RNA–Protein interactions for RNA: ENST00000399295.2

SMIM11A-202, Transcript of small integral membrane protein 11A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMIM11A, Length 1,074 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-202ENST00000399295 LRP10Q7Z4F1 713 aa22.59■■□□□ 1.21
SMIM11A-202ENST00000399295 SETDB2Q96T68 719 aa22.59■■□□□ 1.21
SMIM11A-202ENST00000399295 DDX21Q9NR30 783 aaKnown RBP eCLIP22.59■■□□□ 1.21
SMIM11A-202ENST00000399295 C10orf71Q711Q0 1435 aa22.58■■□□□ 1.21
SMIM11A-202ENST00000399295 ERVV-1B6SEH8 477 aa22.58■■□□□ 1.21
SMIM11A-202ENST00000399295 TGFB2P61812 414 aa22.58■■□□□ 1.21
SMIM11A-202ENST00000399295 CHPF2Q9P2E5 772 aa22.58■■□□□ 1.21
SMIM11A-202ENST00000399295 SCN7AQ01118 1682 aa22.58■■□□□ 1.2
SMIM11A-202ENST00000399295 MAP3K15Q6ZN16 1313 aa22.57■■□□□ 1.2
SMIM11A-202ENST00000399295 HLFQ16534 295 aa22.57■■□□□ 1.2
SMIM11A-202ENST00000399295 DBF4Q9UBU7 674 aaPredicted RBP22.57■■□□□ 1.2
SMIM11A-202ENST00000399295 CARMIL3Q8ND23 1372 aa22.56■■□□□ 1.2
SMIM11A-202ENST00000399295 GRIN3BO60391 1043 aa22.56■■□□□ 1.2
SMIM11A-202ENST00000399295 ZBTB3Q9H5J0 574 aa22.56■■□□□ 1.2
SMIM11A-202ENST00000399295 GPR162Q16538 588 aa22.55■■□□□ 1.2
SMIM11A-202ENST00000399295 COPS6Q7L5N1 327 aa22.55■■□□□ 1.2
SMIM11A-202ENST00000399295 PELP1Q8IZL8 1130 aaKnown RBP22.55■■□□□ 1.2
SMIM11A-202ENST00000399295 TSPYL6Q8N831 410 aa22.55■■□□□ 1.2
SMIM11A-202ENST00000399295 CHMP4AQ9BY43 222 aa22.55■■□□□ 1.2
SMIM11A-202ENST00000399295 NIP7Q9Y221 180 aaKnown RBP eCLIP22.55■■□□□ 1.2
SMIM11A-202ENST00000399295 FANCIQ9NVI1 1328 aa22.55■■□□□ 1.2
SMIM11A-202ENST00000399295 KIF13BQ9NQT8 1826 aa22.54■■□□□ 1.2
SMIM11A-202ENST00000399295 GOLGA2Q08379 1002 aa22.54■■□□□ 1.2
SMIM11A-202ENST00000399295 AIMP1Q12904 312 aaKnown RBP22.54■■□□□ 1.2
SMIM11A-202ENST00000399295 XAGE3Q8WTP9 111 aa22.54■■□□□ 1.2
SMIM11A-202ENST00000399295 BCORQ6W2J9 1755 aa22.53■■□□□ 1.2
SMIM11A-202ENST00000399295 A0A0G2JLW4 131 aa22.53■■□□□ 1.2
SMIM11A-202ENST00000399295 MYH16Q9H6N6 1097 aa22.53■■□□□ 1.2
SMIM11A-202ENST00000399295 SPINK5Q9NQ38 1064 aaPredicted RBP22.53■■□□□ 1.2
SMIM11A-202ENST00000399295 HYPKQ9NX55 129 aa22.53■■□□□ 1.2
SMIM11A-202ENST00000399295 ZNF521Q96K83 1311 aa22.53■■□□□ 1.2
SMIM11A-202ENST00000399295 NPHP1O15259 732 aa22.52■■□□□ 1.2
SMIM11A-202ENST00000399295 DPEP1P16444 411 aa22.52■■□□□ 1.2
SMIM11A-202ENST00000399295 TWISTNBQ3B726 338 aaPredicted RBP22.52■■□□□ 1.2
SMIM11A-202ENST00000399295 CCDC30Q5VVM6 783 aa22.52■■□□□ 1.2
SMIM11A-202ENST00000399295 CHD4Q14839 1912 aa22.51■■□□□ 1.19
SMIM11A-202ENST00000399295 PRR5LQ6MZQ0 368 aa22.51■■□□□ 1.19
SMIM11A-202ENST00000399295 NBPF5PQ86XG9 351 aaPredicted RBP22.51■■□□□ 1.19
SMIM11A-202ENST00000399295 CNBD1Q8NA66 436 aa22.51■■□□□ 1.19
SMIM11A-202ENST00000399295 PXDNLA1KZ92 1463 aa22.51■■□□□ 1.19
SMIM11A-202ENST00000399295 GIGYF2Q6Y7W6 1299 aaKnown RBP22.5■■□□□ 1.19
SMIM11A-202ENST00000399295 WWC3Q9ULE0 1092 aa22.5■■□□□ 1.19
SMIM11A-202ENST00000399295 EXOSC9Q06265 439 aaKnown RBP22.49■■□□□ 1.19
SMIM11A-202ENST00000399295 CCDC24Q8N4L8 307 aa22.49■■□□□ 1.19
SMIM11A-202ENST00000399295 PDZRN3Q9UPQ7 1066 aa22.49■■□□□ 1.19
SMIM11A-202ENST00000399295 FAM177BA6PVY3 158 aa22.48■■□□□ 1.19
SMIM11A-202ENST00000399295 YBX3P16989 372 aaKnown RBP eCLIP22.48■■□□□ 1.19
SMIM11A-202ENST00000399295 GPTP24298 496 aa22.48■■□□□ 1.19
SMIM11A-202ENST00000399295 TPTE2Q6XPS3 522 aa22.48■■□□□ 1.19
SMIM11A-202ENST00000399295 GOLGB1Q14789 3259 aaKnown RBP22.48■■□□□ 1.19
SMIM11A-202ENST00000399295 NRXN2Q9P2S2 1712 aa22.48■■□□□ 1.19
SMIM11A-202ENST00000399295 ATP10DQ9P241 1426 aa22.48■■□□□ 1.19
SMIM11A-202ENST00000399295 AFDNP55196 1824 aaKnown RBP22.47■■□□□ 1.19
SMIM11A-202ENST00000399295 KCNA3P22001 575 aa22.47■■□□□ 1.19
SMIM11A-202ENST00000399295 CHRNA5P30532 468 aa22.47■■□□□ 1.19
SMIM11A-202ENST00000399295 ST5P78524 1137 aa22.47■■□□□ 1.19
SMIM11A-202ENST00000399295 ANKRD13DQ6ZTN6 518 aa22.47■■□□□ 1.19
SMIM11A-202ENST00000399295 ZNF34Q8IZ26 560 aa22.47■■□□□ 1.19
SMIM11A-202ENST00000399295 BRIP1Q9BX63 1249 aa22.47■■□□□ 1.19
SMIM11A-202ENST00000399295 HSP90AB3PQ58FF7 597 aa22.46■■□□□ 1.19
SMIM11A-202ENST00000399295 PLBD2Q8NHP8 589 aa22.46■■□□□ 1.19
SMIM11A-202ENST00000399295 STK31Q9BXU1 1019 aa22.46■■□□□ 1.19
SMIM11A-202ENST00000399295 UTRNP46939 3433 aa22.45■■□□□ 1.19
SMIM11A-202ENST00000399295 GTF2E1P29083 439 aaPredicted RBP22.45■■□□□ 1.18
SMIM11A-202ENST00000399295 PDE6BP35913 854 aa22.45■■□□□ 1.18
SMIM11A-202ENST00000399295 PHAXQ9H814 394 aaKnown RBP22.45■■□□□ 1.18
SMIM11A-202ENST00000399295 PIM2Q9P1W9 311 aa22.45■■□□□ 1.18
SMIM11A-202ENST00000399295 E9PSI1 815 aa22.44■■□□□ 1.18
SMIM11A-202ENST00000399295 H0YIN7 160 aa22.44■■□□□ 1.18
SMIM11A-202ENST00000399295 TCERG1O14776 1098 aaKnown RBP22.44■■□□□ 1.18
SMIM11A-202ENST00000399295 VAMP4O75379 141 aa22.44■■□□□ 1.18
SMIM11A-202ENST00000399295 YY1P25490 414 aa22.44■■□□□ 1.18
SMIM11A-202ENST00000399295 UBN2Q6ZU65 1347 aa22.44■■□□□ 1.18
SMIM11A-202ENST00000399295 C2CD5Q86YS7 1000 aa22.44■■□□□ 1.18
SMIM11A-202ENST00000399295 NYXQ9GZU5 481 aa22.44■■□□□ 1.18
SMIM11A-202ENST00000399295 BCS1LQ9Y276 419 aa22.44■■□□□ 1.18
SMIM11A-202ENST00000399295 KIAA1551Q9HCM1 1747 aa22.43■■□□□ 1.18
SMIM11A-202ENST00000399295 TCIRG1Q13488 830 aa22.43■■□□□ 1.18
SMIM11A-202ENST00000399295 PARP10Q53GL7 1025 aa22.43■■□□□ 1.18
SMIM11A-202ENST00000399295 N4BP2Q86UW6 1770 aaPredicted RBP22.43■■□□□ 1.18
SMIM11A-202ENST00000399295 SUSD4Q5VX71 490 aa22.42■■□□□ 1.18
SMIM11A-202ENST00000399295 RIC3Q7Z5B4 369 aa22.42■■□□□ 1.18
SMIM11A-202ENST00000399295 NUP98P52948 1817 aa22.42■■□□□ 1.18
SMIM11A-202ENST00000399295 SLC4A2P04920 1241 aa22.41■■□□□ 1.18
SMIM11A-202ENST00000399295 SLFN5Q08AF3 891 aa22.41■■□□□ 1.18
SMIM11A-202ENST00000399295 DALRD3Q5D0E6 543 aaKnown RBP22.41■■□□□ 1.18
SMIM11A-202ENST00000399295 PPP1R42Q7Z4L9 355 aa22.41■■□□□ 1.18
SMIM11A-202ENST00000399295 DDX58O95786 925 aaKnown RBP22.4■■□□□ 1.18
SMIM11A-202ENST00000399295 NUTM1Q86Y26 1132 aa22.4■■□□□ 1.18
SMIM11A-202ENST00000399295 CDCA7LQ96GN5 454 aa22.4■■□□□ 1.18
SMIM11A-202ENST00000399295 IBTKQ9P2D0 1353 aaPredicted RBP22.39■■□□□ 1.18
SMIM11A-202ENST00000399295 ERFEQ4G0M1 354 aa22.39■■□□□ 1.17
SMIM11A-202ENST00000399295 NLRP10Q86W26 655 aa22.39■■□□□ 1.17
SMIM11A-202ENST00000399295 UTP14AQ9BVJ6 771 aaKnown RBP22.39■■□□□ 1.17
SMIM11A-202ENST00000399295 NTSR2O95665 410 aa22.38■■□□□ 1.17
SMIM11A-202ENST00000399295 ZNF622Q969S3 477 aaKnown RBP eCLIP22.38■■□□□ 1.17
SMIM11A-202ENST00000399295 G2E3Q7L622 706 aa22.37■■□□□ 1.17
SMIM11A-202ENST00000399295 TTLL6Q8N841 843 aa22.37■■□□□ 1.17
SMIM11A-202ENST00000399295 ISCA1Q9BUE6 129 aa22.37■■□□□ 1.17
SMIM11A-202ENST00000399295 BRCA1P38398 1863 aaKnown RBP22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms