RNA–Protein interactions for RNA: ENST00000399273.5

CCDC144A-206, Transcript of coiled-coil domain containing 144A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC144A, Length 8,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-206ENST00000399273 CLEC11AQ9Y240 323 aa13.4□□□□□ -0.26
CCDC144A-206ENST00000399273 KIF4AO95239 1232 aa13.4□□□□□ -0.26
CCDC144A-206ENST00000399273 KAT14Q9H8E8 782 aa13.4□□□□□ -0.26
CCDC144A-206ENST00000399273 ACTN2P35609 894 aa13.4□□□□□ -0.26
CCDC144A-206ENST00000399273 IFIT3O14879 490 aaKnown RBP13.39□□□□□ -0.27
CCDC144A-206ENST00000399273 LRRC27Q9C0I9 530 aa13.39□□□□□ -0.27
CCDC144A-206ENST00000399273 CCDC172P0C7W6 258 aa13.39□□□□□ -0.27
CCDC144A-206ENST00000399273 TROQ12816 1431 aaPredicted RBP13.39□□□□□ -0.27
CCDC144A-206ENST00000399273 ZNF354CQ86Y25 554 aa13.39□□□□□ -0.27
CCDC144A-206ENST00000399273 TIAM1Q13009 1591 aa13.39□□□□□ -0.27
CCDC144A-206ENST00000399273 KIF2AO00139 706 aaPredicted RBP13.39□□□□□ -0.27
CCDC144A-206ENST00000399273 DDX12PQ92771 950 aa13.39□□□□□ -0.27
CCDC144A-206ENST00000399273 PRKCSHP14314 528 aaPredicted RBP13.39□□□□□ -0.27
CCDC144A-206ENST00000399273 ALS2CR12Q96Q35 445 aa13.39□□□□□ -0.27
CCDC144A-206ENST00000399273 RPAP2Q8IXW5 612 aaPredicted RBP13.39□□□□□ -0.27
CCDC144A-206ENST00000399273 RGS22Q8NE09 1264 aa13.39□□□□□ -0.27
CCDC144A-206ENST00000399273 BOLA2Q9H3K6 86 aa13.38□□□□□ -0.27
CCDC144A-206ENST00000399273 TTC12Q9H892 705 aaPredicted RBP13.38□□□□□ -0.27
CCDC144A-206ENST00000399273 MSH6P52701 1360 aa13.38□□□□□ -0.27
CCDC144A-206ENST00000399273 TDRD12Q587J7 1177 aaKnown RBP13.38□□□□□ -0.27
CCDC144A-206ENST00000399273 CCDC83Q8IWF9 413 aa13.38□□□□□ -0.27
CCDC144A-206ENST00000399273 NAA15Q9BXJ9 866 aaKnown RBP13.38□□□□□ -0.27
CCDC144A-206ENST00000399273 IKBKGQ9Y6K9 419 aa13.38□□□□□ -0.27
CCDC144A-206ENST00000399273 GOLGA8BA8MQT2 603 aa13.38□□□□□ -0.27
CCDC144A-206ENST00000399273 TBC1D5Q92609 795 aa13.38□□□□□ -0.27
CCDC144A-206ENST00000399273 ANO10Q9NW15 660 aa13.38□□□□□ -0.27
CCDC144A-206ENST00000399273 SFPQP23246 707 aaKnown RBP eCLIP13.38□□□□□ -0.27
CCDC144A-206ENST00000399273 SH2B1Q9NRF2 756 aaPredicted RBP13.38□□□□□ -0.27
CCDC144A-206ENST00000399273 FSD2A1L4K1 749 aa13.38□□□□□ -0.27
CCDC144A-206ENST00000399273 UBE4AQ14139 1066 aa13.38□□□□□ -0.27
CCDC144A-206ENST00000399273 CAMSAP2Q08AD1 1489 aa13.38□□□□□ -0.27
CCDC144A-206ENST00000399273 TSPY2A6NKD2 308 aa13.37□□□□□ -0.27
CCDC144A-206ENST00000399273 ERMNQ8TAM6 284 aa13.37□□□□□ -0.27
CCDC144A-206ENST00000399273 PAFAH1B1P43034 410 aa13.37□□□□□ -0.27
CCDC144A-206ENST00000399273 CWC25Q9NXE8 425 aaPredicted RBP13.37□□□□□ -0.27
CCDC144A-206ENST00000399273 SMC1AQ14683 1233 aaKnown RBP13.37□□□□□ -0.27
CCDC144A-206ENST00000399273 TMCO3Q6UWJ1 677 aa13.37□□□□□ -0.27
CCDC144A-206ENST00000399273 NUTM1Q86Y26 1132 aa13.37□□□□□ -0.27
CCDC144A-206ENST00000399273 SHTN1A0MZ66 631 aa13.37□□□□□ -0.27
CCDC144A-206ENST00000399273 NBPF6Q5VWK0 638 aa13.37□□□□□ -0.27
CCDC144A-206ENST00000399273 NBPF5PQ86XG9 351 aaPredicted RBP13.37□□□□□ -0.27
CCDC144A-206ENST00000399273 NBPF4Q96M43 638 aa13.37□□□□□ -0.27
CCDC144A-206ENST00000399273 PLVAPQ9BX97 442 aa13.37□□□□□ -0.27
CCDC144A-206ENST00000399273 CTAGE5O15320 804 aa13.37□□□□□ -0.27
CCDC144A-206ENST00000399273 CCDC152Q4G0S7 254 aa13.37□□□□□ -0.27
CCDC144A-206ENST00000399273 TCERG1LQ5VWI1 586 aa13.37□□□□□ -0.27
CCDC144A-206ENST00000399273 CRNKL1Q9BZJ0 848 aaKnown RBP13.37□□□□□ -0.27
CCDC144A-206ENST00000399273 NAIPQ13075 1403 aa13.37□□□□□ -0.27
CCDC144A-206ENST00000399273 MX1P20591 662 aa13.37□□□□□ -0.27
CCDC144A-206ENST00000399273 ZNF710Q8N1W2 664 aa13.37□□□□□ -0.27
CCDC144A-206ENST00000399273 CD109Q6YHK3 1445 aa13.36□□□□□ -0.27
CCDC144A-206ENST00000399273 STX6O43752 255 aa13.36□□□□□ -0.27
CCDC144A-206ENST00000399273 FILIP1Q7Z7B0 1213 aa13.36□□□□□ -0.27
CCDC144A-206ENST00000399273 CNNM3Q8NE01 707 aa13.36□□□□□ -0.27
CCDC144A-206ENST00000399273 TBCAO75347 108 aaKnown RBP13.36□□□□□ -0.27
CCDC144A-206ENST00000399273 TOP1P11387 765 aaKnown RBP13.36□□□□□ -0.27
CCDC144A-206ENST00000399273 IFI16Q16666 785 aaKnown RBP13.36□□□□□ -0.27
CCDC144A-206ENST00000399273 YEATS4O95619 227 aa13.36□□□□□ -0.27
CCDC144A-206ENST00000399273 MTIF2P46199 727 aaKnown RBP13.36□□□□□ -0.27
CCDC144A-206ENST00000399273 SCAND2PQ9GZW5 306 aaPredicted RBP13.36□□□□□ -0.27
CCDC144A-206ENST00000399273 PRC1O43663 620 aa13.36□□□□□ -0.27
CCDC144A-206ENST00000399273 MFSD6Q6ZSS7 791 aa13.36□□□□□ -0.27
CCDC144A-206ENST00000399273 TMPOP42166 694 aaKnown RBP13.35□□□□□ -0.27
CCDC144A-206ENST00000399273 ADGRL1O94910 1474 aa13.35□□□□□ -0.27
CCDC144A-206ENST00000399273 GOLGA8AA7E2F4 631 aa13.35□□□□□ -0.27
CCDC144A-206ENST00000399273 POLD1P28340 1107 aa13.35□□□□□ -0.27
CCDC144A-206ENST00000399273 BBXQ8WY36 941 aaPredicted RBP13.35□□□□□ -0.27
CCDC144A-206ENST00000399273 EXOC6BQ9Y2D4 811 aa13.35□□□□□ -0.27
CCDC144A-206ENST00000399273 CCDC40Q4G0X9 1142 aa13.35□□□□□ -0.27
CCDC144A-206ENST00000399273 MIS18AQ9NYP9 233 aa13.35□□□□□ -0.27
CCDC144A-206ENST00000399273 TNNT1P13805 278 aa13.35□□□□□ -0.27
CCDC144A-206ENST00000399273 PLS1Q14651 629 aa13.35□□□□□ -0.27
CCDC144A-206ENST00000399273 UBXN4Q92575 508 aa13.35□□□□□ -0.27
CCDC144A-206ENST00000399273 CTTNBP2Q8WZ74 1663 aa13.35□□□□□ -0.27
CCDC144A-206ENST00000399273 SETDB2Q96T68 719 aa13.35□□□□□ -0.27
CCDC144A-206ENST00000399273 BCCIPQ9P287 314 aaKnown RBP eCLIP13.35□□□□□ -0.27
CCDC144A-206ENST00000399273 DBF4Q9UBU7 674 aaPredicted RBP13.35□□□□□ -0.27
CCDC144A-206ENST00000399273 KANK3Q6NY19 840 aa13.35□□□□□ -0.27
CCDC144A-206ENST00000399273 CDCA7LQ96GN5 454 aa13.35□□□□□ -0.27
CCDC144A-206ENST00000399273 GPTP24298 496 aa13.34□□□□□ -0.27
CCDC144A-206ENST00000399273 TMEM67Q5HYA8 995 aa13.34□□□□□ -0.27
CCDC144A-206ENST00000399273 MCM10Q7L590 875 aa13.34□□□□□ -0.27
CCDC144A-206ENST00000399273 DHX37Q8IY37 1157 aaKnown RBP13.34□□□□□ -0.27
CCDC144A-206ENST00000399273 RAB3IL1Q8TBN0 382 aa13.34□□□□□ -0.27
CCDC144A-206ENST00000399273 LMOD1P29536 600 aaPredicted RBP13.34□□□□□ -0.27
CCDC144A-206ENST00000399273 CCDC82Q8N4S0 544 aa13.34□□□□□ -0.27
CCDC144A-206ENST00000399273 TTC16Q8NEE8 873 aa13.34□□□□□ -0.27
CCDC144A-206ENST00000399273 TTC21BQ7Z4L5 1316 aa13.34□□□□□ -0.27
CCDC144A-206ENST00000399273 TSPY3P0CV98 308 aa13.34□□□□□ -0.27
CCDC144A-206ENST00000399273 TSPY8P0CW00 308 aa13.34□□□□□ -0.27
CCDC144A-206ENST00000399273 CAMK4Q16566 473 aa13.34□□□□□ -0.27
CCDC144A-206ENST00000399273 VAT1LQ9HCJ6 419 aa13.34□□□□□ -0.27
CCDC144A-206ENST00000399273 PPP1R14CQ8TAE6 165 aa13.34□□□□□ -0.27
CCDC144A-206ENST00000399273 ARL1P40616 181 aaPredicted RBP13.34□□□□□ -0.27
CCDC144A-206ENST00000399273 TRMT1LQ7Z2T5 733 aaKnown RBP13.34□□□□□ -0.27
CCDC144A-206ENST00000399273 TOPBP1Q92547 1522 aa13.33□□□□□ -0.27
CCDC144A-206ENST00000399273 PTPRCP08575 1304 aa13.33□□□□□ -0.27
CCDC144A-206ENST00000399273 LAMC3Q9Y6N6 1575 aa13.33□□□□□ -0.28
CCDC144A-206ENST00000399273 TAF12Q16514 161 aa13.33□□□□□ -0.28
CCDC144A-206ENST00000399273 CIZ1Q9ULV3 898 aaPredicted RBP13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms