.7
SMIM11A-203ENST00000399299 APAF1O14727 1248 aa19.43■□□□□ 0.7
SMIM11A-203ENST00000399299 MYL6BP14649 208 aa19.43■□□□□ 0.7
SMIM11A-203ENST00000399299 HLFQ16534 295 aa19.43■□□□□ 0.7
SMIM11A-203ENST00000399299 KIF6Q6ZMV9 814 aa19.43■□□□□ 0.7
SMIM11A-203ENST00000399299 TTLL7Q6ZT98 887 aa19.42■□□□□ 0.7
SMIM11A-203ENST00000399299 LRP10Q7Z4F1 713 aa19.42■□□□□ 0.7
SMIM11A-203ENST00000399299 CFAP44Q96MT7 982 aa19.42■□□□□ 0.7
SMIM11A-203ENST00000399299 ANP32CO43423 234 aa19.41■□□□□ 0.7
SMIM11A-203ENST00000399299 HOXB7P09629 217 aa19.41■□□□□ 0.7
SMIM11A-203ENST00000399299 PDIA6Q15084 440 aa19.41■□□□□ 0.7
SMIM11A-203ENST00000399299 CCDC184Q52MB2 194 aa19.41■□□□□ 0.7
SMIM11A-203ENST00000399299 TPTE2Q6XPS3 522 aa19.41■□□□□ 0.7
SMIM11A-203ENST00000399299 CCDC24Q8N4L8 307 aa19.41■□□□□ 0.7
SMIM11A-203ENST00000399299 NGEFQ8N5V2 710 aa19.41■□□□□ 0.7
SMIM11A-203ENST00000399299 GPBP1L1Q9HC44 474 aaPredicted RBP19.41■□□□□ 0.7
SMIM11A-203ENST00000399299 EIF2S2P20042 333 aaKnown RBP19.4■□□□□ 0.7
SMIM11A-203ENST00000399299 CALD1Q05682 793 aaKnown RBP19.4■□□□□ 0.7
SMIM11A-203ENST00000399299 LAS1LQ9Y4W2 734 aaKnown RBP19.4■□□□□ 0.7
SMIM11A-203ENST00000399299 IBTKQ9P2D0 1353 aaPredicted RBP19.4■□□□□ 0.7
SMIM11A-203ENST00000399299 CACNA1SQ13698 1873 aa19.39■□□□□ 0.7
SMIM11A-203ENST00000399299 KLRG2A4D1S0 409 aaPredicted RBP19.39■□□□□ 0.69
SMIM11A-203ENST00000399299 ZNF853P0CG23 659 aa19.39■□□□□ 0.69
SMIM11A-203ENST00000399299 SRGNP10124 158 aa19.39■□□□□ 0.69
SMIM11A-203ENST00000399299 STYK1Q6J9G0 422 aa19.39■□□□□ 0.69
SMIM11A-203ENST00000399299 RIC1Q4ADV7 1423 aa19.38■□□□□ 0.69
SMIM11A-203ENST00000399299 ANKRD36CQ5JPF3 1778 aa19.38■□□□□ 0.69
SMIM11A-203ENST00000399299 C9orf131Q5VYM1 1079 aa19.38■□□□□ 0.69
SMIM11A-203ENST00000399299 GIGYF2Q6Y7W6 1299 aaKnown RBP19.38■□□□□ 0.69
SMIM11A-203ENST00000399299 ZNF622Q969S3 477 aaKnown RBP eCLIP19.38■□□□□ 0.69
SMIM11A-203ENST00000399299 NYXQ9GZU5 481 aa19.38■□□□□ 0.69
SMIM11A-203ENST00000399299 ZBTB3Q9H5J0 574 aa19.38■□□□□ 0.69
SMIM11A-203ENST00000399299 IFT57Q9NWB7 429 aa19.38■□□□□ 0.69
SMIM11A-203ENST00000399299 FER1L6Q2WGJ9 1857 aa19.37■□□□□ 0.69
SMIM11A-203ENST00000399299 C1QTNF8P60827 252 aa19.37■□□□□ 0.69
SMIM11A-203ENST00000399299 KRT24Q2M2I5 525 aa19.37■□□□□ 0.69
SMIM11A-203ENST00000399299 PROSER3Q2NL68 480 aa19.37■□□□□ 0.69
SMIM11A-203ENST00000399299 CNKSR1Q969H4 720 aa19.37■□□□□ 0.69
SMIM11A-203ENST00000399299 MASTLQ96GX5 879 aa19.37■□□□□ 0.69
SMIM11A-203ENST00000399299 DDX21Q9NR30 783 aaKnown RBP eCLIP19.37■□□□□ 0.69
SMIM11A-203ENST00000399299 SLX4Q8IY92 1834 aa19.37■□□□□ 0.69
SMIM11A-203ENST00000399299 GNAI1P63096 354 aa19.36■□□□□ 0.69
SMIM11A-203ENST00000399299 ZNF34Q8IZ26 560 aa19.36■□□□□ 0.69
SMIM11A-203ENST00000399299 MBIPQ9NS73 344 aa19.36■□□□□ 0.69
SMIM11A-203ENST00000399299 TNRC6CQ9HCJ0 1690 aaKnown RBP19.36■□□□□ 0.69
SMIM11A-203ENST00000399299 CCDC88AQ3V6T2 1871 aa19.35■□□□□ 0.69
SMIM11A-203ENST00000399299 UBN2Q6ZU65 1347 aa19.35■□□□□ 0.69
SMIM11A-203ENST00000399299 ZC3H4Q9UPT8 1303 aaKnown RBP19.35■□□□□ 0.69
SMIM11A-203ENST00000399299 NPR1P16066 1061 aa19.35■□□□□ 0.69
SMIM11A-203ENST00000399299 ZNF526Q8TF50 670 aaPredicted RBP19.35■□□□□ 0.69
SMIM11A-203ENST00000399299 MRS2Q9HD23 443 aa19.35■□□□□ 0.69
SMIM11A-203ENST00000399299 RNF181Q9P0P0 153 aa19.35■□□□□ 0.69
SMIM11A-203ENST00000399299 FAM177BA6PVY3 158 aa19.34■□□□□ 0.69
SMIM11A-203ENST00000399299 ANXA1P04083 346 aa19.34■□□□□ 0.69
SMIM11A-203ENST00000399299 GTF2E1P29083 439 aaPredicted RBP19.34■□□□□ 0.69
SMIM11A-203ENST00000399299 RASSF7Q02833 373 aa19.34■□□□□ 0.69
SMIM11A-203ENST00000399299 HDGFL1Q5TGJ6 251 aa19.34■□□□□ 0.69
SMIM11A-203ENST00000399299 NECTIN2Q92692 538 aa19.34■□□□□ 0.69
SMIM11A-203ENST00000399299 NFKBIEO00221 500 aa19.33■□□□□ 0.68
SMIM11A-203ENST00000399299 LMNB1P20700 586 aa19.33■□□□□ 0.68
SMIM11A-203ENST00000399299 GPTP24298 496 aa19.33■□□□□ 0.68
SMIM11A-203ENST00000399299 CCDC27Q2M243 656 aa19.33■□□□□ 0.68
SMIM11A-203ENST00000399299 NCBP3Q53F19 620 aaKnown RBP19.33■□□□□ 0.68
SMIM11A-203ENST00000399299 PARP10Q53GL7 1025 aa19.33■□□□□ 0.68
SMIM11A-203ENST00000399299 PRPF40BQ6NWY9 871 aaKnown RBP19.33■□□□□ 0.68
SMIM11A-203ENST00000399299 COPS6Q7L5N1 327 aa19.33■□□□□ 0.68
SMIM11A-203ENST00000399299 CHPF2Q9P2E5 772 aa19.33■□□□□ 0.68
SMIM11A-203ENST00000399299 TIAM2Q8IVF5 1701 aa19.33■□□□□ 0.68
SMIM11A-203ENST00000399299 DICER1Q9UPY3 1922 aaKnown RBP19.33■□□□□ 0.68
SMIM11A-203ENST00000399299 ABCC12Q96J65 1359 aa19.32■□□□□ 0.68
SMIM11A-203ENST00000399299 LTBP3Q9NS15 1303 aa19.32■□□□□ 0.68
SMIM11A-203ENST00000399299 C21orf2O43822 256 aa19.32■□□□□ 0.68
SMIM11A-203ENST00000399299 SOGA3Q5TF21 947 aa19.32■□□□□ 0.68
SMIM11A-203ENST00000399299 DUSP27Q5VZP5 1158 aa19.32■□□□□ 0.68
SMIM11A-203ENST00000399299 XAGE3Q8WTP9 111 aa19.32■□□□□ 0.68
SMIM11A-203ENST00000399299 DBF4Q9UBU7 674 aaPredicted RBP19.32■□□□□ 0.68
SMIM11A-203ENST00000399299 NTSR2O95665 410 aa19.31■□□□□ 0.68
SMIM11A-203ENST00000399299 CRY2Q49AN0 593 aa19.31■□□□□ 0.68
SMIM11A-203ENST00000399299 HSP90AB3PQ58FF7 597 aa19.31■□□□□ 0.68
SMIM11A-203ENST00000399299 SUSD4Q5VX71 490 aa19.31■□□□□ 0.68
SMIM11A-203ENST00000399299 PPP1R42Q7Z4L9 355 aa19.31■□□□□ 0.68
SMIM11A-203ENST00000399299 RNF123Q5XPI4 1314 aa19.3■□□□□ 0.68
SMIM11A-203ENST00000399299 PRELPP51888 382 aa19.3■□□□□ 0.68
SMIM11A-203ENST00000399299 ERFEQ4G0M1 354 aa19.3■□□□□ 0.68
SMIM11A-203ENST00000399299 NUTM1Q86Y26 1132 aa19.3■□□□□ 0.68
SMIM11A-203ENST00000399299 KIF3CO14782 793 aa19.29■□□□□ 0.68
SMIM11A-203ENST00000399299 ALDH1B1P30837 517 aa19.29■□□□□ 0.68
SMIM11A-203ENST00000399299 AIMP1Q12904 312 aaKnown RBP19.29■□□□□ 0.68
SMIM11A-203ENST00000399299 C7orf43Q8WVR3 580 aa19.29■□□□□ 0.68
SMIM11A-203ENST00000399299 HYPKQ9NX55 129 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms