RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 MAGEC2Q9UBF1 373 aaPredicted RBP16.69■□□□□ 0.26
PCDHGA11-201ENST00000398587 RNF123Q5XPI4 1314 aa16.69■□□□□ 0.26
PCDHGA11-201ENST00000398587 ESYT1Q9BSJ8 1104 aa16.69■□□□□ 0.26
PCDHGA11-201ENST00000398587 SBNO1A3KN83 1393 aa16.68■□□□□ 0.26
PCDHGA11-201ENST00000398587 EPS15P42566 896 aa16.68■□□□□ 0.26
PCDHGA11-201ENST00000398587 NGLY1Q96IV0 654 aa16.68■□□□□ 0.26
PCDHGA11-201ENST00000398587 TRIM35Q9UPQ4 493 aa16.68■□□□□ 0.26
PCDHGA11-201ENST00000398587 MINDY4BA8MYZ0 360 aa16.68■□□□□ 0.26
PCDHGA11-201ENST00000398587 TTF1Q15361 905 aaPredicted RBP16.68■□□□□ 0.26
PCDHGA11-201ENST00000398587 C8orf76Q96K31 380 aa16.68■□□□□ 0.26
PCDHGA11-201ENST00000398587 BABAM1Q9NWV8 329 aa16.68■□□□□ 0.26
PCDHGA11-201ENST00000398587 CCDC183Q5T5S1 534 aa16.68■□□□□ 0.26
PCDHGA11-201ENST00000398587 ZNF287Q9HBT7 754 aa16.68■□□□□ 0.26
PCDHGA11-201ENST00000398587 STIM1Q13586 685 aa16.67■□□□□ 0.26
PCDHGA11-201ENST00000398587 RNF41Q9H4P4 317 aaPredicted RBP16.67■□□□□ 0.26
PCDHGA11-201ENST00000398587 ZBTB7BO15156 539 aaPredicted RBP16.67■□□□□ 0.26
PCDHGA11-201ENST00000398587 CCAR1Q8IX12 1150 aaKnown RBP16.67■□□□□ 0.26
PCDHGA11-201ENST00000398587 JARID2Q92833 1246 aaPredicted RBP16.67■□□□□ 0.26
PCDHGA11-201ENST00000398587 BAG4O95429 457 aaKnown RBP16.67■□□□□ 0.26
PCDHGA11-201ENST00000398587 C16orf71Q8IYS4 520 aaPredicted RBP16.67■□□□□ 0.26
PCDHGA11-201ENST00000398587 CDC5LQ99459 802 aaKnown RBP16.67■□□□□ 0.26
PCDHGA11-201ENST00000398587 SNRKQ9NRH2 765 aa16.67■□□□□ 0.26
PCDHGA11-201ENST00000398587 NAP1L1P55209 391 aaKnown RBP16.66■□□□□ 0.26
PCDHGA11-201ENST00000398587 SNX21Q969T3 373 aa16.66■□□□□ 0.26
PCDHGA11-201ENST00000398587 SIRT1Q96EB6 747 aa16.66■□□□□ 0.26
PCDHGA11-201ENST00000398587 STX6O43752 255 aa16.66■□□□□ 0.26
PCDHGA11-201ENST00000398587 CHL1O00533 1208 aa16.66■□□□□ 0.26
PCDHGA11-201ENST00000398587 MTERF4Q7Z6M4 381 aaKnown RBP16.66■□□□□ 0.26
PCDHGA11-201ENST00000398587 NEK1Q96PY6 1258 aa16.66■□□□□ 0.26
PCDHGA11-201ENST00000398587 CEP131Q9UPN4 1083 aa16.66■□□□□ 0.26
PCDHGA11-201ENST00000398587 SAMD9LQ8IVG5 1584 aa16.66■□□□□ 0.26
PCDHGA11-201ENST00000398587 PLEKHG3A1L390 1219 aa16.66■□□□□ 0.26
PCDHGA11-201ENST00000398587 BRPF1P55201 1214 aaPredicted RBP16.66■□□□□ 0.26
PCDHGA11-201ENST00000398587 LMBR1LQ6UX01 489 aa16.66■□□□□ 0.26
PCDHGA11-201ENST00000398587 NFATC2IPQ8NCF5 419 aa16.66■□□□□ 0.26
PCDHGA11-201ENST00000398587 CFAP65Q6ZU64 1925 aaKnown RBP16.66■□□□□ 0.26
PCDHGA11-201ENST00000398587 KDM6BO15054 1643 aa16.66■□□□□ 0.26
PCDHGA11-201ENST00000398587 CBFA2T2O43439 604 aa16.65■□□□□ 0.26
PCDHGA11-201ENST00000398587 TMX3Q96JJ7 454 aa16.65■□□□□ 0.26
PCDHGA11-201ENST00000398587 DCAF5Q96JK2 942 aa16.65■□□□□ 0.26
PCDHGA11-201ENST00000398587 IQCA1Q86XH1 822 aa16.65■□□□□ 0.26
PCDHGA11-201ENST00000398587 MPNDQ8N594 471 aa16.65■□□□□ 0.26
PCDHGA11-201ENST00000398587 KRT18P05783 430 aaKnown RBP16.65■□□□□ 0.26
PCDHGA11-201ENST00000398587 MAP7D2Q96T17 732 aa16.65■□□□□ 0.26
PCDHGA11-201ENST00000398587 LARP6Q9BRS8 491 aaKnown RBP16.65■□□□□ 0.26
PCDHGA11-201ENST00000398587 TMEM2Q9UHN6 1383 aa16.64■□□□□ 0.25
PCDHGA11-201ENST00000398587 SF3B2Q13435 895 aaKnown RBP16.64■□□□□ 0.25
PCDHGA11-201ENST00000398587 CABLES1Q8TDN4 633 aa16.64■□□□□ 0.25
PCDHGA11-201ENST00000398587 SMTNL1A8MU46 457 aa16.64■□□□□ 0.25
PCDHGA11-201ENST00000398587 RNMTO43148 476 aaKnown RBP16.64■□□□□ 0.25
PCDHGA11-201ENST00000398587 GJB2P29033 226 aa16.64■□□□□ 0.25
PCDHGA11-201ENST00000398587 IL15P40933 162 aaPredicted RBP16.64■□□□□ 0.25
PCDHGA11-201ENST00000398587 PLEKHM2Q8IWE5 1019 aa16.64■□□□□ 0.25
PCDHGA11-201ENST00000398587 TTC41PQ6P2S7 1318 aa16.64■□□□□ 0.25
PCDHGA11-201ENST00000398587 USP5P45974 858 aa16.64■□□□□ 0.25
PCDHGA11-201ENST00000398587 RBM5P52756 815 aaKnown RBP eCLIP16.64■□□□□ 0.25
PCDHGA11-201ENST00000398587 PLXNC1O60486 1568 aa16.63■□□□□ 0.25
PCDHGA11-201ENST00000398587 GOLGA8BA8MQT2 603 aa16.63■□□□□ 0.25
PCDHGA11-201ENST00000398587 ZFYP08048 801 aaPredicted RBP16.63■□□□□ 0.25
PCDHGA11-201ENST00000398587 DDX46Q7L014 1031 aaKnown RBP16.63■□□□□ 0.25
PCDHGA11-201ENST00000398587 DZIP1Q86YF9 867 aaKnown RBP16.63■□□□□ 0.25
PCDHGA11-201ENST00000398587 UQCRFS1P1P0C7P4 283 aa16.63■□□□□ 0.25
PCDHGA11-201ENST00000398587 PPFIBP1Q86W92 1011 aa16.63■□□□□ 0.25
PCDHGA11-201ENST00000398587 CTCFLQ8NI51 663 aaPredicted RBP16.63■□□□□ 0.25
PCDHGA11-201ENST00000398587 SLC12A7Q9Y666 1083 aa16.63■□□□□ 0.25
PCDHGA11-201ENST00000398587 IFIT3O14879 490 aaKnown RBP16.63■□□□□ 0.25
PCDHGA11-201ENST00000398587 HOXB7P09629 217 aa16.63■□□□□ 0.25
PCDHGA11-201ENST00000398587 IL2RBP14784 551 aa16.63■□□□□ 0.25
PCDHGA11-201ENST00000398587 DDX21Q9NR30 783 aaKnown RBP eCLIP16.63■□□□□ 0.25
PCDHGA11-201ENST00000398587 ZSCAN29Q8IWY8 852 aaPredicted RBP16.63■□□□□ 0.25
PCDHGA11-201ENST00000398587 ZSCAN30Q86W11 494 aa16.62■□□□□ 0.25
PCDHGA11-201ENST00000398587 MKNK2Q9HBH9 465 aa16.62■□□□□ 0.25
PCDHGA11-201ENST00000398587 ANKIB1Q9P2G1 1089 aa16.62■□□□□ 0.25
PCDHGA11-201ENST00000398587 CAMK4Q16566 473 aa16.62■□□□□ 0.25
PCDHGA11-201ENST00000398587 KLHL40Q2TBA0 621 aa16.62■□□□□ 0.25
PCDHGA11-201ENST00000398587 CCT2P78371 535 aaKnown RBP16.62■□□□□ 0.25
PCDHGA11-201ENST00000398587 ZNHIT6Q9NWK9 470 aaKnown RBP16.62■□□□□ 0.25
PCDHGA11-201ENST00000398587 POLR3DP05423 398 aaPredicted RBP16.61■□□□□ 0.25
PCDHGA11-201ENST00000398587 GUCY1B3Q02153 619 aa16.61■□□□□ 0.25
PCDHGA11-201ENST00000398587 TEX35Q5T0J7 233 aa16.61■□□□□ 0.25
PCDHGA11-201ENST00000398587 FILIP1Q7Z7B0 1213 aa16.61■□□□□ 0.25
PCDHGA11-201ENST00000398587 ANO10Q9NW15 660 aa16.61■□□□□ 0.25
PCDHGA11-201ENST00000398587 RANBP6O60518 1105 aaKnown RBP16.61■□□□□ 0.25
PCDHGA11-201ENST00000398587 ANO8Q9HCE9 1232 aaPredicted RBP16.61■□□□□ 0.25
PCDHGA11-201ENST00000398587 DDX19AQ9NUU7 478 aaKnown RBP16.61■□□□□ 0.25
PCDHGA11-201ENST00000398587 PA2G4Q9UQ80 394 aaKnown RBP16.61■□□□□ 0.25
PCDHGA11-201ENST00000398587 RBM8AQ9Y5S9 174 aaKnown RBP16.61■□□□□ 0.25
PCDHGA11-201ENST00000398587 CTAGE5O15320 804 aa16.61■□□□□ 0.25
PCDHGA11-201ENST00000398587 CWF19L2Q2TBE0 894 aaKnown RBP16.61■□□□□ 0.25
PCDHGA11-201ENST00000398587 ACBD3Q9H3P7 528 aa16.61■□□□□ 0.25
PCDHGA11-201ENST00000398587 PHAXQ9H814 394 aaKnown RBP16.61■□□□□ 0.25
PCDHGA11-201ENST00000398587 KDM5DQ9BY66 1539 aa16.6■□□□□ 0.25
PCDHGA11-201ENST00000398587 GOLGA8AA7E2F4 631 aa16.6■□□□□ 0.25
PCDHGA11-201ENST00000398587 ATP2B3Q16720 1220 aa16.6■□□□□ 0.25
PCDHGA11-201ENST00000398587 G2E3Q7L622 706 aa16.6■□□□□ 0.25
PCDHGA11-201ENST00000398587 USP16Q9Y5T5 823 aa16.6■□□□□ 0.25
PCDHGA11-201ENST00000398587 ZFYVE16Q7Z3T8 1539 aa16.6■□□□□ 0.25
PCDHGA11-201ENST00000398587 GDPD2Q9HCC8 539 aa16.6■□□□□ 0.25
PCDHGA11-201ENST00000398587 NCOA7Q8NI08 942 aa16.6■□□□□ 0.25
PCDHGA11-201ENST00000398587 YEATS2Q9ULM3 1422 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms